RNA–Protein interactions for RNA: ENSMUST00000107646.8

Slc44a1-203, Transcript of Choline transporter-like protein 1, mousemouse

TSL 5 BASIC

Gene Slc44a1, Length 1,974 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1-203ENSMUST00000107646 NischQ80TM9 1593 aa47.47■■■■■ 5.19
Slc44a1-203ENSMUST00000107646 Gm35339A0A140LHH9 1649 aa47.38■■■■■ 5.17
Slc44a1-203ENSMUST00000107646 Abcc9P70170 1546 aa46.03■■■■■ 4.96
Slc44a1-203ENSMUST00000107646 Abcc8B2RUS7 1588 aa45.48■■■■■ 4.87
Slc44a1-203ENSMUST00000107646 ScribQ80U72 1612 aa43■■■■■ 4.47
Slc44a1-203ENSMUST00000107646 Rhox8Q6VSS7 320 aa42.52■■■■■ 4.4
Slc44a1-203ENSMUST00000107646 Dcaf1Q80TR8 1506 aa42.28■■■■■ 4.36
Slc44a1-203ENSMUST00000107646 Kdm5dQ62240 1548 aa41.96■■■■■ 4.31
Slc44a1-203ENSMUST00000107646 NacadQ5SWP3 1504 aa41.92■■■■■ 4.3
Slc44a1-203ENSMUST00000107646 Rb1cc1Q9ESK9 1588 aa41.47■■■■■ 4.23
Slc44a1-203ENSMUST00000107646 Ccdc180J3QNE4 1664 aa41.06■■■■■ 4.16
Slc44a1-203ENSMUST00000107646 Sycp2Q9CUU3 1500 aa41.02■■■■■ 4.16
Slc44a1-203ENSMUST00000107646 Baz1aO88379 1555 aa40.99■■■■■ 4.15
Slc44a1-203ENSMUST00000107646 Rtl1Q7M732 1744 aa40.73■■■■■ 4.11
Slc44a1-203ENSMUST00000107646 Crybg2B7ZCC2 1516 aa40.64■■■■■ 4.1
Slc44a1-203ENSMUST00000107646 Zcchc6Q5BLK4 1491 aaKnown RBP40.23■■■■■ 4.03
Slc44a1-203ENSMUST00000107646 BicraF8VPZ9 1578 aa40.18■■■■■ 4.02
Slc44a1-203ENSMUST00000107646 Smarca2Q6DIC0 1577 aa39.91■■■■□ 3.98
Slc44a1-203ENSMUST00000107646 Ccdc136Q3TVA9 1136 aa39.55■■■■□ 3.92
Slc44a1-203ENSMUST00000107646 Cecr2E9Q2Z1 1453 aa39.27■■■■□ 3.88
Slc44a1-203ENSMUST00000107646 Trim41Q5NCC3 630 aa39.03■■■■□ 3.84
Slc44a1-203ENSMUST00000107646 Brd4Q9ESU6 1400 aaKnown RBP38.97■■■■□ 3.83
Slc44a1-203ENSMUST00000107646 Smarca4Q3TKT4 1613 aaKnown RBP38.94■■■■□ 3.82
Slc44a1-203ENSMUST00000107646 Pds5bQ4VA53 1446 aaKnown RBP38.89■■■■□ 3.82
Slc44a1-203ENSMUST00000107646 Atad2bE9Q166 1460 aaKnown RBP38.77■■■■□ 3.8
Slc44a1-203ENSMUST00000107646 Synj1Q8CHC4 1574 aa38.67■■■■□ 3.78
Slc44a1-203ENSMUST00000107646 CftrP26361 1476 aa38.64■■■■□ 3.78
Slc44a1-203ENSMUST00000107646 Iqgap2Q3UQ44 1575 aa38.55■■■■□ 3.76
Slc44a1-203ENSMUST00000107646 Cttnbp2B9EJA2 1648 aa38.51■■■■□ 3.76
Slc44a1-203ENSMUST00000107646 Esf1Q3V1V3 845 aaKnown RBP38.21■■■■□ 3.71
Slc44a1-203ENSMUST00000107646 Ercc6F8VPZ5 1481 aa38.1■■■■□ 3.69
Slc44a1-203ENSMUST00000107646 HrcG5E8J6 738 aa38.08■■■■□ 3.69
Slc44a1-203ENSMUST00000107646 Golga3P55937 1487 aa38.06■■■■□ 3.68
Slc44a1-203ENSMUST00000107646 Wdr62Q3U3T8 1523 aa38■■■■□ 3.67
Slc44a1-203ENSMUST00000107646 Cngb1E1AZ71 1325 aa37.99■■■■□ 3.67
Slc44a1-203ENSMUST00000107646 Frmpd1A2AKB4 1549 aa37.97■■■■□ 3.67
Slc44a1-203ENSMUST00000107646 Thoc2B1AZI6 1594 aaKnown RBP37.94■■■■□ 3.66
Slc44a1-203ENSMUST00000107646 Top2bQ64511 1612 aa37.75■■■■□ 3.63
Slc44a1-203ENSMUST00000107646 Phldb1Q6PDH0 1371 aaKnown RBP37.51■■■■□ 3.6
Slc44a1-203ENSMUST00000107646 Cc2d2aQ8CFW7 1633 aa37.45■■■■□ 3.59
Slc44a1-203ENSMUST00000107646 Rsf1E9PWW9 1441 aaKnown RBP37.42■■■■□ 3.58
Slc44a1-203ENSMUST00000107646 Fam135aQ6NS59 1506 aa37.38■■■■□ 3.57
Slc44a1-203ENSMUST00000107646 Unc13aQ4KUS2 1712 aa37.38■■■■□ 3.57
Slc44a1-203ENSMUST00000107646 Ccdc88bQ4QRL3 1481 aa37.37■■■■□ 3.57
Slc44a1-203ENSMUST00000107646 Cep164Q5DU05 1446 aa37.36■■■■□ 3.57
Slc44a1-203ENSMUST00000107646 Fmn1Q05860 1466 aa37.34■■■■□ 3.57
Slc44a1-203ENSMUST00000107646 Chic1Q8CBW7 227 aa37.33■■■■□ 3.57
Slc44a1-203ENSMUST00000107646 Dnajc5bQ9CQ94 199 aa37.2■■■■□ 3.55
Slc44a1-203ENSMUST00000107646 Ubl4bQ9CQ84 188 aa37.17■■■■□ 3.54
Slc44a1-203ENSMUST00000107646 Lamc3Q9R0B6 1581 aa37.17■■■■□ 3.54
Slc44a1-203ENSMUST00000107646 Kif15Q6P9L6 1387 aa37.14■■■■□ 3.54
Slc44a1-203ENSMUST00000107646 TnnQ80Z71 1560 aa37.12■■■■□ 3.53
Slc44a1-203ENSMUST00000107646 Baz1bQ9Z277 1479 aa36.99■■■■□ 3.51
Slc44a1-203ENSMUST00000107646 Top2aQ01320 1528 aaKnown RBP36.86■■■■□ 3.49
Slc44a1-203ENSMUST00000107646 Cux2P70298 1426 aa36.79■■■■□ 3.48
Slc44a1-203ENSMUST00000107646 Gab3Q8BSM5 595 aa36.72■■■■□ 3.47
Slc44a1-203ENSMUST00000107646 Ccdc18Q640L5 1455 aa36.7■■■■□ 3.47
Slc44a1-203ENSMUST00000107646 Camsap1A2AHC3 1581 aa36.66■■■■□ 3.46
Slc44a1-203ENSMUST00000107646 Il27Q8K3I6 234 aa36.64■■■■□ 3.46
Slc44a1-203ENSMUST00000107646 Npm1Q61937 292 aaKnown RBP36.6■■■■□ 3.45
Slc44a1-203ENSMUST00000107646 Mrc2Q64449 1479 aa36.58■■■■□ 3.45
Slc44a1-203ENSMUST00000107646 Rapgef2Q8CHG7 1496 aa36.35■■■■□ 3.41
Slc44a1-203ENSMUST00000107646 Grin2bQ01097 1482 aa36.32■■■■□ 3.41
Slc44a1-203ENSMUST00000107646 LrpprcQ6PB66 1392 aaKnown RBP36.3■■■■□ 3.4
Slc44a1-203ENSMUST00000107646 NrkQ9R0G8 1455 aa36.28■■■■□ 3.4
Slc44a1-203ENSMUST00000107646 Npm2Q80W85 207 aa36.23■■■■□ 3.39
Slc44a1-203ENSMUST00000107646 Shroom4Q1W617 1475 aa36.16■■■■□ 3.38
Slc44a1-203ENSMUST00000107646 PogzQ8BZH4 1409 aaKnown RBP36.16■■■■□ 3.38
Slc44a1-203ENSMUST00000107646 PtprkP35822 1457 aa36.14■■■■□ 3.38
Slc44a1-203ENSMUST00000107646 Dhx29Q6PGC1 1365 aaKnown RBP36.11■■■■□ 3.37
Slc44a1-203ENSMUST00000107646 Kif21aQ9QXL2 1672 aa36.1■■■■□ 3.37
Slc44a1-203ENSMUST00000107646 Cep162Q6ZQ06 1403 aa36.08■■■■□ 3.37
Slc44a1-203ENSMUST00000107646 Efcab5A0JP43 1406 aa36.05■■■■□ 3.36
Slc44a1-203ENSMUST00000107646 Duox2A2AQ99 1517 aa36.03■■■■□ 3.36
Slc44a1-203ENSMUST00000107646 Crocc2F6XLV1 1638 aa35.9■■■■□ 3.34
Slc44a1-203ENSMUST00000107646 Eif4g1Q6NZJ6 1600 aaKnown RBP35.89■■■■□ 3.34
Slc44a1-203ENSMUST00000107646 Arhgap35Q91YM2 1499 aa35.85■■■■□ 3.33
Slc44a1-203ENSMUST00000107646 Myt1lP97500 1187 aa35.84■■■■□ 3.33
Slc44a1-203ENSMUST00000107646 Zeb1Q64318 1117 aa35.8■■■■□ 3.32
Slc44a1-203ENSMUST00000107646 Mroh2bQ7M6Y6 1581 aa35.75■■■■□ 3.31
Slc44a1-203ENSMUST00000107646 Map3k1P53349 1493 aa35.75■■■■□ 3.31
Slc44a1-203ENSMUST00000107646 Plb1Q3TTY0 1478 aa35.71■■■■□ 3.31
Slc44a1-203ENSMUST00000107646 Samd9lQ69Z37 1561 aa35.7■■■■□ 3.31
Slc44a1-203ENSMUST00000107646 Ehmt2Q9Z148 1263 aaKnown RBP35.67■■■■□ 3.3
Slc44a1-203ENSMUST00000107646 Urb2E9Q7L1 1524 aaKnown RBP35.65■■■■□ 3.3
Slc44a1-203ENSMUST00000107646 Lrriq1Q0P5X1 1673 aa35.62■■■■□ 3.29
Slc44a1-203ENSMUST00000107646 Clip1Q922J3 1391 aa35.56■■■■□ 3.28
Slc44a1-203ENSMUST00000107646 SynmQ70IV5 1561 aa35.55■■■■□ 3.28
Slc44a1-203ENSMUST00000107646 AqrQ8CFQ3 1481 aaKnown RBP35.53■■■■□ 3.28
Slc44a1-203ENSMUST00000107646 Rad54l2Q99NG0 1466 aa35.51■■■■□ 3.27
Slc44a1-203ENSMUST00000107646 Ift140E9PY46 1464 aa35.48■■■■□ 3.27
Slc44a1-203ENSMUST00000107646 Carmil1Q6EDY6 1374 aa35.47■■■■□ 3.27
Slc44a1-203ENSMUST00000107646 Disp1Q3TDN0 1521 aa35.43■■■■□ 3.26
Slc44a1-203ENSMUST00000107646 Rpgrip1Q9EPQ2 1331 aa35.37■■■■□ 3.25
Slc44a1-203ENSMUST00000107646 Acin1Q9JIX8 1338 aaKnown RBP35.33■■■■□ 3.25
Slc44a1-203ENSMUST00000107646 Magi3Q9EQJ9 1476 aa35.32■■■■□ 3.25
Slc44a1-203ENSMUST00000107646 Grin2aP35436 1464 aa35.3■■■■□ 3.24
Slc44a1-203ENSMUST00000107646 Eea1Q8BL66 1411 aa35.27■■■■□ 3.24
Slc44a1-203ENSMUST00000107646 Pla2r1Q62028 1487 aa35.27■■■■□ 3.24
Slc44a1-203ENSMUST00000107646 Pbrm1Q8BSQ9 1634 aaKnown RBP35.24■■■■□ 3.23
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms