RNA–Protein interactions for RNA: ENSMUST00000085677.8

Stra6-202, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-202ENSMUST00000085677 NischQ80TM9 1593 aa21.79■■□□□ 1.08
Stra6-202ENSMUST00000085677 Gm35339A0A140LHH9 1649 aa21.29■■□□□ 1
Stra6-202ENSMUST00000085677 Abcc9P70170 1546 aa21.05■□□□□ 0.96
Stra6-202ENSMUST00000085677 Abcc8B2RUS7 1588 aa20.73■□□□□ 0.91
Stra6-202ENSMUST00000085677 Rtl1Q7M732 1744 aa20.33■□□□□ 0.84
Stra6-202ENSMUST00000085677 Rhox8Q6VSS7 320 aa20.28■□□□□ 0.84
Stra6-202ENSMUST00000085677 Ccdc180J3QNE4 1664 aa20.05■□□□□ 0.8
Stra6-202ENSMUST00000085677 Rpgrip1Q9EPQ2 1331 aa19.75■□□□□ 0.75
Stra6-202ENSMUST00000085677 Zcchc6Q5BLK4 1491 aaKnown RBP19.53■□□□□ 0.72
Stra6-202ENSMUST00000085677 ScribQ80U72 1612 aa19.47■□□□□ 0.71
Stra6-202ENSMUST00000085677 Acin1Q9JIX8 1338 aaKnown RBP19.33■□□□□ 0.69
Stra6-202ENSMUST00000085677 Ehmt2Q9Z148 1263 aaKnown RBP19.1■□□□□ 0.65
Stra6-202ENSMUST00000085677 Dcaf1Q80TR8 1506 aa19.09■□□□□ 0.65
Stra6-202ENSMUST00000085677 Kdm5dQ62240 1548 aa19.08■□□□□ 0.64
Stra6-202ENSMUST00000085677 Rb1cc1Q9ESK9 1588 aa19.06■□□□□ 0.64
Stra6-202ENSMUST00000085677 HrcG5E8J6 738 aa18.95■□□□□ 0.62
Stra6-202ENSMUST00000085677 Ccdc136Q3TVA9 1136 aa18.9■□□□□ 0.62
Stra6-202ENSMUST00000085677 NacadQ5SWP3 1504 aa18.9■□□□□ 0.62
Stra6-202ENSMUST00000085677 Pcgf6Q99NA9 353 aa18.82■□□□□ 0.6
Stra6-202ENSMUST00000085677 Baz1aO88379 1555 aa18.77■□□□□ 0.6
Stra6-202ENSMUST00000085677 Sycp2Q9CUU3 1500 aa18.51■□□□□ 0.55
Stra6-202ENSMUST00000085677 Trim41Q5NCC3 630 aa18.51■□□□□ 0.55
Stra6-202ENSMUST00000085677 Supt5hO55201 1082 aaKnown RBP18.41■□□□□ 0.54
Stra6-202ENSMUST00000085677 Crybg2B7ZCC2 1516 aa18.35■□□□□ 0.53
Stra6-202ENSMUST00000085677 Cep164Q5DU05 1446 aa18.34■□□□□ 0.53
Stra6-202ENSMUST00000085677 Smarca2Q6DIC0 1577 aa18.31■□□□□ 0.52
Stra6-202ENSMUST00000085677 BicraF8VPZ9 1578 aa18.18■□□□□ 0.5
Stra6-202ENSMUST00000085677 Cecr2E9Q2Z1 1453 aa18.16■□□□□ 0.5
Stra6-202ENSMUST00000085677 Neurod1Q60867 357 aa18.13■□□□□ 0.49
Stra6-202ENSMUST00000085677 Cngb1E1AZ71 1325 aa18.04■□□□□ 0.48
Stra6-202ENSMUST00000085677 Zeb1Q64318 1117 aa18■□□□□ 0.47
Stra6-202ENSMUST00000085677 Rsf1E9PWW9 1441 aaKnown RBP17.98■□□□□ 0.47
Stra6-202ENSMUST00000085677 Chic1Q8CBW7 227 aa17.94■□□□□ 0.46
Stra6-202ENSMUST00000085677 Brd4Q9ESU6 1400 aaKnown RBP17.93■□□□□ 0.46
Stra6-202ENSMUST00000085677 Gab3Q8BSM5 595 aa17.92■□□□□ 0.46
Stra6-202ENSMUST00000085677 Esf1Q3V1V3 845 aaKnown RBP17.9■□□□□ 0.46
Stra6-202ENSMUST00000085677 NefmP08553 848 aa17.88■□□□□ 0.45
Stra6-202ENSMUST00000085677 Mier1Q5UAK0 511 aa17.86■□□□□ 0.45
Stra6-202ENSMUST00000085677 Synj1Q8CHC4 1574 aa17.86■□□□□ 0.45
Stra6-202ENSMUST00000085677 Sall2Q9QX96 1004 aa17.81■□□□□ 0.44
Stra6-202ENSMUST00000085677 Ccdc88bQ4QRL3 1481 aa17.8■□□□□ 0.44
Stra6-202ENSMUST00000085677 CftrP26361 1476 aa17.76■□□□□ 0.43
Stra6-202ENSMUST00000085677 Las1lA2BE28 776 aaKnown RBP17.75■□□□□ 0.43
Stra6-202ENSMUST00000085677 Golga3P55937 1487 aa17.69■□□□□ 0.42
Stra6-202ENSMUST00000085677 Smarca4Q3TKT4 1613 aaKnown RBP17.65■□□□□ 0.42
Stra6-202ENSMUST00000085677 Anks4bQ8K3X6 423 aa17.6■□□□□ 0.41
Stra6-202ENSMUST00000085677 1700123L14RikQ3V2K7 440 aa17.57■□□□□ 0.4
Stra6-202ENSMUST00000085677 Cttnbp2B9EJA2 1648 aa17.56■□□□□ 0.4
Stra6-202ENSMUST00000085677 Csrnp3P59055 597 aa17.54■□□□□ 0.4
Stra6-202ENSMUST00000085677 Aebp2Q9Z248 504 aaKnown RBP17.48■□□□□ 0.39
Stra6-202ENSMUST00000085677 Iqgap2Q3UQ44 1575 aa17.47■□□□□ 0.39
Stra6-202ENSMUST00000085677 Wdr66E9Q743 1299 aa17.47■□□□□ 0.39
Stra6-202ENSMUST00000085677 Top2bQ64511 1612 aa17.46■□□□□ 0.39
Stra6-202ENSMUST00000085677 Atad2bE9Q166 1460 aaKnown RBP17.44■□□□□ 0.38
Stra6-202ENSMUST00000085677 UbtfP25976 765 aaKnown RBP17.43■□□□□ 0.38
Stra6-202ENSMUST00000085677 Pds5bQ4VA53 1446 aaKnown RBP17.39■□□□□ 0.37
Stra6-202ENSMUST00000085677 Cc2d2aQ8CFW7 1633 aa17.38■□□□□ 0.37
Stra6-202ENSMUST00000085677 ClspnQ80YR7 1315 aa17.35■□□□□ 0.37
Stra6-202ENSMUST00000085677 Cdk11bP24788 784 aaKnown RBP17.34■□□□□ 0.37
Stra6-202ENSMUST00000085677 Nop58Q6DFW4 536 aaKnown RBP17.33■□□□□ 0.36
Stra6-202ENSMUST00000085677 Rapgef2Q8CHG7 1496 aa17.31■□□□□ 0.36
Stra6-202ENSMUST00000085677 Ppargc1bQ8VHJ7 1014 aa17.29■□□□□ 0.36
Stra6-202ENSMUST00000085677 Aplp2Q06335 707 aa17.25■□□□□ 0.35
Stra6-202ENSMUST00000085677 Frmpd1A2AKB4 1549 aa17.22■□□□□ 0.35
Stra6-202ENSMUST00000085677 Fmn1Q05860 1466 aa17.22■□□□□ 0.35
Stra6-202ENSMUST00000085677 Il27Q8K3I6 234 aa17.2■□□□□ 0.34
Stra6-202ENSMUST00000085677 Myt1lP97500 1187 aa17.19■□□□□ 0.34
Stra6-202ENSMUST00000085677 TonslQ6NZL6 1363 aa17.17■□□□□ 0.34
Stra6-202ENSMUST00000085677 Top2aQ01320 1528 aaKnown RBP17.17■□□□□ 0.34
Stra6-202ENSMUST00000085677 Cep162Q6ZQ06 1403 aa17.16■□□□□ 0.34
Stra6-202ENSMUST00000085677 Npm2Q80W85 207 aa17.13■□□□□ 0.33
Stra6-202ENSMUST00000085677 Wdr62Q3U3T8 1523 aa17.13■□□□□ 0.33
Stra6-202ENSMUST00000085677 CenpbP27790 599 aa17.11■□□□□ 0.33
Stra6-202ENSMUST00000085677 Gm38655A0A286YDK6 273 aa17.1■□□□□ 0.33
Stra6-202ENSMUST00000085677 Ercc6F8VPZ5 1481 aa17.1■□□□□ 0.33
Stra6-202ENSMUST00000085677 Kif15Q6P9L6 1387 aa17.06■□□□□ 0.32
Stra6-202ENSMUST00000085677 Myt1Q8CFC2 1127 aa17.04■□□□□ 0.32
Stra6-202ENSMUST00000085677 Ncapd3Q6ZQK0 1506 aa17.03■□□□□ 0.32
Stra6-202ENSMUST00000085677 Plekhg3Q4VAC9 1341 aa17.01■□□□□ 0.31
Stra6-202ENSMUST00000085677 Eif4g1Q6NZJ6 1600 aaKnown RBP16.99■□□□□ 0.31
Stra6-202ENSMUST00000085677 Clip1Q922J3 1391 aa16.99■□□□□ 0.31
Stra6-202ENSMUST00000085677 Ubl4bQ9CQ84 188 aa16.96■□□□□ 0.31
Stra6-202ENSMUST00000085677 Unc13aQ4KUS2 1712 aa16.93■□□□□ 0.3
Stra6-202ENSMUST00000085677 TnnQ80Z71 1560 aa16.92■□□□□ 0.3
Stra6-202ENSMUST00000085677 PtprkP35822 1457 aa16.9■□□□□ 0.3
Stra6-202ENSMUST00000085677 Lamc3Q9R0B6 1581 aa16.89■□□□□ 0.29
Stra6-202ENSMUST00000085677 Phldb1Q6PDH0 1371 aaKnown RBP16.87■□□□□ 0.29
Stra6-202ENSMUST00000085677 Kdm5bQ80Y84 1544 aa16.83■□□□□ 0.28
Stra6-202ENSMUST00000085677 Thoc2B1AZI6 1594 aaKnown RBP16.83■□□□□ 0.28
Stra6-202ENSMUST00000085677 Hnrnpul2Q00PI9 745 aaKnown RBP16.83■□□□□ 0.28
Stra6-202ENSMUST00000085677 Eid3Q3V124 375 aa16.81■□□□□ 0.28
Stra6-202ENSMUST00000085677 Npm1Q61937 292 aaKnown RBP16.8■□□□□ 0.28
Stra6-202ENSMUST00000085677 Dnajc5bQ9CQ94 199 aa16.8■□□□□ 0.28
Stra6-202ENSMUST00000085677 Cux2P70298 1426 aa16.8■□□□□ 0.28
Stra6-202ENSMUST00000085677 Ap3b1Q9Z1T1 1105 aa16.79■□□□□ 0.28
Stra6-202ENSMUST00000085677 SafbD3YXK2 937 aaKnown RBP16.78■□□□□ 0.28
Stra6-202ENSMUST00000085677 Arap1Q4LDD4 1452 aa16.78■□□□□ 0.28
Stra6-202ENSMUST00000085677 Camsap1A2AHC3 1581 aa16.78■□□□□ 0.28
Stra6-202ENSMUST00000085677 Arhgap35Q91YM2 1499 aa16.76■□□□□ 0.27
Stra6-202ENSMUST00000085677 Ccdc18Q640L5 1455 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms