RNA–Protein interactions for RNA: ENSMUST00000122872.7

Pgbd1-202, Transcript of PiggyBac transposable element-derived 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pgbd1, Length 2,965 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pgbd1-202ENSMUST00000122872 Rpgrip1Q9EPQ2 1331 aa12.73□□□□□ -0.37
Pgbd1-202ENSMUST00000122872 NischQ80TM9 1593 aa12.66□□□□□ -0.38
Pgbd1-202ENSMUST00000122872 Rtl1Q7M732 1744 aa12.57□□□□□ -0.4
Pgbd1-202ENSMUST00000122872 Ccdc180J3QNE4 1664 aa12.42□□□□□ -0.42
Pgbd1-202ENSMUST00000122872 Abcc9P70170 1546 aa12.35□□□□□ -0.43
Pgbd1-202ENSMUST00000122872 Gm35339A0A140LHH9 1649 aa12.25□□□□□ -0.45
Pgbd1-202ENSMUST00000122872 Acin1Q9JIX8 1338 aaKnown RBP12.25□□□□□ -0.45
Pgbd1-202ENSMUST00000122872 Rhox8Q6VSS7 320 aa12.14□□□□□ -0.47
Pgbd1-202ENSMUST00000122872 Pcgf6Q99NA9 353 aa12.03□□□□□ -0.48
Pgbd1-202ENSMUST00000122872 Zcchc6Q5BLK4 1491 aaKnown RBP11.94□□□□□ -0.5
Pgbd1-202ENSMUST00000122872 Abcc8B2RUS7 1588 aa11.9□□□□□ -0.5
Pgbd1-202ENSMUST00000122872 Dcaf1Q80TR8 1506 aa11.9□□□□□ -0.5
Pgbd1-202ENSMUST00000122872 Ehmt2Q9Z148 1263 aaKnown RBP11.75□□□□□ -0.53
Pgbd1-202ENSMUST00000122872 HrcG5E8J6 738 aa11.74□□□□□ -0.53
Pgbd1-202ENSMUST00000122872 Trim41Q5NCC3 630 aa11.73□□□□□ -0.53
Pgbd1-202ENSMUST00000122872 Supt5hO55201 1082 aaKnown RBP11.64□□□□□ -0.55
Pgbd1-202ENSMUST00000122872 Neurod1Q60867 357 aa11.6□□□□□ -0.55
Pgbd1-202ENSMUST00000122872 Las1lA2BE28 776 aaKnown RBP11.57□□□□□ -0.56
Pgbd1-202ENSMUST00000122872 Myt1Q8CFC2 1127 aa11.38□□□□□ -0.59
Pgbd1-202ENSMUST00000122872 1700123L14RikQ3V2K7 440 aa11.34□□□□□ -0.59
Pgbd1-202ENSMUST00000122872 Anks4bQ8K3X6 423 aa11.31□□□□□ -0.6
Pgbd1-202ENSMUST00000122872 CenpbP27790 599 aa11.27□□□□□ -0.61
Pgbd1-202ENSMUST00000122872 NefmP08553 848 aa11.24□□□□□ -0.61
Pgbd1-202ENSMUST00000122872 Cep164Q5DU05 1446 aa11.24□□□□□ -0.61
Pgbd1-202ENSMUST00000122872 Zeb1Q64318 1117 aa11.22□□□□□ -0.61
Pgbd1-202ENSMUST00000122872 Cngb1E1AZ71 1325 aa11.21□□□□□ -0.61
Pgbd1-202ENSMUST00000122872 Csrnp3P59055 597 aa11.21□□□□□ -0.62
Pgbd1-202ENSMUST00000122872 Ccdc136Q3TVA9 1136 aa11.2□□□□□ -0.62
Pgbd1-202ENSMUST00000122872 Sall2Q9QX96 1004 aa11.2□□□□□ -0.62
Pgbd1-202ENSMUST00000122872 Aplp2Q06335 707 aa11.16□□□□□ -0.62
Pgbd1-202ENSMUST00000122872 Rb1cc1Q9ESK9 1588 aa11.13□□□□□ -0.63
Pgbd1-202ENSMUST00000122872 Ube2uB1AUC4 352 aa11.11□□□□□ -0.63
Pgbd1-202ENSMUST00000122872 Mier1Q5UAK0 511 aa11.06□□□□□ -0.64
Pgbd1-202ENSMUST00000122872 Baz1aO88379 1555 aa11.03□□□□□ -0.64
Pgbd1-202ENSMUST00000122872 Cdk11bP24788 784 aaKnown RBP11□□□□□ -0.65
Pgbd1-202ENSMUST00000122872 DiexfQ8BTT6 772 aaKnown RBP10.99□□□□□ -0.65
Pgbd1-202ENSMUST00000122872 Nop58Q6DFW4 536 aaKnown RBP10.95□□□□□ -0.66
Pgbd1-202ENSMUST00000122872 ClspnQ80YR7 1315 aa10.91□□□□□ -0.66
Pgbd1-202ENSMUST00000122872 Aebp2Q9Z248 504 aaKnown RBP10.89□□□□□ -0.67
Pgbd1-202ENSMUST00000122872 Bcl11aQ9QYE3 773 aa10.88□□□□□ -0.67
Pgbd1-202ENSMUST00000122872 Rsf1E9PWW9 1441 aaKnown RBP10.87□□□□□ -0.67
Pgbd1-202ENSMUST00000122872 Wdr66E9Q743 1299 aa10.87□□□□□ -0.67
Pgbd1-202ENSMUST00000122872 ScribQ80U72 1612 aa10.84□□□□□ -0.67
Pgbd1-202ENSMUST00000122872 Smarca2Q6DIC0 1577 aa10.84□□□□□ -0.67
Pgbd1-202ENSMUST00000122872 Chic1Q8CBW7 227 aa10.81□□□□□ -0.68
Pgbd1-202ENSMUST00000122872 Gm38655A0A286YDK6 273 aa10.8□□□□□ -0.68
Pgbd1-202ENSMUST00000122872 Gab3Q8BSM5 595 aa10.79□□□□□ -0.68
Pgbd1-202ENSMUST00000122872 Crybg2B7ZCC2 1516 aa10.75□□□□□ -0.69
Pgbd1-202ENSMUST00000122872 Kdm5dQ62240 1548 aa10.75□□□□□ -0.69
Pgbd1-202ENSMUST00000122872 Fam71e1A1L3C1 212 aa10.73□□□□□ -0.69
Pgbd1-202ENSMUST00000122872 Ccdc88bQ4QRL3 1481 aa10.71□□□□□ -0.69
Pgbd1-202ENSMUST00000122872 Tnnt3Q9QZ47 272 aa10.68□□□□□ -0.7
Pgbd1-202ENSMUST00000122872 TonslQ6NZL6 1363 aa10.65□□□□□ -0.7
Pgbd1-202ENSMUST00000122872 Golga3P55937 1487 aa10.64□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 Ppargc1bQ8VHJ7 1014 aa10.64□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 UbtfP25976 765 aaKnown RBP10.64□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 Hnrnpul2Q00PI9 745 aaKnown RBP10.62□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 SafbD3YXK2 937 aaKnown RBP10.59□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 NacadQ5SWP3 1504 aa10.59□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 Brd4Q9ESU6 1400 aaKnown RBP10.59□□□□□ -0.71
Pgbd1-202ENSMUST00000122872 Mapk8ip2Q9ERE9 830 aa10.58□□□□□ -0.72
Pgbd1-202ENSMUST00000122872 Rtl5Q5DTT4 599 aa10.56□□□□□ -0.72
Pgbd1-202ENSMUST00000122872 PrkcshO08795 521 aa10.54□□□□□ -0.72
Pgbd1-202ENSMUST00000122872 Anp32aO35381 247 aa10.53□□□□□ -0.72
Pgbd1-202ENSMUST00000122872 Rapgef2Q8CHG7 1496 aa10.51□□□□□ -0.73
Pgbd1-202ENSMUST00000122872 Ifnlr1Q8CGK5 535 aa10.49□□□□□ -0.73
Pgbd1-202ENSMUST00000122872 Top2bQ64511 1612 aa10.47□□□□□ -0.73
Pgbd1-202ENSMUST00000122872 Ncapd3Q6ZQK0 1506 aa10.46□□□□□ -0.73
Pgbd1-202ENSMUST00000122872 Znf710Q3U288 666 aa10.44□□□□□ -0.74
Pgbd1-202ENSMUST00000122872 Synj1Q8CHC4 1574 aa10.44□□□□□ -0.74
Pgbd1-202ENSMUST00000122872 Ap3b1Q9Z1T1 1105 aa10.41□□□□□ -0.74
Pgbd1-202ENSMUST00000122872 Pelp1Q9DBD5 1123 aaKnown RBP10.41□□□□□ -0.74
Pgbd1-202ENSMUST00000122872 Stra8P70278 393 aa10.4□□□□□ -0.74
Pgbd1-202ENSMUST00000122872 Cecr2E9Q2Z1 1453 aa10.4□□□□□ -0.74
Pgbd1-202ENSMUST00000122872 Cep162Q6ZQ06 1403 aa10.39□□□□□ -0.75
Pgbd1-202ENSMUST00000122872 Nolc1E9Q5C9 702 aaKnown RBP10.37□□□□□ -0.75
Pgbd1-202ENSMUST00000122872 Rpap1Q80TE0 1409 aa10.36□□□□□ -0.75
Pgbd1-202ENSMUST00000122872 Kdm5bQ80Y84 1544 aa10.35□□□□□ -0.75
Pgbd1-202ENSMUST00000122872 Sycp2Q9CUU3 1500 aa10.35□□□□□ -0.75
Pgbd1-202ENSMUST00000122872 Kcna4Q61423 654 aa10.34□□□□□ -0.75
Pgbd1-202ENSMUST00000122872 Amer1Q7TS75 1132 aa10.33□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Calr4Q3TQS0 420 aa10.33□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Cc2d2aQ8CFW7 1633 aa10.33□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Top2aQ01320 1528 aaKnown RBP10.33□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 CftrP26361 1476 aa10.32□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Supt16hQ920B9 1047 aa10.32□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Clip1Q922J3 1391 aa10.3□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Eif4g1Q6NZJ6 1600 aaKnown RBP10.28□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Esf1Q3V1V3 845 aaKnown RBP10.28□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Plekhg3Q4VAC9 1341 aa10.28□□□□□ -0.76
Pgbd1-202ENSMUST00000122872 Fmn1Q05860 1466 aa10.27□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 Myt1lP97500 1187 aa10.27□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 Hdac5Q9Z2V6 1113 aa10.27□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 Cttnbp2B9EJA2 1648 aa10.25□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 Washc2Q6PGL7 1334 aa10.24□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 Eid3Q3V124 375 aa10.24□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 TchhA0A0B4J1F9 1599 aa10.22□□□□□ -0.77
Pgbd1-202ENSMUST00000122872 Upf2A2AT37 1269 aaKnown RBP10.2□□□□□ -0.78
Pgbd1-202ENSMUST00000122872 UacaQ8CGB3 1411 aa10.19□□□□□ -0.78
Pgbd1-202ENSMUST00000122872 Baz1bQ9Z277 1479 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms