RNA–Protein interactions for RNA: ENSMUST00000097352.9

Pknox1-201, Transcript of Homeobox protein PKNOX1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pknox1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1-201ENSMUST00000097352 Amer1Q7TS75 1132 aa15.16■□□□□ 0.02
Pknox1-201ENSMUST00000097352 DiexfQ8BTT6 772 aaKnown RBP15.14■□□□□ 0.01
Pknox1-201ENSMUST00000097352 Rhox8Q6VSS7 320 aa15.07■□□□□ 0
Pknox1-201ENSMUST00000097352 Ttbk1Q6PCN3 1308 aa15□□□□□ -0.01
Pknox1-201ENSMUST00000097352 Ube2uB1AUC4 352 aa14.6□□□□□ -0.07
Pknox1-201ENSMUST00000097352 Myt1Q8CFC2 1127 aa14.51□□□□□ -0.09
Pknox1-201ENSMUST00000097352 CenpbP27790 599 aa14.47□□□□□ -0.09
Pknox1-201ENSMUST00000097352 Las1lA2BE28 776 aaKnown RBP14.34□□□□□ -0.11
Pknox1-201ENSMUST00000097352 Plppr3Q7TPB0 716 aa14.32□□□□□ -0.12
Pknox1-201ENSMUST00000097352 Bcl11aQ9QYE3 773 aa14.19□□□□□ -0.14
Pknox1-201ENSMUST00000097352 Gm35339A0A140LHH9 1649 aa14.18□□□□□ -0.14
Pknox1-201ENSMUST00000097352 Rpgrip1Q9EPQ2 1331 aa14.18□□□□□ -0.14
Pknox1-201ENSMUST00000097352 Ehmt2Q9Z148 1263 aaKnown RBP14.14□□□□□ -0.15
Pknox1-201ENSMUST00000097352 Pcgf6Q99NA9 353 aa14.13□□□□□ -0.15
Pknox1-201ENSMUST00000097352 CatipB9EKE5 520 aa13.99□□□□□ -0.17
Pknox1-201ENSMUST00000097352 NischQ80TM9 1593 aa13.97□□□□□ -0.17
Pknox1-201ENSMUST00000097352 PrkcshO08795 521 aa13.87□□□□□ -0.19
Pknox1-201ENSMUST00000097352 ArxO35085 564 aa13.82□□□□□ -0.2
Pknox1-201ENSMUST00000097352 Gm38655A0A286YDK6 273 aa13.61□□□□□ -0.23
Pknox1-201ENSMUST00000097352 Eif5bQ05D44 1216 aaKnown RBP13.53□□□□□ -0.24
Pknox1-201ENSMUST00000097352 Pknox2Q8BG99 474 aa13.5□□□□□ -0.25
Pknox1-201ENSMUST00000097352 Gtf3c5Q8R2T8 520 aa13.5□□□□□ -0.25
Pknox1-201ENSMUST00000097352 Cngb1E1AZ71 1325 aa13.49□□□□□ -0.25
Pknox1-201ENSMUST00000097352 Q8BT18 775 aa13.49□□□□□ -0.25
Pknox1-201ENSMUST00000097352 Abcc8B2RUS7 1588 aa13.37□□□□□ -0.27
Pknox1-201ENSMUST00000097352 BccipQ9CWI3 316 aa13.37□□□□□ -0.27
Pknox1-201ENSMUST00000097352 Abcc9P70170 1546 aa13.37□□□□□ -0.27
Pknox1-201ENSMUST00000097352 1700123L14RikQ3V2K7 440 aa13.27□□□□□ -0.28
Pknox1-201ENSMUST00000097352 Neurod1Q60867 357 aa13.19□□□□□ -0.3
Pknox1-201ENSMUST00000097352 TimelessQ9R1X4 1197 aa13.18□□□□□ -0.3
Pknox1-201ENSMUST00000097352 ScribQ80U72 1612 aa13.09□□□□□ -0.31
Pknox1-201ENSMUST00000097352 Podxl2Q8CAE9 603 aa13.08□□□□□ -0.32
Pknox1-201ENSMUST00000097352 Slc4a1apE9PX68 744 aa13.07□□□□□ -0.32
Pknox1-201ENSMUST00000097352 Aplp2Q06335 707 aa13.06□□□□□ -0.32
Pknox1-201ENSMUST00000097352 Ccdc136Q3TVA9 1136 aa13.06□□□□□ -0.32
Pknox1-201ENSMUST00000097352 Znf316Q6PGE4 1016 aa13.05□□□□□ -0.32
Pknox1-201ENSMUST00000097352 NrdcQ8BHG1 1161 aa13.02□□□□□ -0.33
Pknox1-201ENSMUST00000097352 HrcG5E8J6 738 aa12.98□□□□□ -0.33
Pknox1-201ENSMUST00000097352 Ifnlr1Q8CGK5 535 aa12.98□□□□□ -0.33
Pknox1-201ENSMUST00000097352 UbtfP25976 765 aaKnown RBP12.98□□□□□ -0.33
Pknox1-201ENSMUST00000097352 Arid3aQ62431 601 aa12.97□□□□□ -0.33
Pknox1-201ENSMUST00000097352 Csrnp3P59055 597 aa12.95□□□□□ -0.34
Pknox1-201ENSMUST00000097352 Pelp1Q9DBD5 1123 aaKnown RBP12.92□□□□□ -0.34
Pknox1-201ENSMUST00000097352 Fgd1P52734 960 aa12.85□□□□□ -0.35
Pknox1-201ENSMUST00000097352 Wdr66E9Q743 1299 aa12.85□□□□□ -0.35
Pknox1-201ENSMUST00000097352 Acin1Q9JIX8 1338 aaKnown RBP12.84□□□□□ -0.35
Pknox1-201ENSMUST00000097352 Rtl5Q5DTT4 599 aa12.84□□□□□ -0.35
Pknox1-201ENSMUST00000097352 Znf326O88291 580 aa12.83□□□□□ -0.36
Pknox1-201ENSMUST00000097352 Ythdc1E9Q5K9 736 aaKnown RBP12.82□□□□□ -0.36
Pknox1-201ENSMUST00000097352 Hdac5Q9Z2V6 1113 aa12.8□□□□□ -0.36
Pknox1-201ENSMUST00000097352 Cdk11bP24788 784 aaKnown RBP12.8□□□□□ -0.36
Pknox1-201ENSMUST00000097352 Rsph4aQ8BYM7 716 aa12.79□□□□□ -0.36
Pknox1-201ENSMUST00000097352 NefmP08553 848 aa12.79□□□□□ -0.36
Pknox1-201ENSMUST00000097352 Anks4bQ8K3X6 423 aa12.76□□□□□ -0.37
Pknox1-201ENSMUST00000097352 Anp32bQ9EST5 272 aaKnown RBP12.76□□□□□ -0.37
Pknox1-201ENSMUST00000097352 Ncbp3Q8BZR9 615 aaKnown RBP12.72□□□□□ -0.37
Pknox1-201ENSMUST00000097352 Supt5hO55201 1082 aaKnown RBP12.72□□□□□ -0.37
Pknox1-201ENSMUST00000097352 Zfp777B9EKF4 885 aa12.64□□□□□ -0.39
Pknox1-201ENSMUST00000097352 4930567H17RikQ3V0K5 233 aa12.64□□□□□ -0.39
Pknox1-201ENSMUST00000097352 Taok2Q6ZQ29 1240 aa12.61□□□□□ -0.39
Pknox1-201ENSMUST00000097352 Fbxo3Q9DC63 480 aa12.57□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Ppargc1bQ8VHJ7 1014 aa12.57□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Samd1D3YXK1 519 aa12.54□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Scaf1Q5U4C3 1256 aaKnown RBP12.54□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Fam71e1A1L3C1 212 aa12.53□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Plcd4Q8K3R3 807 aa12.53□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Rangap1P46061 589 aaKnown RBP12.53□□□□□ -0.4
Pknox1-201ENSMUST00000097352 Kcna4Q61423 654 aa12.5□□□□□ -0.41
Pknox1-201ENSMUST00000097352 NclP09405 707 aaKnown RBP12.5□□□□□ -0.41
Pknox1-201ENSMUST00000097352 Gtf3c3Q3TMP1 882 aa12.49□□□□□ -0.41
Pknox1-201ENSMUST00000097352 Trim41Q5NCC3 630 aa12.49□□□□□ -0.41
Pknox1-201ENSMUST00000097352 Vgll3P85442 326 aa12.49□□□□□ -0.41
Pknox1-201ENSMUST00000097352 Gab3Q8BSM5 595 aa12.48□□□□□ -0.41
Pknox1-201ENSMUST00000097352 Kdm5dQ62240 1548 aa12.47□□□□□ -0.41
Pknox1-201ENSMUST00000097352 Rtn4Q99P72 1162 aaKnown RBP12.47□□□□□ -0.41
Pknox1-201ENSMUST00000097352 AcrbpQ3V140 540 aa12.45□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Irx6Q9ER75 438 aa12.44□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Ube2q2Q8K2Z8 378 aa12.44□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Rbm10Q99KG3 930 aaKnown RBP12.44□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Skap1Q3UUV5 355 aa12.43□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Zeb1Q64318 1117 aa12.42□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Zcchc6Q5BLK4 1491 aaKnown RBP12.41□□□□□ -0.42
Pknox1-201ENSMUST00000097352 Esf1Q3V1V3 845 aaKnown RBP12.41□□□□□ -0.42
Pknox1-201ENSMUST00000097352 DekQ7TNV0 380 aaKnown RBP12.39□□□□□ -0.43
Pknox1-201ENSMUST00000097352 Irx3P81067 507 aa12.38□□□□□ -0.43
Pknox1-201ENSMUST00000097352 4933416C03RikQ3V063 378 aa12.36□□□□□ -0.43
Pknox1-201ENSMUST00000097352 NacadQ5SWP3 1504 aa12.35□□□□□ -0.43
Pknox1-201ENSMUST00000097352 Ripply1Q2WG77 201 aa12.34□□□□□ -0.43
Pknox1-201ENSMUST00000097352 Arid4bA2CG63 1314 aaKnown RBP12.34□□□□□ -0.43
Pknox1-201ENSMUST00000097352 Ccdc180J3QNE4 1664 aa12.33□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Dcaf1Q80TR8 1506 aa12.31□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Tshz2Q68FE9 1030 aa12.31□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Brd2Q7JJ13 798 aaKnown RBP12.31□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Zbtb7cQ8VCZ7 619 aa12.3□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Prdm10Q3UTQ7 1184 aa12.3□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Kiaa1211Q5PR69 1207 aa12.28□□□□□ -0.44
Pknox1-201ENSMUST00000097352 Rtl1Q7M732 1744 aa12.26□□□□□ -0.45
Pknox1-201ENSMUST00000097352 4933402E13RikQ9D4D2 429 aa12.24□□□□□ -0.45
Pknox1-201ENSMUST00000097352 Rb1cc1Q9ESK9 1588 aa12.24□□□□□ -0.45
Pknox1-201ENSMUST00000097352 Znf692Q3U381 531 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms