RNA–Protein interactions for RNA: ENSMUST00000090806.4

Rai1-202, Transcript of Retinoic acid-induced protein 1, mousemouse

TSL 1 (best) BASIC

Gene Rai1, Length 7,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-202ENSMUST00000090806 Rhox8Q6VSS7 320 aa22.55■■□□□ 1.2
Rai1-202ENSMUST00000090806 Rpgrip1Q9EPQ2 1331 aa21.4■■□□□ 1.02
Rai1-202ENSMUST00000090806 Cngb1E1AZ71 1325 aa21.03■□□□□ 0.96
Rai1-202ENSMUST00000090806 Las1lA2BE28 776 aaKnown RBP20.93■□□□□ 0.94
Rai1-202ENSMUST00000090806 Pelp1Q9DBD5 1123 aaKnown RBP20.67■□□□□ 0.9
Rai1-202ENSMUST00000090806 Ehmt2Q9Z148 1263 aaKnown RBP20.61■□□□□ 0.89
Rai1-202ENSMUST00000090806 Wdr66E9Q743 1299 aa20.41■□□□□ 0.86
Rai1-202ENSMUST00000090806 Zeb1Q64318 1117 aa20.08■□□□□ 0.8
Rai1-202ENSMUST00000090806 Ube2uB1AUC4 352 aa20.05■□□□□ 0.8
Rai1-202ENSMUST00000090806 Amer1Q7TS75 1132 aa19.97■□□□□ 0.79
Rai1-202ENSMUST00000090806 Esf1Q3V1V3 845 aaKnown RBP19.86■□□□□ 0.77
Rai1-202ENSMUST00000090806 CenpbP27790 599 aa19.82■□□□□ 0.76
Rai1-202ENSMUST00000090806 Ccdc136Q3TVA9 1136 aa19.81■□□□□ 0.76
Rai1-202ENSMUST00000090806 Gab3Q8BSM5 595 aa19.65■□□□□ 0.74
Rai1-202ENSMUST00000090806 Npm2Q80W85 207 aa19.6■□□□□ 0.73
Rai1-202ENSMUST00000090806 Stra8P70278 393 aa19.51■□□□□ 0.71
Rai1-202ENSMUST00000090806 Trim41Q5NCC3 630 aa19.47■□□□□ 0.71
Rai1-202ENSMUST00000090806 Myt1lP97500 1187 aa19.42■□□□□ 0.7
Rai1-202ENSMUST00000090806 Acin1Q9JIX8 1338 aaKnown RBP19.38■□□□□ 0.69
Rai1-202ENSMUST00000090806 4930567H17RikQ3V0K5 233 aa19.38■□□□□ 0.69
Rai1-202ENSMUST00000090806 NefmP08553 848 aa19.36■□□□□ 0.69
Rai1-202ENSMUST00000090806 Slc24a1Q91WD8 1130 aa19.24■□□□□ 0.67
Rai1-202ENSMUST00000090806 Myt1Q8CFC2 1127 aa19.19■□□□□ 0.66
Rai1-202ENSMUST00000090806 UbtfP25976 765 aaKnown RBP19.14■□□□□ 0.65
Rai1-202ENSMUST00000090806 Ttbk1Q6PCN3 1308 aa19.14■□□□□ 0.65
Rai1-202ENSMUST00000090806 4933416C03RikQ3V063 378 aa19.08■□□□□ 0.65
Rai1-202ENSMUST00000090806 Cdk11bP24788 784 aaKnown RBP19.03■□□□□ 0.64
Rai1-202ENSMUST00000090806 Tnnt3Q9QZ47 272 aa18.93■□□□□ 0.62
Rai1-202ENSMUST00000090806 Ccdc180J3QNE4 1664 aa18.91■□□□□ 0.62
Rai1-202ENSMUST00000090806 NeflP08551 543 aa18.85■□□□□ 0.61
Rai1-202ENSMUST00000090806 NrdcQ8BHG1 1161 aa18.84■□□□□ 0.61
Rai1-202ENSMUST00000090806 Anp32bQ9EST5 272 aaKnown RBP18.81■□□□□ 0.6
Rai1-202ENSMUST00000090806 Pcgf6Q99NA9 353 aa18.77■□□□□ 0.6
Rai1-202ENSMUST00000090806 Rtl1Q7M732 1744 aa18.77■□□□□ 0.6
Rai1-202ENSMUST00000090806 Nop58Q6DFW4 536 aaKnown RBP18.73■□□□□ 0.59
Rai1-202ENSMUST00000090806 HrcG5E8J6 738 aa18.71■□□□□ 0.59
Rai1-202ENSMUST00000090806 NischQ80TM9 1593 aa18.71■□□□□ 0.59
Rai1-202ENSMUST00000090806 Eif5bQ05D44 1216 aaKnown RBP18.68■□□□□ 0.58
Rai1-202ENSMUST00000090806 Rtl5Q5DTT4 599 aa18.68■□□□□ 0.58
Rai1-202ENSMUST00000090806 NclP09405 707 aaKnown RBP18.62■□□□□ 0.57
Rai1-202ENSMUST00000090806 Neurod1Q60867 357 aa18.55■□□□□ 0.56
Rai1-202ENSMUST00000090806 Fam50aQ9WV03 339 aaKnown RBP18.51■□□□□ 0.55
Rai1-202ENSMUST00000090806 Os9Q8K2C7 672 aa18.47■□□□□ 0.55
Rai1-202ENSMUST00000090806 Il27Q8K3I6 234 aa18.41■□□□□ 0.54
Rai1-202ENSMUST00000090806 TonslQ6NZL6 1363 aa18.39■□□□□ 0.53
Rai1-202ENSMUST00000090806 Ap3b1Q9Z1T1 1105 aa18.38■□□□□ 0.53
Rai1-202ENSMUST00000090806 Ppargc1bQ8VHJ7 1014 aa18.37■□□□□ 0.53
Rai1-202ENSMUST00000090806 Supt5hO55201 1082 aaKnown RBP18.36■□□□□ 0.53
Rai1-202ENSMUST00000090806 DiexfQ8BTT6 772 aaKnown RBP18.3■□□□□ 0.52
Rai1-202ENSMUST00000090806 DaxxO35613 739 aa18.22■□□□□ 0.51
Rai1-202ENSMUST00000090806 Anp32aO35381 247 aa18.21■□□□□ 0.51
Rai1-202ENSMUST00000090806 Mier1Q5UAK0 511 aa18.06■□□□□ 0.48
Rai1-202ENSMUST00000090806 ClspnQ80YR7 1315 aa18.03■□□□□ 0.48
Rai1-202ENSMUST00000090806 Zcchc6Q5BLK4 1491 aaKnown RBP17.92■□□□□ 0.46
Rai1-202ENSMUST00000090806 Nlrp6Q91WS2 869 aa17.89■□□□□ 0.45
Rai1-202ENSMUST00000090806 Zbtb7cQ8VCZ7 619 aa17.84■□□□□ 0.45
Rai1-202ENSMUST00000090806 CatipB9EKE5 520 aa17.82■□□□□ 0.44
Rai1-202ENSMUST00000090806 Polr3glQ8R0C0 218 aa17.81■□□□□ 0.44
Rai1-202ENSMUST00000090806 ArxO35085 564 aa17.79■□□□□ 0.44
Rai1-202ENSMUST00000090806 Chic1Q8CBW7 227 aa17.78■□□□□ 0.44
Rai1-202ENSMUST00000090806 Hnrnpul2Q00PI9 745 aaKnown RBP17.78■□□□□ 0.44
Rai1-202ENSMUST00000090806 Upf2A2AT37 1269 aaKnown RBP17.74■□□□□ 0.43
Rai1-202ENSMUST00000090806 Lmod2Q3UHZ5 550 aa17.72■□□□□ 0.43
Rai1-202ENSMUST00000090806 Gm13697A2AK42 830 aa17.72■□□□□ 0.43
Rai1-202ENSMUST00000090806 Anks4bQ8K3X6 423 aa17.7■□□□□ 0.42
Rai1-202ENSMUST00000090806 Plekhg3Q4VAC9 1341 aa17.7■□□□□ 0.42
Rai1-202ENSMUST00000090806 Zbtb4Q5F293 982 aa17.7■□□□□ 0.42
Rai1-202ENSMUST00000090806 Gm38655A0A286YDK6 273 aa17.69■□□□□ 0.42
Rai1-202ENSMUST00000090806 Csrnp3P59055 597 aa17.67■□□□□ 0.42
Rai1-202ENSMUST00000090806 Hdac5Q9Z2V6 1113 aa17.66■□□□□ 0.42
Rai1-202ENSMUST00000090806 Aplp2Q06335 707 aa17.65■□□□□ 0.42
Rai1-202ENSMUST00000090806 Ythdc1E9Q5K9 736 aaKnown RBP17.65■□□□□ 0.42
Rai1-202ENSMUST00000090806 Atp1b4Q99ME6 356 aa17.65■□□□□ 0.42
Rai1-202ENSMUST00000090806 Mapk8ip2Q9ERE9 830 aa17.64■□□□□ 0.41
Rai1-202ENSMUST00000090806 Erich6D3Z6S9 713 aa17.63■□□□□ 0.41
Rai1-202ENSMUST00000090806 Ppp4r2Q0VGB7 417 aa17.6■□□□□ 0.41
Rai1-202ENSMUST00000090806 Calr4Q3TQS0 420 aa17.6■□□□□ 0.41
Rai1-202ENSMUST00000090806 Prdm10Q3UTQ7 1184 aa17.59■□□□□ 0.41
Rai1-202ENSMUST00000090806 Hsp90aa1P07901 733 aaKnown RBP17.56■□□□□ 0.4
Rai1-202ENSMUST00000090806 Lmod3E9QA62 571 aa17.55■□□□□ 0.4
Rai1-202ENSMUST00000090806 Ccdc9Q8VC31 543 aaKnown RBP17.55■□□□□ 0.4
Rai1-202ENSMUST00000090806 Npm1Q61937 292 aaKnown RBP17.54■□□□□ 0.4
Rai1-202ENSMUST00000090806 Sall2Q9QX96 1004 aa17.49■□□□□ 0.39
Rai1-202ENSMUST00000090806 DekQ7TNV0 380 aaKnown RBP17.45■□□□□ 0.38
Rai1-202ENSMUST00000090806 Gm35339A0A140LHH9 1649 aa17.45■□□□□ 0.38
Rai1-202ENSMUST00000090806 Eid3Q3V124 375 aa17.45■□□□□ 0.38
Rai1-202ENSMUST00000090806 Gm13695A2AK44 830 aa17.45■□□□□ 0.38
Rai1-202ENSMUST00000090806 Wdr43Q6ZQL4 677 aaKnown RBP17.44■□□□□ 0.38
Rai1-202ENSMUST00000090806 Trim44Q9QXA7 346 aa17.43■□□□□ 0.38
Rai1-202ENSMUST00000090806 Abcc9P70170 1546 aa17.42■□□□□ 0.38
Rai1-202ENSMUST00000090806 Ifnlr1Q8CGK5 535 aa17.41■□□□□ 0.38
Rai1-202ENSMUST00000090806 Ccer2J3QPU5 274 aa17.41■□□□□ 0.38
Rai1-202ENSMUST00000090806 Rangap1P46061 589 aaKnown RBP17.39■□□□□ 0.37
Rai1-202ENSMUST00000090806 Rad21Q61550 635 aaKnown RBP17.35■□□□□ 0.37
Rai1-202ENSMUST00000090806 Vsig10D3YX43 558 aa17.34■□□□□ 0.37
Rai1-202ENSMUST00000090806 Clip1Q922J3 1391 aa17.33■□□□□ 0.36
Rai1-202ENSMUST00000090806 Dcaf1Q80TR8 1506 aa17.3■□□□□ 0.36
Rai1-202ENSMUST00000090806 Fgd1P52734 960 aa17.26■□□□□ 0.35
Rai1-202ENSMUST00000090806 Hsp90ab1P11499 724 aaKnown RBP17.25■□□□□ 0.35
Rai1-202ENSMUST00000090806 Mrs2Q5NCE8 434 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 86.9 ms