RNA–Protein interactions for RNA: ENSMUST00000107474.7

Rara-203, Transcript of Retinoic acid receptor alpha, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Rara, Length 2,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-203ENSMUST00000107474 Gm35339A0A140LHH9 1649 aa28.31■■■□□ 2.12
Rara-203ENSMUST00000107474 NischQ80TM9 1593 aa28.1■■■□□ 2.09
Rara-203ENSMUST00000107474 Abcc9P70170 1546 aa27.26■■□□□ 1.95
Rara-203ENSMUST00000107474 Abcc8B2RUS7 1588 aa27.06■■□□□ 1.92
Rara-203ENSMUST00000107474 ScribQ80U72 1612 aa25.82■■□□□ 1.72
Rara-203ENSMUST00000107474 Rtl1Q7M732 1744 aa25.61■■□□□ 1.69
Rara-203ENSMUST00000107474 Rhox8Q6VSS7 320 aa25.33■■□□□ 1.65
Rara-203ENSMUST00000107474 Ccdc180J3QNE4 1664 aa25.13■■□□□ 1.61
Rara-203ENSMUST00000107474 Dcaf1Q80TR8 1506 aa25.09■■□□□ 1.61
Rara-203ENSMUST00000107474 NacadQ5SWP3 1504 aa25.07■■□□□ 1.6
Rara-203ENSMUST00000107474 Kdm5dQ62240 1548 aa25.06■■□□□ 1.6
Rara-203ENSMUST00000107474 Sycp2Q9CUU3 1500 aa24.56■■□□□ 1.52
Rara-203ENSMUST00000107474 Rb1cc1Q9ESK9 1588 aa24.52■■□□□ 1.51
Rara-203ENSMUST00000107474 Zcchc6Q5BLK4 1491 aaKnown RBP24.43■■□□□ 1.5
Rara-203ENSMUST00000107474 Rpgrip1Q9EPQ2 1331 aa24.34■■□□□ 1.49
Rara-203ENSMUST00000107474 Baz1aO88379 1555 aa24.23■■□□□ 1.47
Rara-203ENSMUST00000107474 BicraF8VPZ9 1578 aa24.15■■□□□ 1.46
Rara-203ENSMUST00000107474 Crybg2B7ZCC2 1516 aa24.13■■□□□ 1.45
Rara-203ENSMUST00000107474 HrcG5E8J6 738 aa23.86■■□□□ 1.41
Rara-203ENSMUST00000107474 Acin1Q9JIX8 1338 aaKnown RBP23.7■■□□□ 1.38
Rara-203ENSMUST00000107474 Smarca2Q6DIC0 1577 aa23.57■■□□□ 1.36
Rara-203ENSMUST00000107474 Ccdc136Q3TVA9 1136 aa23.41■■□□□ 1.34
Rara-203ENSMUST00000107474 Pds5bQ4VA53 1446 aaKnown RBP23.38■■□□□ 1.33
Rara-203ENSMUST00000107474 Cecr2E9Q2Z1 1453 aa23.3■■□□□ 1.32
Rara-203ENSMUST00000107474 Atad2bE9Q166 1460 aaKnown RBP23.26■■□□□ 1.31
Rara-203ENSMUST00000107474 Smarca4Q3TKT4 1613 aaKnown RBP23.23■■□□□ 1.31
Rara-203ENSMUST00000107474 Trim41Q5NCC3 630 aa23.14■■□□□ 1.29
Rara-203ENSMUST00000107474 Ehmt2Q9Z148 1263 aaKnown RBP23.12■■□□□ 1.29
Rara-203ENSMUST00000107474 Cep164Q5DU05 1446 aa23.04■■□□□ 1.28
Rara-203ENSMUST00000107474 Iqgap2Q3UQ44 1575 aa23.03■■□□□ 1.28
Rara-203ENSMUST00000107474 Thoc2B1AZI6 1594 aaKnown RBP23.01■■□□□ 1.27
Rara-203ENSMUST00000107474 Brd4Q9ESU6 1400 aaKnown RBP22.93■■□□□ 1.26
Rara-203ENSMUST00000107474 CftrP26361 1476 aa22.87■■□□□ 1.25
Rara-203ENSMUST00000107474 Ercc6F8VPZ5 1481 aa22.85■■□□□ 1.25
Rara-203ENSMUST00000107474 Synj1Q8CHC4 1574 aa22.84■■□□□ 1.25
Rara-203ENSMUST00000107474 Cttnbp2B9EJA2 1648 aa22.81■■□□□ 1.24
Rara-203ENSMUST00000107474 Dnajc5bQ9CQ94 199 aa22.79■■□□□ 1.24
Rara-203ENSMUST00000107474 Wdr62Q3U3T8 1523 aa22.78■■□□□ 1.24
Rara-203ENSMUST00000107474 Pcgf6Q99NA9 353 aa22.78■■□□□ 1.24
Rara-203ENSMUST00000107474 Frmpd1A2AKB4 1549 aa22.75■■□□□ 1.23
Rara-203ENSMUST00000107474 Cc2d2aQ8CFW7 1633 aa22.64■■□□□ 1.21
Rara-203ENSMUST00000107474 Fam135aQ6NS59 1506 aa22.59■■□□□ 1.21
Rara-203ENSMUST00000107474 Rsf1E9PWW9 1441 aaKnown RBP22.52■■□□□ 1.2
Rara-203ENSMUST00000107474 Phldb1Q6PDH0 1371 aaKnown RBP22.52■■□□□ 1.2
Rara-203ENSMUST00000107474 Unc13aQ4KUS2 1712 aa22.44■■□□□ 1.18
Rara-203ENSMUST00000107474 Golga3P55937 1487 aa22.44■■□□□ 1.18
Rara-203ENSMUST00000107474 Esf1Q3V1V3 845 aaKnown RBP22.42■■□□□ 1.18
Rara-203ENSMUST00000107474 Cngb1E1AZ71 1325 aa22.41■■□□□ 1.18
Rara-203ENSMUST00000107474 Chic1Q8CBW7 227 aa22.4■■□□□ 1.18
Rara-203ENSMUST00000107474 Baz1bQ9Z277 1479 aa22.38■■□□□ 1.17
Rara-203ENSMUST00000107474 Ccdc88bQ4QRL3 1481 aa22.31■■□□□ 1.16
Rara-203ENSMUST00000107474 Supt5hO55201 1082 aaKnown RBP22.28■■□□□ 1.16
Rara-203ENSMUST00000107474 Ubl4bQ9CQ84 188 aa22.26■■□□□ 1.15
Rara-203ENSMUST00000107474 NefmP08553 848 aa22.25■■□□□ 1.15
Rara-203ENSMUST00000107474 Gab3Q8BSM5 595 aa22.23■■□□□ 1.15
Rara-203ENSMUST00000107474 Top2bQ64511 1612 aa22.21■■□□□ 1.15
Rara-203ENSMUST00000107474 Lamc3Q9R0B6 1581 aa22.1■■□□□ 1.13
Rara-203ENSMUST00000107474 Kif15Q6P9L6 1387 aa22.05■■□□□ 1.12
Rara-203ENSMUST00000107474 Mrc2Q64449 1479 aa22.04■■□□□ 1.12
Rara-203ENSMUST00000107474 Mier1Q5UAK0 511 aa22.04■■□□□ 1.12
Rara-203ENSMUST00000107474 TnnQ80Z71 1560 aa21.99■■□□□ 1.11
Rara-203ENSMUST00000107474 Cux2P70298 1426 aa21.95■■□□□ 1.1
Rara-203ENSMUST00000107474 Fmn1Q05860 1466 aa21.94■■□□□ 1.1
Rara-203ENSMUST00000107474 Zeb1Q64318 1117 aa21.91■■□□□ 1.1
Rara-203ENSMUST00000107474 Rapgef2Q8CHG7 1496 aa21.86■■□□□ 1.09
Rara-203ENSMUST00000107474 Neurod1Q60867 357 aa21.81■■□□□ 1.08
Rara-203ENSMUST00000107474 Top2aQ01320 1528 aaKnown RBP21.76■■□□□ 1.07
Rara-203ENSMUST00000107474 Ccdc18Q640L5 1455 aa21.75■■□□□ 1.07
Rara-203ENSMUST00000107474 Npm1Q61937 292 aaKnown RBP21.74■■□□□ 1.07
Rara-203ENSMUST00000107474 Camsap1A2AHC3 1581 aa21.73■■□□□ 1.07
Rara-203ENSMUST00000107474 Sall2Q9QX96 1004 aa21.7■■□□□ 1.06
Rara-203ENSMUST00000107474 Kif21aQ9QXL2 1672 aa21.67■■□□□ 1.06
Rara-203ENSMUST00000107474 Cep162Q6ZQ06 1403 aa21.64■■□□□ 1.05
Rara-203ENSMUST00000107474 Las1lA2BE28 776 aaKnown RBP21.61■■□□□ 1.05
Rara-203ENSMUST00000107474 Il27Q8K3I6 234 aa21.61■■□□□ 1.05
Rara-203ENSMUST00000107474 LrpprcQ6PB66 1392 aaKnown RBP21.58■■□□□ 1.05
Rara-203ENSMUST00000107474 UbtfP25976 765 aaKnown RBP21.58■■□□□ 1.05
Rara-203ENSMUST00000107474 Dhx29Q6PGC1 1365 aaKnown RBP21.52■■□□□ 1.04
Rara-203ENSMUST00000107474 Lrriq1Q0P5X1 1673 aa21.51■■□□□ 1.03
Rara-203ENSMUST00000107474 Grin2bQ01097 1482 aa21.49■■□□□ 1.03
Rara-203ENSMUST00000107474 PogzQ8BZH4 1409 aaKnown RBP21.49■■□□□ 1.03
Rara-203ENSMUST00000107474 Anks4bQ8K3X6 423 aa21.47■■□□□ 1.03
Rara-203ENSMUST00000107474 Eif4g1Q6NZJ6 1600 aaKnown RBP21.47■■□□□ 1.03
Rara-203ENSMUST00000107474 Crocc2F6XLV1 1638 aa21.42■■□□□ 1.02
Rara-203ENSMUST00000107474 ClspnQ80YR7 1315 aa21.41■■□□□ 1.02
Rara-203ENSMUST00000107474 Duox2A2AQ99 1517 aa21.4■■□□□ 1.02
Rara-203ENSMUST00000107474 NrkQ9R0G8 1455 aa21.39■■□□□ 1.02
Rara-203ENSMUST00000107474 Myt1lP97500 1187 aa21.38■■□□□ 1.01
Rara-203ENSMUST00000107474 Wdr66E9Q743 1299 aa21.37■■□□□ 1.01
Rara-203ENSMUST00000107474 Urb2E9Q7L1 1524 aaKnown RBP21.36■■□□□ 1.01
Rara-203ENSMUST00000107474 Efcab5A0JP43 1406 aa21.36■■□□□ 1.01
Rara-203ENSMUST00000107474 Plb1Q3TTY0 1478 aa21.36■■□□□ 1.01
Rara-203ENSMUST00000107474 Clip1Q922J3 1391 aa21.35■■□□□ 1.01
Rara-203ENSMUST00000107474 Npm2Q80W85 207 aa21.34■■□□□ 1.01
Rara-203ENSMUST00000107474 Aebp2Q9Z248 504 aaKnown RBP21.34■■□□□ 1.01
Rara-203ENSMUST00000107474 TonslQ6NZL6 1363 aa21.29■■□□□ 1
Rara-203ENSMUST00000107474 Shroom4Q1W617 1475 aa21.29■■□□□ 1
Rara-203ENSMUST00000107474 Ncapd3Q6ZQK0 1506 aa21.28■■□□□ 1
Rara-203ENSMUST00000107474 PtprkP35822 1457 aa21.27■■□□□ 1
Rara-203ENSMUST00000107474 Cdk11bP24788 784 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms