RNA–Protein interactions for RNA: ENSMUST00000112392.7

Chd4-203, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd4, Length 6,652 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-203ENSMUST00000112392 Rhox8Q6VSS7 320 aa25.01■■□□□ 1.59
Chd4-203ENSMUST00000112392 Ehmt2Q9Z148 1263 aaKnown RBP23.3■■□□□ 1.32
Chd4-203ENSMUST00000112392 Wdr66E9Q743 1299 aa22.48■■□□□ 1.19
Chd4-203ENSMUST00000112392 Ube2uB1AUC4 352 aa22.46■■□□□ 1.19
Chd4-203ENSMUST00000112392 Cngb1E1AZ71 1325 aa22.19■■□□□ 1.14
Chd4-203ENSMUST00000112392 Zeb1Q64318 1117 aa22.16■■□□□ 1.14
Chd4-203ENSMUST00000112392 Ccdc136Q3TVA9 1136 aa22.1■■□□□ 1.13
Chd4-203ENSMUST00000112392 Esf1Q3V1V3 845 aaKnown RBP22.09■■□□□ 1.13
Chd4-203ENSMUST00000112392 Gab3Q8BSM5 595 aa22.02■■□□□ 1.12
Chd4-203ENSMUST00000112392 Las1lA2BE28 776 aaKnown RBP21.99■■□□□ 1.11
Chd4-203ENSMUST00000112392 Rpgrip1Q9EPQ2 1331 aa21.87■■□□□ 1.09
Chd4-203ENSMUST00000112392 Amer1Q7TS75 1132 aa21.82■■□□□ 1.08
Chd4-203ENSMUST00000112392 Pelp1Q9DBD5 1123 aaKnown RBP21.8■■□□□ 1.08
Chd4-203ENSMUST00000112392 Npm2Q80W85 207 aa21.73■■□□□ 1.07
Chd4-203ENSMUST00000112392 Myt1lP97500 1187 aa21.73■■□□□ 1.07
Chd4-203ENSMUST00000112392 Slc24a1Q91WD8 1130 aa21.57■■□□□ 1.04
Chd4-203ENSMUST00000112392 Ttbk1Q6PCN3 1308 aa21.27■■□□□ 1
Chd4-203ENSMUST00000112392 UbtfP25976 765 aaKnown RBP21.16■□□□□ 0.98
Chd4-203ENSMUST00000112392 Trim41Q5NCC3 630 aa21.04■□□□□ 0.96
Chd4-203ENSMUST00000112392 CenpbP27790 599 aa20.88■□□□□ 0.93
Chd4-203ENSMUST00000112392 Neurod1Q60867 357 aa20.86■□□□□ 0.93
Chd4-203ENSMUST00000112392 Ppargc1bQ8VHJ7 1014 aa20.85■□□□□ 0.93
Chd4-203ENSMUST00000112392 Il27Q8K3I6 234 aa20.83■□□□□ 0.92
Chd4-203ENSMUST00000112392 Ap3b1Q9Z1T1 1105 aa20.76■□□□□ 0.91
Chd4-203ENSMUST00000112392 Eif5bQ05D44 1216 aaKnown RBP20.73■□□□□ 0.91
Chd4-203ENSMUST00000112392 4933416C03RikQ3V063 378 aa20.69■□□□□ 0.9
Chd4-203ENSMUST00000112392 Os9Q8K2C7 672 aa20.64■□□□□ 0.89
Chd4-203ENSMUST00000112392 4930567H17RikQ3V0K5 233 aa20.6■□□□□ 0.89
Chd4-203ENSMUST00000112392 Fam50aQ9WV03 339 aaKnown RBP20.51■□□□□ 0.87
Chd4-203ENSMUST00000112392 Stra8P70278 393 aa20.48■□□□□ 0.87
Chd4-203ENSMUST00000112392 Zbtb7cQ8VCZ7 619 aa20.46■□□□□ 0.87
Chd4-203ENSMUST00000112392 Chic1Q8CBW7 227 aa20.45■□□□□ 0.86
Chd4-203ENSMUST00000112392 NrdcQ8BHG1 1161 aa20.36■□□□□ 0.85
Chd4-203ENSMUST00000112392 Acin1Q9JIX8 1338 aaKnown RBP20.34■□□□□ 0.85
Chd4-203ENSMUST00000112392 HrcG5E8J6 738 aa20.33■□□□□ 0.84
Chd4-203ENSMUST00000112392 NclP09405 707 aaKnown RBP20.32■□□□□ 0.84
Chd4-203ENSMUST00000112392 NefmP08553 848 aa20.3■□□□□ 0.84
Chd4-203ENSMUST00000112392 NeflP08551 543 aa20.27■□□□□ 0.84
Chd4-203ENSMUST00000112392 Cdk11bP24788 784 aaKnown RBP20.27■□□□□ 0.84
Chd4-203ENSMUST00000112392 Zbtb4Q5F293 982 aa20.23■□□□□ 0.83
Chd4-203ENSMUST00000112392 Ifnlr1Q8CGK5 535 aa20.22■□□□□ 0.83
Chd4-203ENSMUST00000112392 Prdm10Q3UTQ7 1184 aa20.15■□□□□ 0.82
Chd4-203ENSMUST00000112392 Anp32bQ9EST5 272 aaKnown RBP20.13■□□□□ 0.81
Chd4-203ENSMUST00000112392 Plppr3Q7TPB0 716 aa20.09■□□□□ 0.81
Chd4-203ENSMUST00000112392 Nop58Q6DFW4 536 aaKnown RBP20.03■□□□□ 0.8
Chd4-203ENSMUST00000112392 Gm13697A2AK42 830 aa20.02■□□□□ 0.8
Chd4-203ENSMUST00000112392 ArxO35085 564 aa20■□□□□ 0.79
Chd4-203ENSMUST00000112392 Hnrnpul2Q00PI9 745 aaKnown RBP19.99■□□□□ 0.79
Chd4-203ENSMUST00000112392 Atp1b4Q99ME6 356 aa19.92■□□□□ 0.78
Chd4-203ENSMUST00000112392 Pcgf6Q99NA9 353 aa19.92■□□□□ 0.78
Chd4-203ENSMUST00000112392 Myt1Q8CFC2 1127 aa19.9■□□□□ 0.78
Chd4-203ENSMUST00000112392 Mapk8ip2Q9ERE9 830 aa19.89■□□□□ 0.77
Chd4-203ENSMUST00000112392 Polr3glQ8R0C0 218 aa19.89■□□□□ 0.77
Chd4-203ENSMUST00000112392 Erich6D3Z6S9 713 aa19.86■□□□□ 0.77
Chd4-203ENSMUST00000112392 Rangap1P46061 589 aaKnown RBP19.86■□□□□ 0.77
Chd4-203ENSMUST00000112392 Lmod2Q3UHZ5 550 aa19.85■□□□□ 0.77
Chd4-203ENSMUST00000112392 Supt5hO55201 1082 aaKnown RBP19.8■□□□□ 0.76
Chd4-203ENSMUST00000112392 Gm38655A0A286YDK6 273 aa19.76■□□□□ 0.75
Chd4-203ENSMUST00000112392 Tnnt3Q9QZ47 272 aa19.74■□□□□ 0.75
Chd4-203ENSMUST00000112392 TonslQ6NZL6 1363 aa19.74■□□□□ 0.75
Chd4-203ENSMUST00000112392 NischQ80TM9 1593 aa19.73■□□□□ 0.75
Chd4-203ENSMUST00000112392 Gm35339A0A140LHH9 1649 aa19.72■□□□□ 0.75
Chd4-203ENSMUST00000112392 DaxxO35613 739 aa19.69■□□□□ 0.74
Chd4-203ENSMUST00000112392 Csrnp3P59055 597 aa19.66■□□□□ 0.74
Chd4-203ENSMUST00000112392 Nlrp6Q91WS2 869 aa19.64■□□□□ 0.73
Chd4-203ENSMUST00000112392 Gm13695A2AK44 830 aa19.63■□□□□ 0.73
Chd4-203ENSMUST00000112392 Ythdc1E9Q5K9 736 aaKnown RBP19.61■□□□□ 0.73
Chd4-203ENSMUST00000112392 Fkbp15Q6P9Q6 1216 aaKnown RBP19.61■□□□□ 0.73
Chd4-203ENSMUST00000112392 Plekhg3Q4VAC9 1341 aa19.59■□□□□ 0.73
Chd4-203ENSMUST00000112392 Zcchc6Q5BLK4 1491 aaKnown RBP19.54■□□□□ 0.72
Chd4-203ENSMUST00000112392 Mier1Q5UAK0 511 aa19.53■□□□□ 0.72
Chd4-203ENSMUST00000112392 DiexfQ8BTT6 772 aaKnown RBP19.45■□□□□ 0.7
Chd4-203ENSMUST00000112392 Abcc9P70170 1546 aa19.43■□□□□ 0.7
Chd4-203ENSMUST00000112392 CatipB9EKE5 520 aa19.39■□□□□ 0.69
Chd4-203ENSMUST00000112392 Vsig10D3YX43 558 aa19.36■□□□□ 0.69
Chd4-203ENSMUST00000112392 Ccdc180J3QNE4 1664 aa19.36■□□□□ 0.69
Chd4-203ENSMUST00000112392 Lmod3E9QA62 571 aa19.36■□□□□ 0.69
Chd4-203ENSMUST00000112392 Eid3Q3V124 375 aa19.36■□□□□ 0.69
Chd4-203ENSMUST00000112392 Npm1Q61937 292 aaKnown RBP19.31■□□□□ 0.68
Chd4-203ENSMUST00000112392 Rad21Q61550 635 aaKnown RBP19.25■□□□□ 0.67
Chd4-203ENSMUST00000112392 Irx6Q9ER75 438 aa19.24■□□□□ 0.67
Chd4-203ENSMUST00000112392 Anp32aO35381 247 aa19.17■□□□□ 0.66
Chd4-203ENSMUST00000112392 Trim26Q99PN3 545 aa19.16■□□□□ 0.66
Chd4-203ENSMUST00000112392 Rtl5Q5DTT4 599 aa19.11■□□□□ 0.65
Chd4-203ENSMUST00000112392 P3h3Q8CG70 732 aa19.08■□□□□ 0.65
Chd4-203ENSMUST00000112392 DekQ7TNV0 380 aaKnown RBP19.08■□□□□ 0.64
Chd4-203ENSMUST00000112392 Arid4bA2CG63 1314 aaKnown RBP19.06■□□□□ 0.64
Chd4-203ENSMUST00000112392 Upf2A2AT37 1269 aaKnown RBP19.04■□□□□ 0.64
Chd4-203ENSMUST00000112392 Hsp90aa1P07901 733 aaKnown RBP19.04■□□□□ 0.64
Chd4-203ENSMUST00000112392 Ppp4r2Q0VGB7 417 aa19.02■□□□□ 0.63
Chd4-203ENSMUST00000112392 ClspnQ80YR7 1315 aa19.01■□□□□ 0.63
Chd4-203ENSMUST00000112392 Safb2Q80YR5 991 aaKnown RBP19.01■□□□□ 0.63
Chd4-203ENSMUST00000112392 Chic2Q9D9G3 165 aa18.98■□□□□ 0.63
Chd4-203ENSMUST00000112392 Clstn1Q9EPL2 979 aa18.93■□□□□ 0.62
Chd4-203ENSMUST00000112392 Rtn4Q99P72 1162 aaKnown RBP18.92■□□□□ 0.62
Chd4-203ENSMUST00000112392 Fgd1P52734 960 aa18.89■□□□□ 0.61
Chd4-203ENSMUST00000112392 Rtl1Q7M732 1744 aa18.86■□□□□ 0.61
Chd4-203ENSMUST00000112392 Sall2Q9QX96 1004 aa18.78■□□□□ 0.6
Chd4-203ENSMUST00000112392 Calr4Q3TQS0 420 aa18.77■□□□□ 0.59
Chd4-203ENSMUST00000112392 Znf326O88291 580 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms