RNA–Protein interactions for RNA: ENSMUST00000155195.2

Synpo-211, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-211ENSMUST00000155195 Rhox8Q6VSS7 320 aa22.23■■□□□ 1.15
Synpo-211ENSMUST00000155195 NischQ80TM9 1593 aa21.11■□□□□ 0.97
Synpo-211ENSMUST00000155195 Ccdc136Q3TVA9 1136 aa20.13■□□□□ 0.81
Synpo-211ENSMUST00000155195 Abcc9P70170 1546 aa19.95■□□□□ 0.78
Synpo-211ENSMUST00000155195 Ehmt2Q9Z148 1263 aaKnown RBP19.73■□□□□ 0.75
Synpo-211ENSMUST00000155195 Cngb1E1AZ71 1325 aa19.6■□□□□ 0.73
Synpo-211ENSMUST00000155195 Abcc8B2RUS7 1588 aa19.6■□□□□ 0.73
Synpo-211ENSMUST00000155195 Esf1Q3V1V3 845 aaKnown RBP19.58■□□□□ 0.73
Synpo-211ENSMUST00000155195 Trim41Q5NCC3 630 aa19.57■□□□□ 0.72
Synpo-211ENSMUST00000155195 Rpgrip1Q9EPQ2 1331 aa19.37■□□□□ 0.69
Synpo-211ENSMUST00000155195 Gab3Q8BSM5 595 aa19.36■□□□□ 0.69
Synpo-211ENSMUST00000155195 Gm35339A0A140LHH9 1649 aa19.19■□□□□ 0.66
Synpo-211ENSMUST00000155195 Zcchc6Q5BLK4 1491 aaKnown RBP19.08■□□□□ 0.64
Synpo-211ENSMUST00000155195 Ccdc180J3QNE4 1664 aa19.07■□□□□ 0.64
Synpo-211ENSMUST00000155195 Rtl1Q7M732 1744 aa18.97■□□□□ 0.63
Synpo-211ENSMUST00000155195 Npm2Q80W85 207 aa18.96■□□□□ 0.63
Synpo-211ENSMUST00000155195 HrcG5E8J6 738 aa18.93■□□□□ 0.62
Synpo-211ENSMUST00000155195 Myt1lP97500 1187 aa18.91■□□□□ 0.62
Synpo-211ENSMUST00000155195 Zeb1Q64318 1117 aa18.89■□□□□ 0.61
Synpo-211ENSMUST00000155195 Acin1Q9JIX8 1338 aaKnown RBP18.65■□□□□ 0.58
Synpo-211ENSMUST00000155195 Il27Q8K3I6 234 aa18.6■□□□□ 0.57
Synpo-211ENSMUST00000155195 Wdr66E9Q743 1299 aa18.56■□□□□ 0.56
Synpo-211ENSMUST00000155195 Las1lA2BE28 776 aaKnown RBP18.54■□□□□ 0.56
Synpo-211ENSMUST00000155195 UbtfP25976 765 aaKnown RBP18.52■□□□□ 0.56
Synpo-211ENSMUST00000155195 Rb1cc1Q9ESK9 1588 aa18.51■□□□□ 0.55
Synpo-211ENSMUST00000155195 Ube2uB1AUC4 352 aa18.48■□□□□ 0.55
Synpo-211ENSMUST00000155195 NacadQ5SWP3 1504 aa18.31■□□□□ 0.52
Synpo-211ENSMUST00000155195 Dcaf1Q80TR8 1506 aa18.29■□□□□ 0.52
Synpo-211ENSMUST00000155195 NefmP08553 848 aa18.26■□□□□ 0.51
Synpo-211ENSMUST00000155195 Brd4Q9ESU6 1400 aaKnown RBP18.21■□□□□ 0.51
Synpo-211ENSMUST00000155195 Ap3b1Q9Z1T1 1105 aa18.16■□□□□ 0.5
Synpo-211ENSMUST00000155195 Chic1Q8CBW7 227 aa18.15■□□□□ 0.5
Synpo-211ENSMUST00000155195 Baz1aO88379 1555 aa18.14■□□□□ 0.49
Synpo-211ENSMUST00000155195 Kdm5dQ62240 1548 aa18.12■□□□□ 0.49
Synpo-211ENSMUST00000155195 Cep164Q5DU05 1446 aa17.99■□□□□ 0.47
Synpo-211ENSMUST00000155195 Npm1Q61937 292 aaKnown RBP17.96■□□□□ 0.47
Synpo-211ENSMUST00000155195 Fam50aQ9WV03 339 aaKnown RBP17.93■□□□□ 0.46
Synpo-211ENSMUST00000155195 Mier1Q5UAK0 511 aa17.91■□□□□ 0.46
Synpo-211ENSMUST00000155195 Pcgf6Q99NA9 353 aa17.88■□□□□ 0.45
Synpo-211ENSMUST00000155195 Plekhg3Q4VAC9 1341 aa17.86■□□□□ 0.45
Synpo-211ENSMUST00000155195 ScribQ80U72 1612 aa17.77■□□□□ 0.43
Synpo-211ENSMUST00000155195 Lmod2Q3UHZ5 550 aa17.76■□□□□ 0.43
Synpo-211ENSMUST00000155195 Pelp1Q9DBD5 1123 aaKnown RBP17.76■□□□□ 0.43
Synpo-211ENSMUST00000155195 Ppargc1bQ8VHJ7 1014 aa17.75■□□□□ 0.43
Synpo-211ENSMUST00000155195 Supt5hO55201 1082 aaKnown RBP17.72■□□□□ 0.43
Synpo-211ENSMUST00000155195 Golga3P55937 1487 aa17.71■□□□□ 0.43
Synpo-211ENSMUST00000155195 Ubl4bQ9CQ84 188 aa17.69■□□□□ 0.42
Synpo-211ENSMUST00000155195 Clip1Q922J3 1391 aa17.64■□□□□ 0.41
Synpo-211ENSMUST00000155195 TonslQ6NZL6 1363 aa17.63■□□□□ 0.41
Synpo-211ENSMUST00000155195 Sycp2Q9CUU3 1500 aa17.63■□□□□ 0.41
Synpo-211ENSMUST00000155195 NclP09405 707 aaKnown RBP17.61■□□□□ 0.41
Synpo-211ENSMUST00000155195 Rsf1E9PWW9 1441 aaKnown RBP17.6■□□□□ 0.41
Synpo-211ENSMUST00000155195 Neurod1Q60867 357 aa17.6■□□□□ 0.41
Synpo-211ENSMUST00000155195 Slc24a1Q91WD8 1130 aa17.58■□□□□ 0.41
Synpo-211ENSMUST00000155195 Cdk11bP24788 784 aaKnown RBP17.53■□□□□ 0.4
Synpo-211ENSMUST00000155195 Kif15Q6P9L6 1387 aa17.48■□□□□ 0.39
Synpo-211ENSMUST00000155195 Crybg2B7ZCC2 1516 aa17.47■□□□□ 0.39
Synpo-211ENSMUST00000155195 Eid3Q3V124 375 aa17.47■□□□□ 0.39
Synpo-211ENSMUST00000155195 Nop58Q6DFW4 536 aaKnown RBP17.46■□□□□ 0.38
Synpo-211ENSMUST00000155195 Cecr2E9Q2Z1 1453 aa17.43■□□□□ 0.38
Synpo-211ENSMUST00000155195 Stra8P70278 393 aa17.43■□□□□ 0.38
Synpo-211ENSMUST00000155195 Ccdc88bQ4QRL3 1481 aa17.42■□□□□ 0.38
Synpo-211ENSMUST00000155195 Smarca2Q6DIC0 1577 aa17.37■□□□□ 0.37
Synpo-211ENSMUST00000155195 Zbtb7cQ8VCZ7 619 aa17.35■□□□□ 0.37
Synpo-211ENSMUST00000155195 Ercc6F8VPZ5 1481 aa17.34■□□□□ 0.37
Synpo-211ENSMUST00000155195 Fkbp15Q6P9Q6 1216 aaKnown RBP17.31■□□□□ 0.36
Synpo-211ENSMUST00000155195 Setd5Q5XJV7 1441 aa17.31■□□□□ 0.36
Synpo-211ENSMUST00000155195 CftrP26361 1476 aa17.3■□□□□ 0.36
Synpo-211ENSMUST00000155195 Pds5bQ4VA53 1446 aaKnown RBP17.29■□□□□ 0.36
Synpo-211ENSMUST00000155195 BlmO88700 1416 aa17.27■□□□□ 0.36
Synpo-211ENSMUST00000155195 Ifnlr1Q8CGK5 535 aa17.27■□□□□ 0.35
Synpo-211ENSMUST00000155195 ClspnQ80YR7 1315 aa17.26■□□□□ 0.35
Synpo-211ENSMUST00000155195 Sall2Q9QX96 1004 aa17.26■□□□□ 0.35
Synpo-211ENSMUST00000155195 Ccdc18Q640L5 1455 aa17.21■□□□□ 0.34
Synpo-211ENSMUST00000155195 NrdcQ8BHG1 1161 aa17.2■□□□□ 0.34
Synpo-211ENSMUST00000155195 CenpbP27790 599 aa17.2■□□□□ 0.34
Synpo-211ENSMUST00000155195 Mapk8ip2Q9ERE9 830 aa17.2■□□□□ 0.34
Synpo-211ENSMUST00000155195 Os9Q8K2C7 672 aa17.2■□□□□ 0.34
Synpo-211ENSMUST00000155195 Hnrnpul2Q00PI9 745 aaKnown RBP17.19■□□□□ 0.34
Synpo-211ENSMUST00000155195 Synj1Q8CHC4 1574 aa17.18■□□□□ 0.34
Synpo-211ENSMUST00000155195 Chic2Q9D9G3 165 aa17.17■□□□□ 0.34
Synpo-211ENSMUST00000155195 Fmn1Q05860 1466 aa17.16■□□□□ 0.34
Synpo-211ENSMUST00000155195 Eea1Q8BL66 1411 aa17.13■□□□□ 0.33
Synpo-211ENSMUST00000155195 Anp32bQ9EST5 272 aaKnown RBP17.1■□□□□ 0.33
Synpo-211ENSMUST00000155195 Cep162Q6ZQ06 1403 aa17.08■□□□□ 0.33
Synpo-211ENSMUST00000155195 Eif5bQ05D44 1216 aaKnown RBP17.07■□□□□ 0.32
Synpo-211ENSMUST00000155195 Ccer2J3QPU5 274 aa17.06■□□□□ 0.32
Synpo-211ENSMUST00000155195 Atad2bE9Q166 1460 aaKnown RBP17.06■□□□□ 0.32
Synpo-211ENSMUST00000155195 Zbtb4Q5F293 982 aa17.03■□□□□ 0.32
Synpo-211ENSMUST00000155195 Tnnt3Q9QZ47 272 aa17.03■□□□□ 0.32
Synpo-211ENSMUST00000155195 Smarca4Q3TKT4 1613 aaKnown RBP17.03■□□□□ 0.32
Synpo-211ENSMUST00000155195 Erich6D3Z6S9 713 aa16.97■□□□□ 0.31
Synpo-211ENSMUST00000155195 Aebp2Q9Z248 504 aaKnown RBP16.95■□□□□ 0.3
Synpo-211ENSMUST00000155195 Arhgap27A2AB59 869 aa16.92■□□□□ 0.3
Synpo-211ENSMUST00000155195 Cttnbp2B9EJA2 1648 aa16.91■□□□□ 0.3
Synpo-211ENSMUST00000155195 Cux2P70298 1426 aa16.91■□□□□ 0.3
Synpo-211ENSMUST00000155195 Rapgef2Q8CHG7 1496 aa16.89■□□□□ 0.29
Synpo-211ENSMUST00000155195 Phldb1Q6PDH0 1371 aaKnown RBP16.86■□□□□ 0.29
Synpo-211ENSMUST00000155195 Iqgap2Q3UQ44 1575 aa16.84■□□□□ 0.29
Synpo-211ENSMUST00000155195 Baz1bQ9Z277 1479 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 293.2 ms