RNA–Protein interactions for RNA: ENSMUST00000176630.7

Tcof1-204, Transcript of Treacle protein, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Tcof1, Length 4,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1-204ENSMUST00000176630 Rhox8Q6VSS7 320 aa19.93■□□□□ 0.78
Tcof1-204ENSMUST00000176630 NischQ80TM9 1593 aa19.29■□□□□ 0.68
Tcof1-204ENSMUST00000176630 Rpgrip1Q9EPQ2 1331 aa18.56■□□□□ 0.56
Tcof1-204ENSMUST00000176630 Abcc9P70170 1546 aa18.39■□□□□ 0.53
Tcof1-204ENSMUST00000176630 Ehmt2Q9Z148 1263 aaKnown RBP18.07■□□□□ 0.48
Tcof1-204ENSMUST00000176630 Ccdc136Q3TVA9 1136 aa18.06■□□□□ 0.48
Tcof1-204ENSMUST00000176630 Rtl1Q7M732 1744 aa18.05■□□□□ 0.48
Tcof1-204ENSMUST00000176630 Ccdc180J3QNE4 1664 aa18.04■□□□□ 0.48
Tcof1-204ENSMUST00000176630 Abcc8B2RUS7 1588 aa17.94■□□□□ 0.46
Tcof1-204ENSMUST00000176630 Gm35339A0A140LHH9 1649 aa17.81■□□□□ 0.44
Tcof1-204ENSMUST00000176630 Acin1Q9JIX8 1338 aaKnown RBP17.71■□□□□ 0.43
Tcof1-204ENSMUST00000176630 Trim41Q5NCC3 630 aa17.71■□□□□ 0.43
Tcof1-204ENSMUST00000176630 HrcG5E8J6 738 aa17.64■□□□□ 0.41
Tcof1-204ENSMUST00000176630 Cngb1E1AZ71 1325 aa17.55■□□□□ 0.4
Tcof1-204ENSMUST00000176630 Gab3Q8BSM5 595 aa17.42■□□□□ 0.38
Tcof1-204ENSMUST00000176630 Esf1Q3V1V3 845 aaKnown RBP17.38■□□□□ 0.37
Tcof1-204ENSMUST00000176630 Zeb1Q64318 1117 aa17.22■□□□□ 0.35
Tcof1-204ENSMUST00000176630 Zcchc6Q5BLK4 1491 aaKnown RBP17.17■□□□□ 0.34
Tcof1-204ENSMUST00000176630 Las1lA2BE28 776 aaKnown RBP17.12■□□□□ 0.33
Tcof1-204ENSMUST00000176630 Pcgf6Q99NA9 353 aa17.08■□□□□ 0.32
Tcof1-204ENSMUST00000176630 NefmP08553 848 aa17.07■□□□□ 0.32
Tcof1-204ENSMUST00000176630 Wdr66E9Q743 1299 aa17.07■□□□□ 0.32
Tcof1-204ENSMUST00000176630 Npm2Q80W85 207 aa16.94■□□□□ 0.3
Tcof1-204ENSMUST00000176630 Rb1cc1Q9ESK9 1588 aa16.94■□□□□ 0.3
Tcof1-204ENSMUST00000176630 Dcaf1Q80TR8 1506 aa16.94■□□□□ 0.3
Tcof1-204ENSMUST00000176630 Myt1lP97500 1187 aa16.92■□□□□ 0.3
Tcof1-204ENSMUST00000176630 UbtfP25976 765 aaKnown RBP16.84■□□□□ 0.29
Tcof1-204ENSMUST00000176630 Supt5hO55201 1082 aaKnown RBP16.76■□□□□ 0.27
Tcof1-204ENSMUST00000176630 Cep164Q5DU05 1446 aa16.74■□□□□ 0.27
Tcof1-204ENSMUST00000176630 Baz1aO88379 1555 aa16.67■□□□□ 0.26
Tcof1-204ENSMUST00000176630 Mier1Q5UAK0 511 aa16.62■□□□□ 0.25
Tcof1-204ENSMUST00000176630 Brd4Q9ESU6 1400 aaKnown RBP16.59■□□□□ 0.25
Tcof1-204ENSMUST00000176630 NacadQ5SWP3 1504 aa16.58■□□□□ 0.24
Tcof1-204ENSMUST00000176630 Chic1Q8CBW7 227 aa16.56■□□□□ 0.24
Tcof1-204ENSMUST00000176630 Ube2uB1AUC4 352 aa16.47■□□□□ 0.23
Tcof1-204ENSMUST00000176630 Cdk11bP24788 784 aaKnown RBP16.46■□□□□ 0.23
Tcof1-204ENSMUST00000176630 Kdm5dQ62240 1548 aa16.46■□□□□ 0.22
Tcof1-204ENSMUST00000176630 CenpbP27790 599 aa16.39■□□□□ 0.21
Tcof1-204ENSMUST00000176630 Il27Q8K3I6 234 aa16.38■□□□□ 0.21
Tcof1-204ENSMUST00000176630 Nop58Q6DFW4 536 aaKnown RBP16.37■□□□□ 0.21
Tcof1-204ENSMUST00000176630 TonslQ6NZL6 1363 aa16.33■□□□□ 0.2
Tcof1-204ENSMUST00000176630 Neurod1Q60867 357 aa16.27■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Ppargc1bQ8VHJ7 1014 aa16.26■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Golga3P55937 1487 aa16.26■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Ap3b1Q9Z1T1 1105 aa16.26■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Sall2Q9QX96 1004 aa16.25■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Stra8P70278 393 aa16.23■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Rsf1E9PWW9 1441 aaKnown RBP16.22■□□□□ 0.19
Tcof1-204ENSMUST00000176630 ClspnQ80YR7 1315 aa16.22■□□□□ 0.19
Tcof1-204ENSMUST00000176630 Plekhg3Q4VAC9 1341 aa16.19■□□□□ 0.18
Tcof1-204ENSMUST00000176630 ScribQ80U72 1612 aa16.19■□□□□ 0.18
Tcof1-204ENSMUST00000176630 Pelp1Q9DBD5 1123 aaKnown RBP16.15■□□□□ 0.18
Tcof1-204ENSMUST00000176630 Fam50aQ9WV03 339 aaKnown RBP16.15■□□□□ 0.18
Tcof1-204ENSMUST00000176630 Crybg2B7ZCC2 1516 aa16.13■□□□□ 0.17
Tcof1-204ENSMUST00000176630 Clip1Q922J3 1391 aa16.11■□□□□ 0.17
Tcof1-204ENSMUST00000176630 Tnnt3Q9QZ47 272 aa16.08■□□□□ 0.17
Tcof1-204ENSMUST00000176630 NclP09405 707 aaKnown RBP16.07■□□□□ 0.16
Tcof1-204ENSMUST00000176630 Anks4bQ8K3X6 423 aa16.06■□□□□ 0.16
Tcof1-204ENSMUST00000176630 Smarca2Q6DIC0 1577 aa16.05■□□□□ 0.16
Tcof1-204ENSMUST00000176630 Ccdc88bQ4QRL3 1481 aa16.02■□□□□ 0.15
Tcof1-204ENSMUST00000176630 Slc24a1Q91WD8 1130 aa15.99■□□□□ 0.15
Tcof1-204ENSMUST00000176630 Sycp2Q9CUU3 1500 aa15.99■□□□□ 0.15
Tcof1-204ENSMUST00000176630 Myt1Q8CFC2 1127 aa15.97■□□□□ 0.15
Tcof1-204ENSMUST00000176630 Eid3Q3V124 375 aa15.91■□□□□ 0.14
Tcof1-204ENSMUST00000176630 Lmod2Q3UHZ5 550 aa15.9■□□□□ 0.14
Tcof1-204ENSMUST00000176630 Csrnp3P59055 597 aa15.88■□□□□ 0.13
Tcof1-204ENSMUST00000176630 Npm1Q61937 292 aaKnown RBP15.87■□□□□ 0.13
Tcof1-204ENSMUST00000176630 Aebp2Q9Z248 504 aaKnown RBP15.86■□□□□ 0.13
Tcof1-204ENSMUST00000176630 Cecr2E9Q2Z1 1453 aa15.83■□□□□ 0.13
Tcof1-204ENSMUST00000176630 CftrP26361 1476 aa15.79■□□□□ 0.12
Tcof1-204ENSMUST00000176630 Aplp2Q06335 707 aa15.78■□□□□ 0.12
Tcof1-204ENSMUST00000176630 NrdcQ8BHG1 1161 aa15.77■□□□□ 0.12
Tcof1-204ENSMUST00000176630 Fmn1Q05860 1466 aa15.74■□□□□ 0.11
Tcof1-204ENSMUST00000176630 Setd5Q5XJV7 1441 aa15.74■□□□□ 0.11
Tcof1-204ENSMUST00000176630 Synj1Q8CHC4 1574 aa15.74■□□□□ 0.11
Tcof1-204ENSMUST00000176630 Cep162Q6ZQ06 1403 aa15.73■□□□□ 0.11
Tcof1-204ENSMUST00000176630 Ccer2J3QPU5 274 aa15.71■□□□□ 0.11
Tcof1-204ENSMUST00000176630 Mapk8ip2Q9ERE9 830 aa15.71■□□□□ 0.11
Tcof1-204ENSMUST00000176630 BlmO88700 1416 aa15.69■□□□□ 0.1
Tcof1-204ENSMUST00000176630 Eea1Q8BL66 1411 aa15.69■□□□□ 0.1
Tcof1-204ENSMUST00000176630 Eif5bQ05D44 1216 aaKnown RBP15.67■□□□□ 0.1
Tcof1-204ENSMUST00000176630 Ubl4bQ9CQ84 188 aa15.66■□□□□ 0.1
Tcof1-204ENSMUST00000176630 Gm38655A0A286YDK6 273 aa15.65■□□□□ 0.1
Tcof1-204ENSMUST00000176630 1700123L14RikQ3V2K7 440 aa15.64■□□□□ 0.09
Tcof1-204ENSMUST00000176630 Kif15Q6P9L6 1387 aa15.62■□□□□ 0.09
Tcof1-204ENSMUST00000176630 Anp32aO35381 247 aa15.58■□□□□ 0.09
Tcof1-204ENSMUST00000176630 Anp32bQ9EST5 272 aaKnown RBP15.58■□□□□ 0.08
Tcof1-204ENSMUST00000176630 Rapgef2Q8CHG7 1496 aa15.55■□□□□ 0.08
Tcof1-204ENSMUST00000176630 Cttnbp2B9EJA2 1648 aa15.53■□□□□ 0.08
Tcof1-204ENSMUST00000176630 Rtl5Q5DTT4 599 aa15.52■□□□□ 0.08
Tcof1-204ENSMUST00000176630 Ccdc18Q640L5 1455 aa15.5■□□□□ 0.07
Tcof1-204ENSMUST00000176630 Smarca4Q3TKT4 1613 aaKnown RBP15.48■□□□□ 0.07
Tcof1-204ENSMUST00000176630 Pds5bQ4VA53 1446 aaKnown RBP15.46■□□□□ 0.07
Tcof1-204ENSMUST00000176630 Chic2Q9D9G3 165 aa15.46■□□□□ 0.07
Tcof1-204ENSMUST00000176630 Ercc6F8VPZ5 1481 aa15.46■□□□□ 0.06
Tcof1-204ENSMUST00000176630 NeflP08551 543 aa15.43■□□□□ 0.06
Tcof1-204ENSMUST00000176630 Calr4Q3TQS0 420 aa15.41■□□□□ 0.06
Tcof1-204ENSMUST00000176630 Mia2Q91ZV0 1396 aa15.35■□□□□ 0.05
Tcof1-204ENSMUST00000176630 Atad2bE9Q166 1460 aaKnown RBP15.34■□□□□ 0.05
Tcof1-204ENSMUST00000176630 Mrs2Q5NCE8 434 aa15.32■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms