RNA–Protein interactions for RNA: ENSMUST00000116476.8

Pabpn1-202, Transcript of Polyadenylate-binding protein 2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pabpn1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1-202ENSMUST00000116476 Gm35339A0A140LHH9 1649 aa63.44■■■■■ 7.75
Pabpn1-202ENSMUST00000116476 NischQ80TM9 1593 aa63.41■■■■■ 7.74
Pabpn1-202ENSMUST00000116476 Abcc9P70170 1546 aa61.51■■■■■ 7.44
Pabpn1-202ENSMUST00000116476 Abcc8B2RUS7 1588 aa60.84■■■■■ 7.33
Pabpn1-202ENSMUST00000116476 ScribQ80U72 1612 aa57.71■■■■■ 6.83
Pabpn1-202ENSMUST00000116476 Rhox8Q6VSS7 320 aa56.5■■■■■ 6.64
Pabpn1-202ENSMUST00000116476 Dcaf1Q80TR8 1506 aa56.44■■■■■ 6.63
Pabpn1-202ENSMUST00000116476 Kdm5dQ62240 1548 aa56.21■■■■■ 6.59
Pabpn1-202ENSMUST00000116476 NacadQ5SWP3 1504 aa56.1■■■■■ 6.57
Pabpn1-202ENSMUST00000116476 Rb1cc1Q9ESK9 1588 aa55.4■■■■■ 6.46
Pabpn1-202ENSMUST00000116476 Sycp2Q9CUU3 1500 aa54.93■■■■■ 6.38
Pabpn1-202ENSMUST00000116476 Ccdc180J3QNE4 1664 aa54.8■■■■■ 6.36
Pabpn1-202ENSMUST00000116476 Baz1aO88379 1555 aa54.73■■■■■ 6.35
Pabpn1-202ENSMUST00000116476 Crybg2B7ZCC2 1516 aa54.23■■■■■ 6.27
Pabpn1-202ENSMUST00000116476 Rtl1Q7M732 1744 aa54.16■■■■■ 6.26
Pabpn1-202ENSMUST00000116476 BicraF8VPZ9 1578 aa53.91■■■■■ 6.22
Pabpn1-202ENSMUST00000116476 Zcchc6Q5BLK4 1491 aaKnown RBP53.72■■■■■ 6.19
Pabpn1-202ENSMUST00000116476 Smarca2Q6DIC0 1577 aa53.3■■■■■ 6.12
Pabpn1-202ENSMUST00000116476 Ccdc136Q3TVA9 1136 aa52.62■■■■■ 6.01
Pabpn1-202ENSMUST00000116476 Cecr2E9Q2Z1 1453 aa52.53■■■■■ 6
Pabpn1-202ENSMUST00000116476 Smarca4Q3TKT4 1613 aaKnown RBP52.1■■■■■ 5.93
Pabpn1-202ENSMUST00000116476 Pds5bQ4VA53 1446 aaKnown RBP52.05■■■■■ 5.92
Pabpn1-202ENSMUST00000116476 Brd4Q9ESU6 1400 aaKnown RBP51.91■■■■■ 5.9
Pabpn1-202ENSMUST00000116476 Atad2bE9Q166 1460 aaKnown RBP51.9■■■■■ 5.9
Pabpn1-202ENSMUST00000116476 Trim41Q5NCC3 630 aa51.83■■■■■ 5.89
Pabpn1-202ENSMUST00000116476 Synj1Q8CHC4 1574 aa51.67■■■■■ 5.86
Pabpn1-202ENSMUST00000116476 CftrP26361 1476 aa51.61■■■■■ 5.85
Pabpn1-202ENSMUST00000116476 Iqgap2Q3UQ44 1575 aa51.61■■■■■ 5.85
Pabpn1-202ENSMUST00000116476 Cttnbp2B9EJA2 1648 aa51.45■■■■■ 5.83
Pabpn1-202ENSMUST00000116476 Ercc6F8VPZ5 1481 aa51.01■■■■■ 5.76
Pabpn1-202ENSMUST00000116476 Thoc2B1AZI6 1594 aaKnown RBP50.99■■■■■ 5.75
Pabpn1-202ENSMUST00000116476 Wdr62Q3U3T8 1523 aa50.9■■■■■ 5.74
Pabpn1-202ENSMUST00000116476 Esf1Q3V1V3 845 aaKnown RBP50.87■■■■■ 5.73
Pabpn1-202ENSMUST00000116476 Frmpd1A2AKB4 1549 aa50.86■■■■■ 5.73
Pabpn1-202ENSMUST00000116476 Golga3P55937 1487 aa50.69■■■■■ 5.71
Pabpn1-202ENSMUST00000116476 Cngb1E1AZ71 1325 aa50.54■■■■■ 5.68
Pabpn1-202ENSMUST00000116476 Top2bQ64511 1612 aa50.38■■■■■ 5.66
Pabpn1-202ENSMUST00000116476 HrcG5E8J6 738 aa50.35■■■■■ 5.65
Pabpn1-202ENSMUST00000116476 Cc2d2aQ8CFW7 1633 aa50.3■■■■■ 5.64
Pabpn1-202ENSMUST00000116476 Phldb1Q6PDH0 1371 aaKnown RBP50.2■■■■■ 5.63
Pabpn1-202ENSMUST00000116476 Unc13aQ4KUS2 1712 aa50.18■■■■■ 5.62
Pabpn1-202ENSMUST00000116476 Dnajc5bQ9CQ94 199 aa50.17■■■■■ 5.62
Pabpn1-202ENSMUST00000116476 Fam135aQ6NS59 1506 aa50.16■■■■■ 5.62
Pabpn1-202ENSMUST00000116476 Rsf1E9PWW9 1441 aaKnown RBP49.87■■■■■ 5.57
Pabpn1-202ENSMUST00000116476 Ccdc88bQ4QRL3 1481 aa49.79■■■■■ 5.56
Pabpn1-202ENSMUST00000116476 Fmn1Q05860 1466 aa49.77■■■■■ 5.56
Pabpn1-202ENSMUST00000116476 Ubl4bQ9CQ84 188 aa49.72■■■■■ 5.55
Pabpn1-202ENSMUST00000116476 Lamc3Q9R0B6 1581 aa49.69■■■■■ 5.54
Pabpn1-202ENSMUST00000116476 Chic1Q8CBW7 227 aa49.68■■■■■ 5.54
Pabpn1-202ENSMUST00000116476 Kif15Q6P9L6 1387 aa49.62■■■■■ 5.53
Pabpn1-202ENSMUST00000116476 TnnQ80Z71 1560 aa49.61■■■■■ 5.53
Pabpn1-202ENSMUST00000116476 Cep164Q5DU05 1446 aa49.56■■■■■ 5.53
Pabpn1-202ENSMUST00000116476 Baz1bQ9Z277 1479 aa49.51■■■■■ 5.52
Pabpn1-202ENSMUST00000116476 Cux2P70298 1426 aa49.22■■■■■ 5.47
Pabpn1-202ENSMUST00000116476 Top2aQ01320 1528 aaKnown RBP49.14■■■■■ 5.46
Pabpn1-202ENSMUST00000116476 Mrc2Q64449 1479 aa49.03■■■■■ 5.44
Pabpn1-202ENSMUST00000116476 Camsap1A2AHC3 1581 aa49■■■■■ 5.43
Pabpn1-202ENSMUST00000116476 Ccdc18Q640L5 1455 aa48.97■■■■■ 5.43
Pabpn1-202ENSMUST00000116476 Il27Q8K3I6 234 aa48.9■■■■■ 5.42
Pabpn1-202ENSMUST00000116476 Npm1Q61937 292 aaKnown RBP48.83■■■■■ 5.41
Pabpn1-202ENSMUST00000116476 Gab3Q8BSM5 595 aa48.78■■■■■ 5.4
Pabpn1-202ENSMUST00000116476 Grin2bQ01097 1482 aa48.51■■■■■ 5.36
Pabpn1-202ENSMUST00000116476 LrpprcQ6PB66 1392 aaKnown RBP48.5■■■■■ 5.35
Pabpn1-202ENSMUST00000116476 Kif21aQ9QXL2 1672 aa48.42■■■■■ 5.34
Pabpn1-202ENSMUST00000116476 NrkQ9R0G8 1455 aa48.38■■■■■ 5.33
Pabpn1-202ENSMUST00000116476 Rapgef2Q8CHG7 1496 aa48.36■■■■■ 5.33
Pabpn1-202ENSMUST00000116476 PogzQ8BZH4 1409 aaKnown RBP48.32■■■■■ 5.33
Pabpn1-202ENSMUST00000116476 Dhx29Q6PGC1 1365 aaKnown RBP48.3■■■■■ 5.32
Pabpn1-202ENSMUST00000116476 PtprkP35822 1457 aa48.26■■■■■ 5.32
Pabpn1-202ENSMUST00000116476 Shroom4Q1W617 1475 aa48.24■■■■■ 5.31
Pabpn1-202ENSMUST00000116476 Duox2A2AQ99 1517 aa48.15■■■■■ 5.3
Pabpn1-202ENSMUST00000116476 Npm2Q80W85 207 aa48.14■■■■■ 5.3
Pabpn1-202ENSMUST00000116476 Efcab5A0JP43 1406 aa48.1■■■■■ 5.29
Pabpn1-202ENSMUST00000116476 Crocc2F6XLV1 1638 aa48.04■■■■■ 5.28
Pabpn1-202ENSMUST00000116476 Cep162Q6ZQ06 1403 aa48.01■■■■■ 5.28
Pabpn1-202ENSMUST00000116476 Eif4g1Q6NZJ6 1600 aaKnown RBP47.87■■■■■ 5.25
Pabpn1-202ENSMUST00000116476 Lrriq1Q0P5X1 1673 aa47.84■■■■■ 5.25
Pabpn1-202ENSMUST00000116476 Plb1Q3TTY0 1478 aa47.82■■■■■ 5.25
Pabpn1-202ENSMUST00000116476 Samd9lQ69Z37 1561 aa47.78■■■■■ 5.24
Pabpn1-202ENSMUST00000116476 Urb2E9Q7L1 1524 aaKnown RBP47.78■■■■■ 5.24
Pabpn1-202ENSMUST00000116476 Arhgap35Q91YM2 1499 aa47.78■■■■■ 5.24
Pabpn1-202ENSMUST00000116476 Mroh2bQ7M6Y6 1581 aa47.67■■■■■ 5.22
Pabpn1-202ENSMUST00000116476 Zeb1Q64318 1117 aa47.65■■■■■ 5.22
Pabpn1-202ENSMUST00000116476 Map3k1P53349 1493 aa47.62■■■■■ 5.21
Pabpn1-202ENSMUST00000116476 Myt1lP97500 1187 aa47.61■■■■■ 5.21
Pabpn1-202ENSMUST00000116476 Rad54l2Q99NG0 1466 aa47.49■■■■■ 5.19
Pabpn1-202ENSMUST00000116476 SynmQ70IV5 1561 aa47.48■■■■■ 5.19
Pabpn1-202ENSMUST00000116476 Ift140E9PY46 1464 aa47.45■■■■■ 5.19
Pabpn1-202ENSMUST00000116476 Disp1Q3TDN0 1521 aa47.41■■■■■ 5.18
Pabpn1-202ENSMUST00000116476 AqrQ8CFQ3 1481 aaKnown RBP47.36■■■■■ 5.17
Pabpn1-202ENSMUST00000116476 Clip1Q922J3 1391 aa47.32■■■■■ 5.17
Pabpn1-202ENSMUST00000116476 Magi3Q9EQJ9 1476 aa47.26■■■■■ 5.16
Pabpn1-202ENSMUST00000116476 Carmil1Q6EDY6 1374 aa47.26■■■■■ 5.16
Pabpn1-202ENSMUST00000116476 Grin2aP35436 1464 aa47.2■■■■■ 5.15
Pabpn1-202ENSMUST00000116476 Pla2r1Q62028 1487 aa47.17■■■■■ 5.14
Pabpn1-202ENSMUST00000116476 Pbrm1Q8BSQ9 1634 aaKnown RBP47.15■■■■■ 5.14
Pabpn1-202ENSMUST00000116476 Eif4g3Q80XI3 1579 aaKnown RBP47.15■■■■■ 5.14
Pabpn1-202ENSMUST00000116476 Nup160Q9Z0W3 1402 aaKnown RBP47.14■■■■■ 5.14
Pabpn1-202ENSMUST00000116476 Ehmt2Q9Z148 1263 aaKnown RBP47.07■■■■■ 5.13
Pabpn1-202ENSMUST00000116476 Setd1bQ8CFT2 1985 aa47.03■■■■■ 5.12
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms