RNA–Protein interactions for RNA: ENSMUST00000091935.6

Pcdhga9-201, Transcript of Protocadherin gamma A9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhga9, Length 4,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9-201ENSMUST00000091935 Rhox8Q6VSS7 320 aa21.75■■□□□ 1.07
Pcdhga9-201ENSMUST00000091935 Rpgrip1Q9EPQ2 1331 aa21.53■■□□□ 1.04
Pcdhga9-201ENSMUST00000091935 Ehmt2Q9Z148 1263 aaKnown RBP21.27■■□□□ 1
Pcdhga9-201ENSMUST00000091935 Acin1Q9JIX8 1338 aaKnown RBP21■□□□□ 0.95
Pcdhga9-201ENSMUST00000091935 NischQ80TM9 1593 aa20.97■□□□□ 0.95
Pcdhga9-201ENSMUST00000091935 Pcgf6Q99NA9 353 aa20.96■□□□□ 0.95
Pcdhga9-201ENSMUST00000091935 Supt5hO55201 1082 aaKnown RBP20.42■□□□□ 0.86
Pcdhga9-201ENSMUST00000091935 Ccdc180J3QNE4 1664 aa20.42■□□□□ 0.86
Pcdhga9-201ENSMUST00000091935 Neurod1Q60867 357 aa20.31■□□□□ 0.84
Pcdhga9-201ENSMUST00000091935 Rtl1Q7M732 1744 aa20.27■□□□□ 0.84
Pcdhga9-201ENSMUST00000091935 Las1lA2BE28 776 aaKnown RBP20.01■□□□□ 0.79
Pcdhga9-201ENSMUST00000091935 Zeb1Q64318 1117 aa20.01■□□□□ 0.79
Pcdhga9-201ENSMUST00000091935 Abcc9P70170 1546 aa19.97■□□□□ 0.79
Pcdhga9-201ENSMUST00000091935 Trim41Q5NCC3 630 aa19.9■□□□□ 0.78
Pcdhga9-201ENSMUST00000091935 1700123L14RikQ3V2K7 440 aa19.82■□□□□ 0.76
Pcdhga9-201ENSMUST00000091935 Csrnp3P59055 597 aa19.76■□□□□ 0.75
Pcdhga9-201ENSMUST00000091935 Dcaf1Q80TR8 1506 aa19.76■□□□□ 0.75
Pcdhga9-201ENSMUST00000091935 Cngb1E1AZ71 1325 aa19.71■□□□□ 0.75
Pcdhga9-201ENSMUST00000091935 Ccdc136Q3TVA9 1136 aa19.68■□□□□ 0.74
Pcdhga9-201ENSMUST00000091935 HrcG5E8J6 738 aa19.63■□□□□ 0.73
Pcdhga9-201ENSMUST00000091935 CenpbP27790 599 aa19.6■□□□□ 0.73
Pcdhga9-201ENSMUST00000091935 Zcchc6Q5BLK4 1491 aaKnown RBP19.6■□□□□ 0.73
Pcdhga9-201ENSMUST00000091935 Gm38655A0A286YDK6 273 aa19.54■□□□□ 0.72
Pcdhga9-201ENSMUST00000091935 Sall2Q9QX96 1004 aa19.53■□□□□ 0.72
Pcdhga9-201ENSMUST00000091935 Abcc8B2RUS7 1588 aa19.45■□□□□ 0.7
Pcdhga9-201ENSMUST00000091935 Anks4bQ8K3X6 423 aa19.4■□□□□ 0.7
Pcdhga9-201ENSMUST00000091935 Gm35339A0A140LHH9 1649 aa19.38■□□□□ 0.69
Pcdhga9-201ENSMUST00000091935 DiexfQ8BTT6 772 aaKnown RBP19.37■□□□□ 0.69
Pcdhga9-201ENSMUST00000091935 Ppargc1bQ8VHJ7 1014 aa19.36■□□□□ 0.69
Pcdhga9-201ENSMUST00000091935 Wdr66E9Q743 1299 aa19.35■□□□□ 0.69
Pcdhga9-201ENSMUST00000091935 Esf1Q3V1V3 845 aaKnown RBP19.27■□□□□ 0.68
Pcdhga9-201ENSMUST00000091935 Myt1Q8CFC2 1127 aa19.25■□□□□ 0.67
Pcdhga9-201ENSMUST00000091935 NefmP08553 848 aa19.17■□□□□ 0.66
Pcdhga9-201ENSMUST00000091935 Mier1Q5UAK0 511 aa19.17■□□□□ 0.66
Pcdhga9-201ENSMUST00000091935 Gab3Q8BSM5 595 aa19.16■□□□□ 0.66
Pcdhga9-201ENSMUST00000091935 Cdk11bP24788 784 aaKnown RBP19.14■□□□□ 0.65
Pcdhga9-201ENSMUST00000091935 Aplp2Q06335 707 aa19.13■□□□□ 0.65
Pcdhga9-201ENSMUST00000091935 Nop58Q6DFW4 536 aaKnown RBP19.09■□□□□ 0.65
Pcdhga9-201ENSMUST00000091935 Bcl11aQ9QYE3 773 aa19.08■□□□□ 0.65
Pcdhga9-201ENSMUST00000091935 Aebp2Q9Z248 504 aaKnown RBP19.01■□□□□ 0.63
Pcdhga9-201ENSMUST00000091935 Mapk8ip2Q9ERE9 830 aa18.89■□□□□ 0.61
Pcdhga9-201ENSMUST00000091935 Fam71e1A1L3C1 212 aa18.85■□□□□ 0.61
Pcdhga9-201ENSMUST00000091935 UbtfP25976 765 aaKnown RBP18.77■□□□□ 0.6
Pcdhga9-201ENSMUST00000091935 PrkcshO08795 521 aa18.76■□□□□ 0.59
Pcdhga9-201ENSMUST00000091935 SafbD3YXK2 937 aaKnown RBP18.75■□□□□ 0.59
Pcdhga9-201ENSMUST00000091935 Ifnlr1Q8CGK5 535 aa18.73■□□□□ 0.59
Pcdhga9-201ENSMUST00000091935 Npm2Q80W85 207 aa18.72■□□□□ 0.59
Pcdhga9-201ENSMUST00000091935 ClspnQ80YR7 1315 aa18.71■□□□□ 0.59
Pcdhga9-201ENSMUST00000091935 Cep164Q5DU05 1446 aa18.7■□□□□ 0.58
Pcdhga9-201ENSMUST00000091935 Chic1Q8CBW7 227 aa18.62■□□□□ 0.57
Pcdhga9-201ENSMUST00000091935 Hnrnpul2Q00PI9 745 aaKnown RBP18.58■□□□□ 0.57
Pcdhga9-201ENSMUST00000091935 Ap3b1Q9Z1T1 1105 aa18.54■□□□□ 0.56
Pcdhga9-201ENSMUST00000091935 Rb1cc1Q9ESK9 1588 aa18.43■□□□□ 0.54
Pcdhga9-201ENSMUST00000091935 Myt1lP97500 1187 aa18.43■□□□□ 0.54
Pcdhga9-201ENSMUST00000091935 Ttbk1Q6PCN3 1308 aa18.4■□□□□ 0.54
Pcdhga9-201ENSMUST00000091935 TonslQ6NZL6 1363 aa18.4■□□□□ 0.54
Pcdhga9-201ENSMUST00000091935 NacadQ5SWP3 1504 aa18.33■□□□□ 0.52
Pcdhga9-201ENSMUST00000091935 Rsf1E9PWW9 1441 aaKnown RBP18.31■□□□□ 0.52
Pcdhga9-201ENSMUST00000091935 Amer1Q7TS75 1132 aa18.29■□□□□ 0.52
Pcdhga9-201ENSMUST00000091935 Brd4Q9ESU6 1400 aaKnown RBP18.29■□□□□ 0.52
Pcdhga9-201ENSMUST00000091935 Tnnt3Q9QZ47 272 aa18.27■□□□□ 0.52
Pcdhga9-201ENSMUST00000091935 Anp32aO35381 247 aa18.23■□□□□ 0.51
Pcdhga9-201ENSMUST00000091935 Ube2uB1AUC4 352 aa18.21■□□□□ 0.51
Pcdhga9-201ENSMUST00000091935 Baz1aO88379 1555 aa18.17■□□□□ 0.5
Pcdhga9-201ENSMUST00000091935 Eid3Q3V124 375 aa18.12■□□□□ 0.49
Pcdhga9-201ENSMUST00000091935 Nolc1E9Q5C9 702 aaKnown RBP18.1■□□□□ 0.49
Pcdhga9-201ENSMUST00000091935 Slc24a1Q91WD8 1130 aa18.09■□□□□ 0.49
Pcdhga9-201ENSMUST00000091935 Ccdc88bQ4QRL3 1481 aa18.06■□□□□ 0.48
Pcdhga9-201ENSMUST00000091935 Pelp1Q9DBD5 1123 aaKnown RBP18.06■□□□□ 0.48
Pcdhga9-201ENSMUST00000091935 Il27Q8K3I6 234 aa18.01■□□□□ 0.47
Pcdhga9-201ENSMUST00000091935 Plekhg3Q4VAC9 1341 aa17.99■□□□□ 0.47
Pcdhga9-201ENSMUST00000091935 Hdac5Q9Z2V6 1113 aa17.98■□□□□ 0.47
Pcdhga9-201ENSMUST00000091935 Calr4Q3TQS0 420 aa17.96■□□□□ 0.47
Pcdhga9-201ENSMUST00000091935 Rtl5Q5DTT4 599 aa17.93■□□□□ 0.46
Pcdhga9-201ENSMUST00000091935 Kdm5dQ62240 1548 aa17.91■□□□□ 0.46
Pcdhga9-201ENSMUST00000091935 Supt16hQ920B9 1047 aa17.9■□□□□ 0.46
Pcdhga9-201ENSMUST00000091935 Stra8P70278 393 aa17.89■□□□□ 0.45
Pcdhga9-201ENSMUST00000091935 Ppp4r2Q0VGB7 417 aa17.89■□□□□ 0.45
Pcdhga9-201ENSMUST00000091935 Eif5bQ05D44 1216 aaKnown RBP17.88■□□□□ 0.45
Pcdhga9-201ENSMUST00000091935 Znf710Q3U288 666 aa17.84■□□□□ 0.45
Pcdhga9-201ENSMUST00000091935 NclP09405 707 aaKnown RBP17.77■□□□□ 0.43
Pcdhga9-201ENSMUST00000091935 Npm1Q61937 292 aaKnown RBP17.76■□□□□ 0.43
Pcdhga9-201ENSMUST00000091935 Crybg2B7ZCC2 1516 aa17.74■□□□□ 0.43
Pcdhga9-201ENSMUST00000091935 Pak3Q61036 559 aa17.69■□□□□ 0.42
Pcdhga9-201ENSMUST00000091935 Wdr43Q6ZQL4 677 aaKnown RBP17.69■□□□□ 0.42
Pcdhga9-201ENSMUST00000091935 Plcd4Q8K3R3 807 aa17.68■□□□□ 0.42
Pcdhga9-201ENSMUST00000091935 Golga3P55937 1487 aa17.67■□□□□ 0.42
Pcdhga9-201ENSMUST00000091935 P3h3Q8CG70 732 aa17.64■□□□□ 0.41
Pcdhga9-201ENSMUST00000091935 Upf2A2AT37 1269 aaKnown RBP17.64■□□□□ 0.41
Pcdhga9-201ENSMUST00000091935 Gtf3c3Q3TMP1 882 aa17.63■□□□□ 0.41
Pcdhga9-201ENSMUST00000091935 Slc4a3P16283 1227 aa17.6■□□□□ 0.41
Pcdhga9-201ENSMUST00000091935 Clip1Q922J3 1391 aa17.58■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 Rpap1Q80TE0 1409 aa17.57■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 Fam50aQ9WV03 339 aaKnown RBP17.57■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 4933416C03RikQ3V063 378 aa17.56■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 Smarca2Q6DIC0 1577 aa17.56■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 Ccdc27Q3V036 639 aa17.55■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 Sycp2Q9CUU3 1500 aa17.53■□□□□ 0.4
Pcdhga9-201ENSMUST00000091935 ScribQ80U72 1612 aa17.52■□□□□ 0.39
Pcdhga9-201ENSMUST00000091935 Pknox2Q8BG99 474 aa17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms