RNA–Protein interactions for RNA: ENSMUST00000117549.7

Ube4a-202, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ube4a, Length 3,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-202ENSMUST00000117549 Gm35339A0A140LHH9 1649 aa12.62□□□□□ -0.39
Ube4a-202ENSMUST00000117549 NischQ80TM9 1593 aa12.15□□□□□ -0.46
Ube4a-202ENSMUST00000117549 Abcc8B2RUS7 1588 aa11.84□□□□□ -0.51
Ube4a-202ENSMUST00000117549 Abcc9P70170 1546 aa11.84□□□□□ -0.51
Ube4a-202ENSMUST00000117549 Rhox8Q6VSS7 320 aa11.54□□□□□ -0.56
Ube4a-202ENSMUST00000117549 ScribQ80U72 1612 aa11.41□□□□□ -0.58
Ube4a-202ENSMUST00000117549 Ehmt2Q9Z148 1263 aaKnown RBP11.29□□□□□ -0.6
Ube4a-202ENSMUST00000117549 NacadQ5SWP3 1504 aa11.17□□□□□ -0.62
Ube4a-202ENSMUST00000117549 Dcaf1Q80TR8 1506 aa11.11□□□□□ -0.63
Ube4a-202ENSMUST00000117549 Kdm5dQ62240 1548 aa11.01□□□□□ -0.65
Ube4a-202ENSMUST00000117549 Sycp2Q9CUU3 1500 aa10.93□□□□□ -0.66
Ube4a-202ENSMUST00000117549 Ccdc180J3QNE4 1664 aa10.76□□□□□ -0.69
Ube4a-202ENSMUST00000117549 BicraF8VPZ9 1578 aa10.7□□□□□ -0.7
Ube4a-202ENSMUST00000117549 Crybg2B7ZCC2 1516 aa10.7□□□□□ -0.7
Ube4a-202ENSMUST00000117549 Ccdc136Q3TVA9 1136 aa10.66□□□□□ -0.7
Ube4a-202ENSMUST00000117549 Pds5bQ4VA53 1446 aaKnown RBP10.56□□□□□ -0.72
Ube4a-202ENSMUST00000117549 Rb1cc1Q9ESK9 1588 aa10.55□□□□□ -0.72
Ube4a-202ENSMUST00000117549 Baz1bQ9Z277 1479 aa10.52□□□□□ -0.73
Ube4a-202ENSMUST00000117549 Thoc2B1AZI6 1594 aaKnown RBP10.5□□□□□ -0.73
Ube4a-202ENSMUST00000117549 Baz1aO88379 1555 aa10.49□□□□□ -0.73
Ube4a-202ENSMUST00000117549 Atad2bE9Q166 1460 aaKnown RBP10.41□□□□□ -0.74
Ube4a-202ENSMUST00000117549 Zeb1Q64318 1117 aa10.38□□□□□ -0.75
Ube4a-202ENSMUST00000117549 Gab3Q8BSM5 595 aa10.36□□□□□ -0.75
Ube4a-202ENSMUST00000117549 Smarca2Q6DIC0 1577 aa10.33□□□□□ -0.76
Ube4a-202ENSMUST00000117549 Ppargc1bQ8VHJ7 1014 aa10.31□□□□□ -0.76
Ube4a-202ENSMUST00000117549 Fam135aQ6NS59 1506 aa10.27□□□□□ -0.76
Ube4a-202ENSMUST00000117549 Ercc6F8VPZ5 1481 aa10.26□□□□□ -0.77
Ube4a-202ENSMUST00000117549 Dnajc5bQ9CQ94 199 aa10.25□□□□□ -0.77
Ube4a-202ENSMUST00000117549 Smarca4Q3TKT4 1613 aaKnown RBP10.24□□□□□ -0.77
Ube4a-202ENSMUST00000117549 Pcgf6Q99NA9 353 aa10.23□□□□□ -0.77
Ube4a-202ENSMUST00000117549 Acin1Q9JIX8 1338 aaKnown RBP10.19□□□□□ -0.78
Ube4a-202ENSMUST00000117549 Cc2d2aQ8CFW7 1633 aa10.18□□□□□ -0.78
Ube4a-202ENSMUST00000117549 Trim41Q5NCC3 630 aa10.17□□□□□ -0.78
Ube4a-202ENSMUST00000117549 Supt5hO55201 1082 aaKnown RBP10.16□□□□□ -0.78
Ube4a-202ENSMUST00000117549 Iqgap2Q3UQ44 1575 aa10.16□□□□□ -0.78
Ube4a-202ENSMUST00000117549 Rpgrip1Q9EPQ2 1331 aa10.16□□□□□ -0.78
Ube4a-202ENSMUST00000117549 Wdr62Q3U3T8 1523 aa10.14□□□□□ -0.79
Ube4a-202ENSMUST00000117549 Cngb1E1AZ71 1325 aa10.13□□□□□ -0.79
Ube4a-202ENSMUST00000117549 Zcchc6Q5BLK4 1491 aaKnown RBP10.11□□□□□ -0.79
Ube4a-202ENSMUST00000117549 Phldb1Q6PDH0 1371 aaKnown RBP10.1□□□□□ -0.79
Ube4a-202ENSMUST00000117549 Wdr66E9Q743 1299 aa10.07□□□□□ -0.8
Ube4a-202ENSMUST00000117549 Frmpd1A2AKB4 1549 aa10.06□□□□□ -0.8
Ube4a-202ENSMUST00000117549 Gm38655A0A286YDK6 273 aa9.99□□□□□ -0.81
Ube4a-202ENSMUST00000117549 Cecr2E9Q2Z1 1453 aa9.98□□□□□ -0.81
Ube4a-202ENSMUST00000117549 Cttnbp2B9EJA2 1648 aa9.94□□□□□ -0.82
Ube4a-202ENSMUST00000117549 Mrc2Q64449 1479 aa9.93□□□□□ -0.82
Ube4a-202ENSMUST00000117549 UbtfP25976 765 aaKnown RBP9.93□□□□□ -0.82
Ube4a-202ENSMUST00000117549 Myt1lP97500 1187 aa9.92□□□□□ -0.82
Ube4a-202ENSMUST00000117549 Neurod1Q60867 357 aa9.91□□□□□ -0.82
Ube4a-202ENSMUST00000117549 Rtl1Q7M732 1744 aa9.9□□□□□ -0.83
Ube4a-202ENSMUST00000117549 Unc13aQ4KUS2 1712 aa9.88□□□□□ -0.83
Ube4a-202ENSMUST00000117549 CftrP26361 1476 aa9.87□□□□□ -0.83
Ube4a-202ENSMUST00000117549 Brd4Q9ESU6 1400 aaKnown RBP9.87□□□□□ -0.83
Ube4a-202ENSMUST00000117549 Esf1Q3V1V3 845 aaKnown RBP9.86□□□□□ -0.83
Ube4a-202ENSMUST00000117549 Ubl4bQ9CQ84 188 aa9.79□□□□□ -0.84
Ube4a-202ENSMUST00000117549 Mapk8ip2Q9ERE9 830 aa9.78□□□□□ -0.84
Ube4a-202ENSMUST00000117549 Synj1Q8CHC4 1574 aa9.76□□□□□ -0.85
Ube4a-202ENSMUST00000117549 Sall2Q9QX96 1004 aa9.75□□□□□ -0.85
Ube4a-202ENSMUST00000117549 Mier1Q5UAK0 511 aa9.74□□□□□ -0.85
Ube4a-202ENSMUST00000117549 Rsf1E9PWW9 1441 aaKnown RBP9.74□□□□□ -0.85
Ube4a-202ENSMUST00000117549 Chic1Q8CBW7 227 aa9.73□□□□□ -0.85
Ube4a-202ENSMUST00000117549 Csrnp3P59055 597 aa9.72□□□□□ -0.85
Ube4a-202ENSMUST00000117549 Lamc3Q9R0B6 1581 aa9.7□□□□□ -0.86
Ube4a-202ENSMUST00000117549 HrcG5E8J6 738 aa9.69□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Slc24a1Q91WD8 1130 aa9.67□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Lrriq1Q0P5X1 1673 aa9.66□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Las1lA2BE28 776 aaKnown RBP9.66□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Dnajc5P60904 198 aa9.66□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Shroom2A2ALU4 1481 aa9.65□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Ap3b1Q9Z1T1 1105 aa9.65□□□□□ -0.86
Ube4a-202ENSMUST00000117549 Eif4g3Q80XI3 1579 aaKnown RBP9.64□□□□□ -0.87
Ube4a-202ENSMUST00000117549 Npm2Q80W85 207 aa9.63□□□□□ -0.87
Ube4a-202ENSMUST00000117549 Cux2P70298 1426 aa9.61□□□□□ -0.87
Ube4a-202ENSMUST00000117549 Eid3Q3V124 375 aa9.6□□□□□ -0.87
Ube4a-202ENSMUST00000117549 Aebp2Q9Z248 504 aaKnown RBP9.6□□□□□ -0.87
Ube4a-202ENSMUST00000117549 TnnQ80Z71 1560 aa9.58□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Kif21aQ9QXL2 1672 aa9.57□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Il27Q8K3I6 234 aa9.56□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Cep164Q5DU05 1446 aa9.56□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Kif15Q6P9L6 1387 aa9.55□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Plekhg3Q4VAC9 1341 aa9.55□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Nop58Q6DFW4 536 aaKnown RBP9.54□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Ube2uB1AUC4 352 aa9.53□□□□□ -0.88
Ube4a-202ENSMUST00000117549 1700123L14RikQ3V2K7 440 aa9.53□□□□□ -0.88
Ube4a-202ENSMUST00000117549 Cdk11bP24788 784 aaKnown RBP9.52□□□□□ -0.89
Ube4a-202ENSMUST00000117549 Ccdc18Q640L5 1455 aa9.49□□□□□ -0.89
Ube4a-202ENSMUST00000117549 Top2bQ64511 1612 aa9.48□□□□□ -0.89
Ube4a-202ENSMUST00000117549 NefmP08553 848 aa9.48□□□□□ -0.89
Ube4a-202ENSMUST00000117549 Ift140E9PY46 1464 aa9.47□□□□□ -0.89
Ube4a-202ENSMUST00000117549 Zcchc11B2RX14 1644 aaKnown RBP9.47□□□□□ -0.89
Ube4a-202ENSMUST00000117549 Ttbk1Q6PCN3 1308 aa9.46□□□□□ -0.89
Ube4a-202ENSMUST00000117549 Pbrm1Q8BSQ9 1634 aaKnown RBP9.45□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Npm1Q61937 292 aaKnown RBP9.45□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Gpatch8A2A6A1 1505 aa9.45□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Urb2E9Q7L1 1524 aaKnown RBP9.44□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Camsap1A2AHC3 1581 aa9.43□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Crocc2F6XLV1 1638 aa9.43□□□□□ -0.9
Ube4a-202ENSMUST00000117549 LrpprcQ6PB66 1392 aaKnown RBP9.42□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Golga3P55937 1487 aa9.42□□□□□ -0.9
Ube4a-202ENSMUST00000117549 Rusc2Q80U22 1514 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms