RNA–Protein interactions for RNA: ENSMUST00000107803.6

Smc4-202, Transcript of Structural maintenance of chromosomes protein 4, mousemouse

TSL 5 BASIC

Gene Smc4, Length 3,983 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4-202ENSMUST00000107803 Rhox8Q6VSS7 320 aa19.21■□□□□ 0.67
Smc4-202ENSMUST00000107803 Rpgrip1Q9EPQ2 1331 aa19■□□□□ 0.63
Smc4-202ENSMUST00000107803 Ehmt2Q9Z148 1263 aaKnown RBP18.35■□□□□ 0.53
Smc4-202ENSMUST00000107803 Acin1Q9JIX8 1338 aaKnown RBP18.04■□□□□ 0.48
Smc4-202ENSMUST00000107803 Las1lA2BE28 776 aaKnown RBP17.85■□□□□ 0.45
Smc4-202ENSMUST00000107803 Pcgf6Q99NA9 353 aa17.81■□□□□ 0.44
Smc4-202ENSMUST00000107803 NischQ80TM9 1593 aa17.79■□□□□ 0.44
Smc4-202ENSMUST00000107803 Zeb1Q64318 1117 aa17.52■□□□□ 0.39
Smc4-202ENSMUST00000107803 Ccdc180J3QNE4 1664 aa17.47■□□□□ 0.39
Smc4-202ENSMUST00000107803 Ccdc136Q3TVA9 1136 aa17.41■□□□□ 0.38
Smc4-202ENSMUST00000107803 Supt5hO55201 1082 aaKnown RBP17.32■□□□□ 0.36
Smc4-202ENSMUST00000107803 Cngb1E1AZ71 1325 aa17.27■□□□□ 0.35
Smc4-202ENSMUST00000107803 Rtl1Q7M732 1744 aa17.25■□□□□ 0.35
Smc4-202ENSMUST00000107803 Wdr66E9Q743 1299 aa17.23■□□□□ 0.35
Smc4-202ENSMUST00000107803 Trim41Q5NCC3 630 aa17.22■□□□□ 0.35
Smc4-202ENSMUST00000107803 HrcG5E8J6 738 aa17.2■□□□□ 0.34
Smc4-202ENSMUST00000107803 CenpbP27790 599 aa17.11■□□□□ 0.33
Smc4-202ENSMUST00000107803 Neurod1Q60867 357 aa17.08■□□□□ 0.32
Smc4-202ENSMUST00000107803 NefmP08553 848 aa17.04■□□□□ 0.32
Smc4-202ENSMUST00000107803 Gab3Q8BSM5 595 aa17■□□□□ 0.31
Smc4-202ENSMUST00000107803 Myt1Q8CFC2 1127 aa16.99■□□□□ 0.31
Smc4-202ENSMUST00000107803 Abcc9P70170 1546 aa16.89■□□□□ 0.29
Smc4-202ENSMUST00000107803 Cdk11bP24788 784 aaKnown RBP16.83■□□□□ 0.28
Smc4-202ENSMUST00000107803 Dcaf1Q80TR8 1506 aa16.76■□□□□ 0.27
Smc4-202ENSMUST00000107803 Nop58Q6DFW4 536 aaKnown RBP16.71■□□□□ 0.27
Smc4-202ENSMUST00000107803 Csrnp3P59055 597 aa16.69■□□□□ 0.26
Smc4-202ENSMUST00000107803 Anks4bQ8K3X6 423 aa16.64■□□□□ 0.25
Smc4-202ENSMUST00000107803 Sall2Q9QX96 1004 aa16.63■□□□□ 0.25
Smc4-202ENSMUST00000107803 UbtfP25976 765 aaKnown RBP16.61■□□□□ 0.25
Smc4-202ENSMUST00000107803 1700123L14RikQ3V2K7 440 aa16.61■□□□□ 0.25
Smc4-202ENSMUST00000107803 DiexfQ8BTT6 772 aaKnown RBP16.61■□□□□ 0.25
Smc4-202ENSMUST00000107803 Ppargc1bQ8VHJ7 1014 aa16.61■□□□□ 0.25
Smc4-202ENSMUST00000107803 Pelp1Q9DBD5 1123 aaKnown RBP16.61■□□□□ 0.25
Smc4-202ENSMUST00000107803 Mier1Q5UAK0 511 aa16.57■□□□□ 0.24
Smc4-202ENSMUST00000107803 Gm38655A0A286YDK6 273 aa16.46■□□□□ 0.23
Smc4-202ENSMUST00000107803 Aplp2Q06335 707 aa16.46■□□□□ 0.23
Smc4-202ENSMUST00000107803 Esf1Q3V1V3 845 aaKnown RBP16.42■□□□□ 0.22
Smc4-202ENSMUST00000107803 Abcc8B2RUS7 1588 aa16.38■□□□□ 0.21
Smc4-202ENSMUST00000107803 Myt1lP97500 1187 aa16.37■□□□□ 0.21
Smc4-202ENSMUST00000107803 Tnnt3Q9QZ47 272 aa16.33■□□□□ 0.2
Smc4-202ENSMUST00000107803 ClspnQ80YR7 1315 aa16.32■□□□□ 0.2
Smc4-202ENSMUST00000107803 Stra8P70278 393 aa16.24■□□□□ 0.19
Smc4-202ENSMUST00000107803 TonslQ6NZL6 1363 aa16.21■□□□□ 0.19
Smc4-202ENSMUST00000107803 Npm2Q80W85 207 aa16.19■□□□□ 0.18
Smc4-202ENSMUST00000107803 Zcchc6Q5BLK4 1491 aaKnown RBP16.18■□□□□ 0.18
Smc4-202ENSMUST00000107803 Ttbk1Q6PCN3 1308 aa16.15■□□□□ 0.18
Smc4-202ENSMUST00000107803 Cep164Q5DU05 1446 aa16.14■□□□□ 0.17
Smc4-202ENSMUST00000107803 Amer1Q7TS75 1132 aa16.14■□□□□ 0.17
Smc4-202ENSMUST00000107803 Slc24a1Q91WD8 1130 aa16.12■□□□□ 0.17
Smc4-202ENSMUST00000107803 Aebp2Q9Z248 504 aaKnown RBP16.1■□□□□ 0.17
Smc4-202ENSMUST00000107803 Rtl5Q5DTT4 599 aa16.03■□□□□ 0.16
Smc4-202ENSMUST00000107803 Anp32aO35381 247 aa16.03■□□□□ 0.16
Smc4-202ENSMUST00000107803 Bcl11aQ9QYE3 773 aa16.02■□□□□ 0.16
Smc4-202ENSMUST00000107803 Fam71e1A1L3C1 212 aa16.01■□□□□ 0.15
Smc4-202ENSMUST00000107803 Mapk8ip2Q9ERE9 830 aa16.01■□□□□ 0.15
Smc4-202ENSMUST00000107803 Chic1Q8CBW7 227 aa16■□□□□ 0.15
Smc4-202ENSMUST00000107803 Ube2uB1AUC4 352 aa16■□□□□ 0.15
Smc4-202ENSMUST00000107803 Gm35339A0A140LHH9 1649 aa15.94■□□□□ 0.14
Smc4-202ENSMUST00000107803 NclP09405 707 aaKnown RBP15.9■□□□□ 0.14
Smc4-202ENSMUST00000107803 Ap3b1Q9Z1T1 1105 aa15.88■□□□□ 0.13
Smc4-202ENSMUST00000107803 Eif5bQ05D44 1216 aaKnown RBP15.85■□□□□ 0.13
Smc4-202ENSMUST00000107803 SafbD3YXK2 937 aaKnown RBP15.8■□□□□ 0.12
Smc4-202ENSMUST00000107803 Eid3Q3V124 375 aa15.79■□□□□ 0.12
Smc4-202ENSMUST00000107803 Plekhg3Q4VAC9 1341 aa15.77■□□□□ 0.12
Smc4-202ENSMUST00000107803 4933416C03RikQ3V063 378 aa15.76■□□□□ 0.11
Smc4-202ENSMUST00000107803 Hnrnpul2Q00PI9 745 aaKnown RBP15.75■□□□□ 0.11
Smc4-202ENSMUST00000107803 Fam50aQ9WV03 339 aaKnown RBP15.71■□□□□ 0.11
Smc4-202ENSMUST00000107803 Calr4Q3TQS0 420 aa15.7■□□□□ 0.1
Smc4-202ENSMUST00000107803 NrdcQ8BHG1 1161 aa15.67■□□□□ 0.1
Smc4-202ENSMUST00000107803 Rb1cc1Q9ESK9 1588 aa15.63■□□□□ 0.09
Smc4-202ENSMUST00000107803 Ppp4r2Q0VGB7 417 aa15.61■□□□□ 0.09
Smc4-202ENSMUST00000107803 Rsf1E9PWW9 1441 aaKnown RBP15.56■□□□□ 0.08
Smc4-202ENSMUST00000107803 Wdr43Q6ZQL4 677 aaKnown RBP15.52■□□□□ 0.07
Smc4-202ENSMUST00000107803 Clip1Q922J3 1391 aa15.5■□□□□ 0.07
Smc4-202ENSMUST00000107803 DaxxO35613 739 aa15.5■□□□□ 0.07
Smc4-202ENSMUST00000107803 PrkcshO08795 521 aa15.47■□□□□ 0.07
Smc4-202ENSMUST00000107803 Il27Q8K3I6 234 aa15.45■□□□□ 0.06
Smc4-202ENSMUST00000107803 Brd4Q9ESU6 1400 aaKnown RBP15.44■□□□□ 0.06
Smc4-202ENSMUST00000107803 NeflP08551 543 aa15.42■□□□□ 0.06
Smc4-202ENSMUST00000107803 Baz1aO88379 1555 aa15.36■□□□□ 0.05
Smc4-202ENSMUST00000107803 Ifnlr1Q8CGK5 535 aa15.36■□□□□ 0.05
Smc4-202ENSMUST00000107803 Ccdc9Q8VC31 543 aaKnown RBP15.35■□□□□ 0.05
Smc4-202ENSMUST00000107803 Supt16hQ920B9 1047 aa15.33■□□□□ 0.04
Smc4-202ENSMUST00000107803 Ccdc27Q3V036 639 aa15.33■□□□□ 0.04
Smc4-202ENSMUST00000107803 Hsp90aa1P07901 733 aaKnown RBP15.32■□□□□ 0.04
Smc4-202ENSMUST00000107803 Lmod2Q3UHZ5 550 aa15.32■□□□□ 0.04
Smc4-202ENSMUST00000107803 Ccdc88bQ4QRL3 1481 aa15.3■□□□□ 0.04
Smc4-202ENSMUST00000107803 Nolc1E9Q5C9 702 aaKnown RBP15.3■□□□□ 0.04
Smc4-202ENSMUST00000107803 Golga3P55937 1487 aa15.29■□□□□ 0.04
Smc4-202ENSMUST00000107803 Mrs2Q5NCE8 434 aa15.28■□□□□ 0.04
Smc4-202ENSMUST00000107803 P3h3Q8CG70 732 aa15.26■□□□□ 0.03
Smc4-202ENSMUST00000107803 Anp32bQ9EST5 272 aaKnown RBP15.25■□□□□ 0.03
Smc4-202ENSMUST00000107803 Irx3P81067 507 aa15.2■□□□□ 0.02
Smc4-202ENSMUST00000107803 Upf2A2AT37 1269 aaKnown RBP15.18■□□□□ 0.02
Smc4-202ENSMUST00000107803 Ccer2J3QPU5 274 aa15.16■□□□□ 0.02
Smc4-202ENSMUST00000107803 Hdac5Q9Z2V6 1113 aa15.13■□□□□ 0.01
Smc4-202ENSMUST00000107803 Slc4a3P16283 1227 aa15.12■□□□□ 0.01
Smc4-202ENSMUST00000107803 Znf710Q3U288 666 aa15.08■□□□□ 0
Smc4-202ENSMUST00000107803 BlmO88700 1416 aa15.06■□□□□ 0
Smc4-202ENSMUST00000107803 Gtf3c3Q3TMP1 882 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 143.9 ms