RNA–Protein interactions for RNA: ENSMUST00000107651.8

Slc44a1-205, Transcript of Choline transporter-like protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Slc44a1, Length 4,382 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1-205ENSMUST00000107651 Gm35339A0A140LHH9 1649 aa10.89□□□□□ -0.67
Slc44a1-205ENSMUST00000107651 NischQ80TM9 1593 aa10.88□□□□□ -0.67
Slc44a1-205ENSMUST00000107651 Abcc9P70170 1546 aa10.49□□□□□ -0.73
Slc44a1-205ENSMUST00000107651 Abcc8B2RUS7 1588 aa10.48□□□□□ -0.73
Slc44a1-205ENSMUST00000107651 Rhox8Q6VSS7 320 aa10.19□□□□□ -0.78
Slc44a1-205ENSMUST00000107651 ScribQ80U72 1612 aa10.05□□□□□ -0.8
Slc44a1-205ENSMUST00000107651 NacadQ5SWP3 1504 aa9.84□□□□□ -0.83
Slc44a1-205ENSMUST00000107651 Kdm5dQ62240 1548 aa9.79□□□□□ -0.84
Slc44a1-205ENSMUST00000107651 Rtl1Q7M732 1744 aa9.65□□□□□ -0.86
Slc44a1-205ENSMUST00000107651 Dcaf1Q80TR8 1506 aa9.64□□□□□ -0.87
Slc44a1-205ENSMUST00000107651 Sycp2Q9CUU3 1500 aa9.62□□□□□ -0.87
Slc44a1-205ENSMUST00000107651 Ccdc180J3QNE4 1664 aa9.55□□□□□ -0.88
Slc44a1-205ENSMUST00000107651 Rb1cc1Q9ESK9 1588 aa9.49□□□□□ -0.89
Slc44a1-205ENSMUST00000107651 BicraF8VPZ9 1578 aa9.42□□□□□ -0.9
Slc44a1-205ENSMUST00000107651 Rpgrip1Q9EPQ2 1331 aa9.39□□□□□ -0.91
Slc44a1-205ENSMUST00000107651 Ccdc136Q3TVA9 1136 aa9.35□□□□□ -0.91
Slc44a1-205ENSMUST00000107651 Baz1aO88379 1555 aa9.35□□□□□ -0.91
Slc44a1-205ENSMUST00000107651 Zcchc6Q5BLK4 1491 aaKnown RBP9.32□□□□□ -0.92
Slc44a1-205ENSMUST00000107651 Pds5bQ4VA53 1446 aaKnown RBP9.31□□□□□ -0.92
Slc44a1-205ENSMUST00000107651 Crybg2B7ZCC2 1516 aa9.29□□□□□ -0.92
Slc44a1-205ENSMUST00000107651 Dnajc5bQ9CQ94 199 aa9.25□□□□□ -0.93
Slc44a1-205ENSMUST00000107651 HrcG5E8J6 738 aa9.22□□□□□ -0.93
Slc44a1-205ENSMUST00000107651 Ehmt2Q9Z148 1263 aaKnown RBP9.21□□□□□ -0.94
Slc44a1-205ENSMUST00000107651 Atad2bE9Q166 1460 aaKnown RBP9.19□□□□□ -0.94
Slc44a1-205ENSMUST00000107651 Trim41Q5NCC3 630 aa9.16□□□□□ -0.94
Slc44a1-205ENSMUST00000107651 Ercc6F8VPZ5 1481 aa9.14□□□□□ -0.95
Slc44a1-205ENSMUST00000107651 Acin1Q9JIX8 1338 aaKnown RBP9.13□□□□□ -0.95
Slc44a1-205ENSMUST00000107651 Thoc2B1AZI6 1594 aaKnown RBP9.1□□□□□ -0.95
Slc44a1-205ENSMUST00000107651 Smarca4Q3TKT4 1613 aaKnown RBP9.08□□□□□ -0.96
Slc44a1-205ENSMUST00000107651 Smarca2Q6DIC0 1577 aa9.05□□□□□ -0.96
Slc44a1-205ENSMUST00000107651 Cecr2E9Q2Z1 1453 aa9.04□□□□□ -0.96
Slc44a1-205ENSMUST00000107651 Iqgap2Q3UQ44 1575 aa9.03□□□□□ -0.96
Slc44a1-205ENSMUST00000107651 Cngb1E1AZ71 1325 aa9.01□□□□□ -0.97
Slc44a1-205ENSMUST00000107651 Cc2d2aQ8CFW7 1633 aa9.01□□□□□ -0.97
Slc44a1-205ENSMUST00000107651 Phldb1Q6PDH0 1371 aaKnown RBP8.96□□□□□ -0.97
Slc44a1-205ENSMUST00000107651 Ubl4bQ9CQ84 188 aa8.95□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Wdr62Q3U3T8 1523 aa8.93□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Fam135aQ6NS59 1506 aa8.93□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Frmpd1A2AKB4 1549 aa8.93□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Gab3Q8BSM5 595 aa8.92□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Esf1Q3V1V3 845 aaKnown RBP8.91□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Brd4Q9ESU6 1400 aaKnown RBP8.91□□□□□ -0.98
Slc44a1-205ENSMUST00000107651 Baz1bQ9Z277 1479 aa8.87□□□□□ -0.99
Slc44a1-205ENSMUST00000107651 CftrP26361 1476 aa8.86□□□□□ -0.99
Slc44a1-205ENSMUST00000107651 Cep164Q5DU05 1446 aa8.86□□□□□ -0.99
Slc44a1-205ENSMUST00000107651 Cttnbp2B9EJA2 1648 aa8.83□□□□□ -1
Slc44a1-205ENSMUST00000107651 Synj1Q8CHC4 1574 aa8.81□□□□□ -1
Slc44a1-205ENSMUST00000107651 Mrc2Q64449 1479 aa8.79□□□□□ -1
Slc44a1-205ENSMUST00000107651 Pcgf6Q99NA9 353 aa8.77□□□□□ -1.01
Slc44a1-205ENSMUST00000107651 Chic1Q8CBW7 227 aa8.75□□□□□ -1.01
Slc44a1-205ENSMUST00000107651 Rsf1E9PWW9 1441 aaKnown RBP8.75□□□□□ -1.01
Slc44a1-205ENSMUST00000107651 Kif15Q6P9L6 1387 aa8.73□□□□□ -1.01
Slc44a1-205ENSMUST00000107651 Npm1Q61937 292 aaKnown RBP8.7□□□□□ -1.02
Slc44a1-205ENSMUST00000107651 Zeb1Q64318 1117 aa8.7□□□□□ -1.02
Slc44a1-205ENSMUST00000107651 NefmP08553 848 aa8.7□□□□□ -1.02
Slc44a1-205ENSMUST00000107651 Cux2P70298 1426 aa8.69□□□□□ -1.02
Slc44a1-205ENSMUST00000107651 Unc13aQ4KUS2 1712 aa8.69□□□□□ -1.02
Slc44a1-205ENSMUST00000107651 Golga3P55937 1487 aa8.67□□□□□ -1.02
Slc44a1-205ENSMUST00000107651 Il27Q8K3I6 234 aa8.64□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Myt1lP97500 1187 aa8.63□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Supt5hO55201 1082 aaKnown RBP8.63□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Npm2Q80W85 207 aa8.63□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 UbtfP25976 765 aaKnown RBP8.61□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Mier1Q5UAK0 511 aa8.61□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Ccdc88bQ4QRL3 1481 aa8.59□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Las1lA2BE28 776 aaKnown RBP8.59□□□□□ -1.03
Slc44a1-205ENSMUST00000107651 Lamc3Q9R0B6 1581 aa8.57□□□□□ -1.04
Slc44a1-205ENSMUST00000107651 Ccdc18Q640L5 1455 aa8.57□□□□□ -1.04
Slc44a1-205ENSMUST00000107651 Wdr66E9Q743 1299 aa8.55□□□□□ -1.04
Slc44a1-205ENSMUST00000107651 Lrriq1Q0P5X1 1673 aa8.53□□□□□ -1.04
Slc44a1-205ENSMUST00000107651 Kif21aQ9QXL2 1672 aa8.52□□□□□ -1.05
Slc44a1-205ENSMUST00000107651 Dhx29Q6PGC1 1365 aaKnown RBP8.51□□□□□ -1.05
Slc44a1-205ENSMUST00000107651 LrpprcQ6PB66 1392 aaKnown RBP8.49□□□□□ -1.05
Slc44a1-205ENSMUST00000107651 Urb2E9Q7L1 1524 aaKnown RBP8.47□□□□□ -1.05
Slc44a1-205ENSMUST00000107651 Fmn1Q05860 1466 aa8.46□□□□□ -1.05
Slc44a1-205ENSMUST00000107651 Plb1Q3TTY0 1478 aa8.45□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Top2bQ64511 1612 aa8.44□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Dnajc5P60904 198 aa8.44□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Camsap1A2AHC3 1581 aa8.43□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 TnnQ80Z71 1560 aa8.43□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Eif4g3Q80XI3 1579 aaKnown RBP8.42□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Crocc2F6XLV1 1638 aa8.41□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Pelp1Q9DBD5 1123 aaKnown RBP8.41□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 PogzQ8BZH4 1409 aaKnown RBP8.41□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Sall2Q9QX96 1004 aa8.4□□□□□ -1.06
Slc44a1-205ENSMUST00000107651 Ift140E9PY46 1464 aa8.39□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Pabpn1Q8CCS6 302 aaKnown RBP8.39□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Clip1Q922J3 1391 aa8.39□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Plekhg3Q4VAC9 1341 aa8.38□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Neurod1Q60867 357 aa8.37□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Duox2A2AQ99 1517 aa8.37□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 TonslQ6NZL6 1363 aa8.36□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Cep162Q6ZQ06 1403 aa8.36□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Rapgef2Q8CHG7 1496 aa8.35□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Ap3b1Q9Z1T1 1105 aa8.35□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Shroom2A2ALU4 1481 aa8.34□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Grin2bQ01097 1482 aa8.34□□□□□ -1.07
Slc44a1-205ENSMUST00000107651 Cdk11bP24788 784 aaKnown RBP8.32□□□□□ -1.08
Slc44a1-205ENSMUST00000107651 Efcab5A0JP43 1406 aa8.32□□□□□ -1.08
Slc44a1-205ENSMUST00000107651 ClspnQ80YR7 1315 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms