RNA–Protein interactions for RNA: ENSMUST00000077548.11

Cttnbp2nl-201, Transcript of CTTNBP2 N-terminal-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cttnbp2nl, Length 4,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nl-201ENSMUST00000077548 Rhox8Q6VSS7 320 aa19.81■□□□□ 0.76
Cttnbp2nl-201ENSMUST00000077548 Rpgrip1Q9EPQ2 1331 aa19.15■□□□□ 0.66
Cttnbp2nl-201ENSMUST00000077548 Las1lA2BE28 776 aaKnown RBP18.55■□□□□ 0.56
Cttnbp2nl-201ENSMUST00000077548 Cngb1E1AZ71 1325 aa18.45■□□□□ 0.54
Cttnbp2nl-201ENSMUST00000077548 Ehmt2Q9Z148 1263 aaKnown RBP18.26■□□□□ 0.51
Cttnbp2nl-201ENSMUST00000077548 Pelp1Q9DBD5 1123 aaKnown RBP18.01■□□□□ 0.47
Cttnbp2nl-201ENSMUST00000077548 Wdr66E9Q743 1299 aa17.91■□□□□ 0.46
Cttnbp2nl-201ENSMUST00000077548 Zeb1Q64318 1117 aa17.75■□□□□ 0.43
Cttnbp2nl-201ENSMUST00000077548 CenpbP27790 599 aa17.62■□□□□ 0.41
Cttnbp2nl-201ENSMUST00000077548 Acin1Q9JIX8 1338 aaKnown RBP17.51■□□□□ 0.39
Cttnbp2nl-201ENSMUST00000077548 Ccdc136Q3TVA9 1136 aa17.47■□□□□ 0.39
Cttnbp2nl-201ENSMUST00000077548 Amer1Q7TS75 1132 aa17.39■□□□□ 0.38
Cttnbp2nl-201ENSMUST00000077548 Gab3Q8BSM5 595 aa17.3■□□□□ 0.36
Cttnbp2nl-201ENSMUST00000077548 Ube2uB1AUC4 352 aa17.28■□□□□ 0.36
Cttnbp2nl-201ENSMUST00000077548 Myt1Q8CFC2 1127 aa17.25■□□□□ 0.35
Cttnbp2nl-201ENSMUST00000077548 NefmP08553 848 aa17.24■□□□□ 0.35
Cttnbp2nl-201ENSMUST00000077548 Esf1Q3V1V3 845 aaKnown RBP17.22■□□□□ 0.35
Cttnbp2nl-201ENSMUST00000077548 Trim41Q5NCC3 630 aa17.22■□□□□ 0.35
Cttnbp2nl-201ENSMUST00000077548 Stra8P70278 393 aa17.13■□□□□ 0.33
Cttnbp2nl-201ENSMUST00000077548 Pcgf6Q99NA9 353 aa17.06■□□□□ 0.32
Cttnbp2nl-201ENSMUST00000077548 Npm2Q80W85 207 aa17.02■□□□□ 0.32
Cttnbp2nl-201ENSMUST00000077548 Cdk11bP24788 784 aaKnown RBP16.98■□□□□ 0.31
Cttnbp2nl-201ENSMUST00000077548 Myt1lP97500 1187 aa16.95■□□□□ 0.3
Cttnbp2nl-201ENSMUST00000077548 UbtfP25976 765 aaKnown RBP16.86■□□□□ 0.29
Cttnbp2nl-201ENSMUST00000077548 Ttbk1Q6PCN3 1308 aa16.82■□□□□ 0.28
Cttnbp2nl-201ENSMUST00000077548 Slc24a1Q91WD8 1130 aa16.81■□□□□ 0.28
Cttnbp2nl-201ENSMUST00000077548 Tnnt3Q9QZ47 272 aa16.79■□□□□ 0.28
Cttnbp2nl-201ENSMUST00000077548 4930567H17RikQ3V0K5 233 aa16.76■□□□□ 0.27
Cttnbp2nl-201ENSMUST00000077548 Nop58Q6DFW4 536 aaKnown RBP16.74■□□□□ 0.27
Cttnbp2nl-201ENSMUST00000077548 HrcG5E8J6 738 aa16.71■□□□□ 0.27
Cttnbp2nl-201ENSMUST00000077548 4933416C03RikQ3V063 378 aa16.71■□□□□ 0.27
Cttnbp2nl-201ENSMUST00000077548 Ccdc180J3QNE4 1664 aa16.7■□□□□ 0.26
Cttnbp2nl-201ENSMUST00000077548 NischQ80TM9 1593 aa16.65■□□□□ 0.26
Cttnbp2nl-201ENSMUST00000077548 Supt5hO55201 1082 aaKnown RBP16.62■□□□□ 0.25
Cttnbp2nl-201ENSMUST00000077548 Rtl5Q5DTT4 599 aa16.58■□□□□ 0.24
Cttnbp2nl-201ENSMUST00000077548 DiexfQ8BTT6 772 aaKnown RBP16.54■□□□□ 0.24
Cttnbp2nl-201ENSMUST00000077548 NrdcQ8BHG1 1161 aa16.49■□□□□ 0.23
Cttnbp2nl-201ENSMUST00000077548 NeflP08551 543 aa16.43■□□□□ 0.22
Cttnbp2nl-201ENSMUST00000077548 Anp32bQ9EST5 272 aaKnown RBP16.38■□□□□ 0.21
Cttnbp2nl-201ENSMUST00000077548 Eif5bQ05D44 1216 aaKnown RBP16.37■□□□□ 0.21
Cttnbp2nl-201ENSMUST00000077548 Rtl1Q7M732 1744 aa16.36■□□□□ 0.21
Cttnbp2nl-201ENSMUST00000077548 Ppargc1bQ8VHJ7 1014 aa16.36■□□□□ 0.21
Cttnbp2nl-201ENSMUST00000077548 NclP09405 707 aaKnown RBP16.36■□□□□ 0.21
Cttnbp2nl-201ENSMUST00000077548 TonslQ6NZL6 1363 aa16.3■□□□□ 0.2
Cttnbp2nl-201ENSMUST00000077548 Anp32aO35381 247 aa16.23■□□□□ 0.19
Cttnbp2nl-201ENSMUST00000077548 Fam50aQ9WV03 339 aaKnown RBP16.22■□□□□ 0.19
Cttnbp2nl-201ENSMUST00000077548 Neurod1Q60867 357 aa16.17■□□□□ 0.18
Cttnbp2nl-201ENSMUST00000077548 Mier1Q5UAK0 511 aa16.16■□□□□ 0.18
Cttnbp2nl-201ENSMUST00000077548 ClspnQ80YR7 1315 aa16.16■□□□□ 0.18
Cttnbp2nl-201ENSMUST00000077548 DaxxO35613 739 aa16.09■□□□□ 0.17
Cttnbp2nl-201ENSMUST00000077548 Anks4bQ8K3X6 423 aa16.07■□□□□ 0.16
Cttnbp2nl-201ENSMUST00000077548 Aplp2Q06335 707 aa16.04■□□□□ 0.16
Cttnbp2nl-201ENSMUST00000077548 Ap3b1Q9Z1T1 1105 aa16.03■□□□□ 0.16
Cttnbp2nl-201ENSMUST00000077548 Il27Q8K3I6 234 aa16.02■□□□□ 0.16
Cttnbp2nl-201ENSMUST00000077548 Csrnp3P59055 597 aa16■□□□□ 0.15
Cttnbp2nl-201ENSMUST00000077548 Gm38655A0A286YDK6 273 aa15.94■□□□□ 0.14
Cttnbp2nl-201ENSMUST00000077548 Sall2Q9QX96 1004 aa15.9■□□□□ 0.14
Cttnbp2nl-201ENSMUST00000077548 Os9Q8K2C7 672 aa15.89■□□□□ 0.13
Cttnbp2nl-201ENSMUST00000077548 Zcchc6Q5BLK4 1491 aaKnown RBP15.8■□□□□ 0.12
Cttnbp2nl-201ENSMUST00000077548 Dcaf1Q80TR8 1506 aa15.72■□□□□ 0.11
Cttnbp2nl-201ENSMUST00000077548 Ccdc9Q8VC31 543 aaKnown RBP15.71■□□□□ 0.11
Cttnbp2nl-201ENSMUST00000077548 Calr4Q3TQS0 420 aa15.7■□□□□ 0.1
Cttnbp2nl-201ENSMUST00000077548 Mapk8ip2Q9ERE9 830 aa15.69■□□□□ 0.1
Cttnbp2nl-201ENSMUST00000077548 Plekhg3Q4VAC9 1341 aa15.68■□□□□ 0.1
Cttnbp2nl-201ENSMUST00000077548 Ppp4r2Q0VGB7 417 aa15.66■□□□□ 0.1
Cttnbp2nl-201ENSMUST00000077548 1700123L14RikQ3V2K7 440 aa15.61■□□□□ 0.09
Cttnbp2nl-201ENSMUST00000077548 Wdr43Q6ZQL4 677 aaKnown RBP15.59■□□□□ 0.09
Cttnbp2nl-201ENSMUST00000077548 Eid3Q3V124 375 aa15.59■□□□□ 0.09
Cttnbp2nl-201ENSMUST00000077548 Hsp90aa1P07901 733 aaKnown RBP15.58■□□□□ 0.09
Cttnbp2nl-201ENSMUST00000077548 Lmod2Q3UHZ5 550 aa15.58■□□□□ 0.09
Cttnbp2nl-201ENSMUST00000077548 ArxO35085 564 aa15.57■□□□□ 0.08
Cttnbp2nl-201ENSMUST00000077548 Ythdc1E9Q5K9 736 aaKnown RBP15.51■□□□□ 0.07
Cttnbp2nl-201ENSMUST00000077548 Nlrp6Q91WS2 869 aa15.51■□□□□ 0.07
Cttnbp2nl-201ENSMUST00000077548 Upf2A2AT37 1269 aaKnown RBP15.51■□□□□ 0.07
Cttnbp2nl-201ENSMUST00000077548 Fam71e1A1L3C1 212 aa15.46■□□□□ 0.07
Cttnbp2nl-201ENSMUST00000077548 Polr3glQ8R0C0 218 aa15.46■□□□□ 0.07
Cttnbp2nl-201ENSMUST00000077548 Zbtb7cQ8VCZ7 619 aa15.44■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 Ccer2J3QPU5 274 aa15.44■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 Cep164Q5DU05 1446 aa15.44■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 Zbtb4Q5F293 982 aa15.43■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 Abcc9P70170 1546 aa15.42■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 CatipB9EKE5 520 aa15.42■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 Hnrnpul2Q00PI9 745 aaKnown RBP15.4■□□□□ 0.06
Cttnbp2nl-201ENSMUST00000077548 Clip1Q922J3 1391 aa15.39■□□□□ 0.05
Cttnbp2nl-201ENSMUST00000077548 Mrs2Q5NCE8 434 aa15.38■□□□□ 0.05
Cttnbp2nl-201ENSMUST00000077548 Bcl11aQ9QYE3 773 aa15.38■□□□□ 0.05
Cttnbp2nl-201ENSMUST00000077548 Lmod3E9QA62 571 aa15.34■□□□□ 0.05
Cttnbp2nl-201ENSMUST00000077548 Ccdc27Q3V036 639 aa15.34■□□□□ 0.05
Cttnbp2nl-201ENSMUST00000077548 Trim44Q9QXA7 346 aa15.33■□□□□ 0.05
Cttnbp2nl-201ENSMUST00000077548 CanxP35564 591 aaKnown RBP15.32■□□□□ 0.04
Cttnbp2nl-201ENSMUST00000077548 Hdac5Q9Z2V6 1113 aa15.28■□□□□ 0.04
Cttnbp2nl-201ENSMUST00000077548 Prdm10Q3UTQ7 1184 aa15.28■□□□□ 0.04
Cttnbp2nl-201ENSMUST00000077548 DekQ7TNV0 380 aaKnown RBP15.28■□□□□ 0.04
Cttnbp2nl-201ENSMUST00000077548 Chic1Q8CBW7 227 aa15.27■□□□□ 0.04
Cttnbp2nl-201ENSMUST00000077548 Rad21Q61550 635 aaKnown RBP15.27■□□□□ 0.03
Cttnbp2nl-201ENSMUST00000077548 Npm1Q61937 292 aaKnown RBP15.26■□□□□ 0.03
Cttnbp2nl-201ENSMUST00000077548 Erich6D3Z6S9 713 aa15.24■□□□□ 0.03
Cttnbp2nl-201ENSMUST00000077548 Aebp2Q9Z248 504 aaKnown RBP15.22■□□□□ 0.03
Cttnbp2nl-201ENSMUST00000077548 Hsp90ab1P11499 724 aaKnown RBP15.2■□□□□ 0.02
Cttnbp2nl-201ENSMUST00000077548 Irx3P81067 507 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 136 ms