RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Rhox8Q6VSS7 320 aa19.48■□□□□ 0.71
Cux1-204ENSMUST00000175975 Cngb1E1AZ71 1325 aa18.94■□□□□ 0.62
Cux1-204ENSMUST00000175975 Rpgrip1Q9EPQ2 1331 aa18.86■□□□□ 0.61
Cux1-204ENSMUST00000175975 Pelp1Q9DBD5 1123 aaKnown RBP18.8■□□□□ 0.6
Cux1-204ENSMUST00000175975 Las1lA2BE28 776 aaKnown RBP18.51■□□□□ 0.55
Cux1-204ENSMUST00000175975 Wdr66E9Q743 1299 aa18.1■□□□□ 0.49
Cux1-204ENSMUST00000175975 Ube2uB1AUC4 352 aa17.7■□□□□ 0.42
Cux1-204ENSMUST00000175975 4930567H17RikQ3V0K5 233 aa17.66■□□□□ 0.42
Cux1-204ENSMUST00000175975 Stra8P70278 393 aa17.55■□□□□ 0.4
Cux1-204ENSMUST00000175975 Amer1Q7TS75 1132 aa17.54■□□□□ 0.4
Cux1-204ENSMUST00000175975 Esf1Q3V1V3 845 aaKnown RBP17.45■□□□□ 0.38
Cux1-204ENSMUST00000175975 Rtl1Q7M732 1744 aa17.44■□□□□ 0.38
Cux1-204ENSMUST00000175975 Zeb1Q64318 1117 aa17.33■□□□□ 0.36
Cux1-204ENSMUST00000175975 CenpbP27790 599 aa17.27■□□□□ 0.35
Cux1-204ENSMUST00000175975 Npm2Q80W85 207 aa17.19■□□□□ 0.34
Cux1-204ENSMUST00000175975 Trim41Q5NCC3 630 aa17.12■□□□□ 0.33
Cux1-204ENSMUST00000175975 Ehmt2Q9Z148 1263 aaKnown RBP17.07■□□□□ 0.32
Cux1-204ENSMUST00000175975 Myt1Q8CFC2 1127 aa17■□□□□ 0.31
Cux1-204ENSMUST00000175975 Ccdc180J3QNE4 1664 aa16.96■□□□□ 0.3
Cux1-204ENSMUST00000175975 Anp32bQ9EST5 272 aaKnown RBP16.95■□□□□ 0.3
Cux1-204ENSMUST00000175975 NefmP08553 848 aa16.93■□□□□ 0.3
Cux1-204ENSMUST00000175975 Ccdc136Q3TVA9 1136 aa16.89■□□□□ 0.29
Cux1-204ENSMUST00000175975 NeflP08551 543 aa16.85■□□□□ 0.29
Cux1-204ENSMUST00000175975 Myt1lP97500 1187 aa16.76■□□□□ 0.27
Cux1-204ENSMUST00000175975 4933416C03RikQ3V063 378 aa16.69■□□□□ 0.26
Cux1-204ENSMUST00000175975 Tnnt3Q9QZ47 272 aa16.68■□□□□ 0.26
Cux1-204ENSMUST00000175975 Gab3Q8BSM5 595 aa16.68■□□□□ 0.26
Cux1-204ENSMUST00000175975 NrdcQ8BHG1 1161 aa16.62■□□□□ 0.25
Cux1-204ENSMUST00000175975 Rtl5Q5DTT4 599 aa16.61■□□□□ 0.25
Cux1-204ENSMUST00000175975 Slc24a1Q91WD8 1130 aa16.53■□□□□ 0.24
Cux1-204ENSMUST00000175975 Ttbk1Q6PCN3 1308 aa16.45■□□□□ 0.22
Cux1-204ENSMUST00000175975 Acin1Q9JIX8 1338 aaKnown RBP16.43■□□□□ 0.22
Cux1-204ENSMUST00000175975 Cdk11bP24788 784 aaKnown RBP16.4■□□□□ 0.22
Cux1-204ENSMUST00000175975 UbtfP25976 765 aaKnown RBP16.37■□□□□ 0.21
Cux1-204ENSMUST00000175975 Os9Q8K2C7 672 aa16.35■□□□□ 0.21
Cux1-204ENSMUST00000175975 NischQ80TM9 1593 aa16.33■□□□□ 0.2
Cux1-204ENSMUST00000175975 HrcG5E8J6 738 aa16.3■□□□□ 0.2
Cux1-204ENSMUST00000175975 NclP09405 707 aaKnown RBP16.24■□□□□ 0.19
Cux1-204ENSMUST00000175975 Hdac5Q9Z2V6 1113 aa16.19■□□□□ 0.18
Cux1-204ENSMUST00000175975 Fam50aQ9WV03 339 aaKnown RBP16.06■□□□□ 0.16
Cux1-204ENSMUST00000175975 Nop58Q6DFW4 536 aaKnown RBP16.06■□□□□ 0.16
Cux1-204ENSMUST00000175975 Eif5bQ05D44 1216 aaKnown RBP16■□□□□ 0.15
Cux1-204ENSMUST00000175975 Neurod1Q60867 357 aa15.99■□□□□ 0.15
Cux1-204ENSMUST00000175975 DiexfQ8BTT6 772 aaKnown RBP15.99■□□□□ 0.15
Cux1-204ENSMUST00000175975 TonslQ6NZL6 1363 aa15.89■□□□□ 0.13
Cux1-204ENSMUST00000175975 CatipB9EKE5 520 aa15.88■□□□□ 0.13
Cux1-204ENSMUST00000175975 Il27Q8K3I6 234 aa15.87■□□□□ 0.13
Cux1-204ENSMUST00000175975 Ythdc1E9Q5K9 736 aaKnown RBP15.86■□□□□ 0.13
Cux1-204ENSMUST00000175975 Gm13697A2AK42 830 aa15.85■□□□□ 0.13
Cux1-204ENSMUST00000175975 DaxxO35613 739 aa15.83■□□□□ 0.12
Cux1-204ENSMUST00000175975 Hsp90aa1P07901 733 aaKnown RBP15.79■□□□□ 0.12
Cux1-204ENSMUST00000175975 Anp32aO35381 247 aa15.77■□□□□ 0.11
Cux1-204ENSMUST00000175975 Nlrp6Q91WS2 869 aa15.76■□□□□ 0.11
Cux1-204ENSMUST00000175975 Upf2A2AT37 1269 aaKnown RBP15.75■□□□□ 0.11
Cux1-204ENSMUST00000175975 Ccdc9Q8VC31 543 aaKnown RBP15.64■□□□□ 0.09
Cux1-204ENSMUST00000175975 Pcgf6Q99NA9 353 aa15.63■□□□□ 0.09
Cux1-204ENSMUST00000175975 Ap3b1Q9Z1T1 1105 aa15.6■□□□□ 0.09
Cux1-204ENSMUST00000175975 Gm13695A2AK44 830 aa15.6■□□□□ 0.09
Cux1-204ENSMUST00000175975 Hnrnpul2Q00PI9 745 aaKnown RBP15.58■□□□□ 0.08
Cux1-204ENSMUST00000175975 Atp1b4Q99ME6 356 aa15.56■□□□□ 0.08
Cux1-204ENSMUST00000175975 Zcchc6Q5BLK4 1491 aaKnown RBP15.54■□□□□ 0.08
Cux1-204ENSMUST00000175975 ClspnQ80YR7 1315 aa15.52■□□□□ 0.07
Cux1-204ENSMUST00000175975 Znf326O88291 580 aa15.48■□□□□ 0.07
Cux1-204ENSMUST00000175975 Npm1Q61937 292 aaKnown RBP15.46■□□□□ 0.07
Cux1-204ENSMUST00000175975 Polr3glQ8R0C0 218 aa15.46■□□□□ 0.07
Cux1-204ENSMUST00000175975 Ccer2J3QPU5 274 aa15.42■□□□□ 0.06
Cux1-204ENSMUST00000175975 Supt5hO55201 1082 aaKnown RBP15.41■□□□□ 0.06
Cux1-204ENSMUST00000175975 Trim44Q9QXA7 346 aa15.41■□□□□ 0.06
Cux1-204ENSMUST00000175975 Adam1bQ8R534 806 aa15.41■□□□□ 0.06
Cux1-204ENSMUST00000175975 Chic1Q8CBW7 227 aa15.4■□□□□ 0.06
Cux1-204ENSMUST00000175975 Erich6D3Z6S9 713 aa15.38■□□□□ 0.05
Cux1-204ENSMUST00000175975 Zbtb7cQ8VCZ7 619 aa15.32■□□□□ 0.04
Cux1-204ENSMUST00000175975 Zfp777B9EKF4 885 aa15.26■□□□□ 0.03
Cux1-204ENSMUST00000175975 Lmod3E9QA62 571 aa15.25■□□□□ 0.03
Cux1-204ENSMUST00000175975 Fgd1P52734 960 aa15.25■□□□□ 0.03
Cux1-204ENSMUST00000175975 Clstn2Q9ER65 966 aa15.25■□□□□ 0.03
Cux1-204ENSMUST00000175975 DekQ7TNV0 380 aaKnown RBP15.23■□□□□ 0.03
Cux1-204ENSMUST00000175975 PnnO35691 725 aaKnown RBP15.23■□□□□ 0.03
Cux1-204ENSMUST00000175975 Chmp4bQ9D8B3 224 aaKnown RBP15.19■□□□□ 0.02
Cux1-204ENSMUST00000175975 Mier1Q5UAK0 511 aa15.19■□□□□ 0.02
Cux1-204ENSMUST00000175975 ArxO35085 564 aa15.18■□□□□ 0.02
Cux1-204ENSMUST00000175975 Htatsf1Q8BGC0 757 aa15.17■□□□□ 0.02
Cux1-204ENSMUST00000175975 Gm35339A0A140LHH9 1649 aa15.11■□□□□ 0.01
Cux1-204ENSMUST00000175975 Lmod2Q3UHZ5 550 aa15.09■□□□□ 0.01
Cux1-204ENSMUST00000175975 Calcoco2A2A6M5 331 aa15.09■□□□□ 0.01
Cux1-204ENSMUST00000175975 PtmaP26350 111 aa15.09■□□□□ 0.01
Cux1-204ENSMUST00000175975 Safb2Q80YR5 991 aaKnown RBP15.09■□□□□ 0.01
Cux1-204ENSMUST00000175975 Calr4Q3TQS0 420 aa15.08■□□□□ 0
Cux1-204ENSMUST00000175975 Abcc9P70170 1546 aa15.07■□□□□ 0
Cux1-204ENSMUST00000175975 Gm973E9Q295 1059 aa15.05■□□□□ 0
Cux1-204ENSMUST00000175975 Ifnlr1Q8CGK5 535 aa15.05■□□□□ 0
Cux1-204ENSMUST00000175975 Ppargc1bQ8VHJ7 1014 aa15.05■□□□□ -0
Cux1-204ENSMUST00000175975 Brd4Q9ESU6 1400 aaKnown RBP15.04■□□□□ -0
Cux1-204ENSMUST00000175975 Zbtb4Q5F293 982 aa15.03■□□□□ -0
Cux1-204ENSMUST00000175975 Eif4g2Q62448 906 aaKnown RBP15.03■□□□□ -0
Cux1-204ENSMUST00000175975 Wdr43Q6ZQL4 677 aaKnown RBP15.03■□□□□ -0
Cux1-204ENSMUST00000175975 Prdm10Q3UTQ7 1184 aa15.03■□□□□ -0
Cux1-204ENSMUST00000175975 Plekhg3Q4VAC9 1341 aa15.01□□□□□ -0.01
Cux1-204ENSMUST00000175975 Aplp2Q06335 707 aa15.01□□□□□ -0.01
Cux1-204ENSMUST00000175975 Hsp90ab1P11499 724 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms