RNA–Protein interactions for RNA: ENSMUST00000072018.5

Alms1-201, Transcript of Alstrom syndrome protein 1 homolog, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Alms1, Length 9,986 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1-201ENSMUST00000072018 Rhox8Q6VSS7 320 aa16.52■□□□□ 0.23
Alms1-201ENSMUST00000072018 Cngb1E1AZ71 1325 aa15.8■□□□□ 0.12
Alms1-201ENSMUST00000072018 Las1lA2BE28 776 aaKnown RBP15.79■□□□□ 0.12
Alms1-201ENSMUST00000072018 Rpgrip1Q9EPQ2 1331 aa15.57■□□□□ 0.08
Alms1-201ENSMUST00000072018 Pelp1Q9DBD5 1123 aaKnown RBP15.56■□□□□ 0.08
Alms1-201ENSMUST00000072018 Amer1Q7TS75 1132 aa15.32■□□□□ 0.04
Alms1-201ENSMUST00000072018 Ube2uB1AUC4 352 aa15.18■□□□□ 0.02
Alms1-201ENSMUST00000072018 Ehmt2Q9Z148 1263 aaKnown RBP14.99□□□□□ -0.01
Alms1-201ENSMUST00000072018 4930567H17RikQ3V0K5 233 aa14.99□□□□□ -0.01
Alms1-201ENSMUST00000072018 Wdr66E9Q743 1299 aa14.92□□□□□ -0.02
Alms1-201ENSMUST00000072018 Myt1Q8CFC2 1127 aa14.87□□□□□ -0.03
Alms1-201ENSMUST00000072018 Zeb1Q64318 1117 aa14.82□□□□□ -0.04
Alms1-201ENSMUST00000072018 CenpbP27790 599 aa14.77□□□□□ -0.04
Alms1-201ENSMUST00000072018 Esf1Q3V1V3 845 aaKnown RBP14.72□□□□□ -0.05
Alms1-201ENSMUST00000072018 Npm2Q80W85 207 aa14.52□□□□□ -0.09
Alms1-201ENSMUST00000072018 DiexfQ8BTT6 772 aaKnown RBP14.43□□□□□ -0.1
Alms1-201ENSMUST00000072018 Ccdc136Q3TVA9 1136 aa14.37□□□□□ -0.11
Alms1-201ENSMUST00000072018 Gab3Q8BSM5 595 aa14.36□□□□□ -0.11
Alms1-201ENSMUST00000072018 Myt1lP97500 1187 aa14.36□□□□□ -0.11
Alms1-201ENSMUST00000072018 Ttbk1Q6PCN3 1308 aa14.33□□□□□ -0.12
Alms1-201ENSMUST00000072018 Slc24a1Q91WD8 1130 aa14.31□□□□□ -0.12
Alms1-201ENSMUST00000072018 4933416C03RikQ3V063 378 aa14.14□□□□□ -0.15
Alms1-201ENSMUST00000072018 Ythdc1E9Q5K9 736 aaKnown RBP14.05□□□□□ -0.16
Alms1-201ENSMUST00000072018 Stra8P70278 393 aa13.99□□□□□ -0.17
Alms1-201ENSMUST00000072018 Os9Q8K2C7 672 aa13.96□□□□□ -0.17
Alms1-201ENSMUST00000072018 Rtl5Q5DTT4 599 aa13.9□□□□□ -0.18
Alms1-201ENSMUST00000072018 Trim41Q5NCC3 630 aa13.86□□□□□ -0.19
Alms1-201ENSMUST00000072018 UbtfP25976 765 aaKnown RBP13.86□□□□□ -0.19
Alms1-201ENSMUST00000072018 NeflP08551 543 aa13.84□□□□□ -0.19
Alms1-201ENSMUST00000072018 Neurod1Q60867 357 aa13.79□□□□□ -0.2
Alms1-201ENSMUST00000072018 Anp32bQ9EST5 272 aaKnown RBP13.78□□□□□ -0.2
Alms1-201ENSMUST00000072018 NrdcQ8BHG1 1161 aa13.74□□□□□ -0.21
Alms1-201ENSMUST00000072018 Il27Q8K3I6 234 aa13.72□□□□□ -0.21
Alms1-201ENSMUST00000072018 HrcG5E8J6 738 aa13.69□□□□□ -0.22
Alms1-201ENSMUST00000072018 Eif5bQ05D44 1216 aaKnown RBP13.68□□□□□ -0.22
Alms1-201ENSMUST00000072018 Gm13697A2AK42 830 aa13.67□□□□□ -0.22
Alms1-201ENSMUST00000072018 Chic1Q8CBW7 227 aa13.63□□□□□ -0.23
Alms1-201ENSMUST00000072018 Tnnt3Q9QZ47 272 aa13.6□□□□□ -0.23
Alms1-201ENSMUST00000072018 Fam50aQ9WV03 339 aaKnown RBP13.6□□□□□ -0.23
Alms1-201ENSMUST00000072018 Acin1Q9JIX8 1338 aaKnown RBP13.55□□□□□ -0.24
Alms1-201ENSMUST00000072018 Ap3b1Q9Z1T1 1105 aa13.54□□□□□ -0.24
Alms1-201ENSMUST00000072018 Cdk11bP24788 784 aaKnown RBP13.52□□□□□ -0.25
Alms1-201ENSMUST00000072018 NclP09405 707 aaKnown RBP13.51□□□□□ -0.25
Alms1-201ENSMUST00000072018 NefmP08553 848 aa13.5□□□□□ -0.25
Alms1-201ENSMUST00000072018 Zbtb7cQ8VCZ7 619 aa13.5□□□□□ -0.25
Alms1-201ENSMUST00000072018 Plppr3Q7TPB0 716 aa13.47□□□□□ -0.25
Alms1-201ENSMUST00000072018 Atp1b4Q99ME6 356 aa13.4□□□□□ -0.26
Alms1-201ENSMUST00000072018 Ifnlr1Q8CGK5 535 aa13.4□□□□□ -0.26
Alms1-201ENSMUST00000072018 Gm13695A2AK44 830 aa13.39□□□□□ -0.27
Alms1-201ENSMUST00000072018 CatipB9EKE5 520 aa13.39□□□□□ -0.27
Alms1-201ENSMUST00000072018 Hnrnpul2Q00PI9 745 aaKnown RBP13.36□□□□□ -0.27
Alms1-201ENSMUST00000072018 DaxxO35613 739 aa13.35□□□□□ -0.27
Alms1-201ENSMUST00000072018 Pcgf6Q99NA9 353 aa13.35□□□□□ -0.27
Alms1-201ENSMUST00000072018 Prdm10Q3UTQ7 1184 aa13.29□□□□□ -0.28
Alms1-201ENSMUST00000072018 Erich6D3Z6S9 713 aa13.29□□□□□ -0.28
Alms1-201ENSMUST00000072018 Polr3glQ8R0C0 218 aa13.28□□□□□ -0.28
Alms1-201ENSMUST00000072018 Zbtb4Q5F293 982 aa13.27□□□□□ -0.29
Alms1-201ENSMUST00000072018 Ppargc1bQ8VHJ7 1014 aa13.26□□□□□ -0.29
Alms1-201ENSMUST00000072018 Nlrp6Q91WS2 869 aa13.25□□□□□ -0.29
Alms1-201ENSMUST00000072018 ArxO35085 564 aa13.22□□□□□ -0.29
Alms1-201ENSMUST00000072018 Ccdc9Q8VC31 543 aaKnown RBP13.21□□□□□ -0.29
Alms1-201ENSMUST00000072018 Nop58Q6DFW4 536 aaKnown RBP13.21□□□□□ -0.29
Alms1-201ENSMUST00000072018 Anp32aO35381 247 aa13.18□□□□□ -0.3
Alms1-201ENSMUST00000072018 Hsp90aa1P07901 733 aaKnown RBP13.13□□□□□ -0.31
Alms1-201ENSMUST00000072018 Rtl1Q7M732 1744 aa13.1□□□□□ -0.31
Alms1-201ENSMUST00000072018 Lmod3E9QA62 571 aa13.09□□□□□ -0.31
Alms1-201ENSMUST00000072018 Znf326O88291 580 aa13.06□□□□□ -0.32
Alms1-201ENSMUST00000072018 Rangap1P46061 589 aaKnown RBP13.06□□□□□ -0.32
Alms1-201ENSMUST00000072018 Ccdc180J3QNE4 1664 aa13.05□□□□□ -0.32
Alms1-201ENSMUST00000072018 TonslQ6NZL6 1363 aa12.99□□□□□ -0.33
Alms1-201ENSMUST00000072018 Safb2Q80YR5 991 aaKnown RBP12.98□□□□□ -0.33
Alms1-201ENSMUST00000072018 Upf2A2AT37 1269 aaKnown RBP12.97□□□□□ -0.33
Alms1-201ENSMUST00000072018 Bcl11aQ9QYE3 773 aa12.97□□□□□ -0.33
Alms1-201ENSMUST00000072018 Gm35339A0A140LHH9 1649 aa12.96□□□□□ -0.33
Alms1-201ENSMUST00000072018 Lmod2Q3UHZ5 550 aa12.94□□□□□ -0.34
Alms1-201ENSMUST00000072018 Hdac5Q9Z2V6 1113 aa12.93□□□□□ -0.34
Alms1-201ENSMUST00000072018 NischQ80TM9 1593 aa12.92□□□□□ -0.34
Alms1-201ENSMUST00000072018 Q8BT18 775 aa12.9□□□□□ -0.34
Alms1-201ENSMUST00000072018 Tnnt2P50752 301 aa12.88□□□□□ -0.35
Alms1-201ENSMUST00000072018 Zcchc6Q5BLK4 1491 aaKnown RBP12.88□□□□□ -0.35
Alms1-201ENSMUST00000072018 Aplp2Q06335 707 aa12.86□□□□□ -0.35
Alms1-201ENSMUST00000072018 Vsig10D3YX43 558 aa12.85□□□□□ -0.35
Alms1-201ENSMUST00000072018 Fkbp15Q6P9Q6 1216 aaKnown RBP12.85□□□□□ -0.35
Alms1-201ENSMUST00000072018 DekQ7TNV0 380 aaKnown RBP12.85□□□□□ -0.35
Alms1-201ENSMUST00000072018 Npm1Q61937 292 aaKnown RBP12.83□□□□□ -0.36
Alms1-201ENSMUST00000072018 Supt5hO55201 1082 aaKnown RBP12.82□□□□□ -0.36
Alms1-201ENSMUST00000072018 P3h3Q8CG70 732 aa12.8□□□□□ -0.36
Alms1-201ENSMUST00000072018 Clstn1Q9EPL2 979 aa12.8□□□□□ -0.36
Alms1-201ENSMUST00000072018 Podxl2Q8CAE9 603 aa12.79□□□□□ -0.36
Alms1-201ENSMUST00000072018 Irx6Q9ER75 438 aa12.79□□□□□ -0.36
Alms1-201ENSMUST00000072018 Csrnp3P59055 597 aa12.77□□□□□ -0.37
Alms1-201ENSMUST00000072018 Trim44Q9QXA7 346 aa12.75□□□□□ -0.37
Alms1-201ENSMUST00000072018 Mapk8ip2Q9ERE9 830 aa12.74□□□□□ -0.37
Alms1-201ENSMUST00000072018 Fgd1P52734 960 aa12.74□□□□□ -0.37
Alms1-201ENSMUST00000072018 Plekhg3Q4VAC9 1341 aa12.71□□□□□ -0.38
Alms1-201ENSMUST00000072018 Rtn4Q99P72 1162 aaKnown RBP12.69□□□□□ -0.38
Alms1-201ENSMUST00000072018 Abcc9P70170 1546 aa12.69□□□□□ -0.38
Alms1-201ENSMUST00000072018 Anks4bQ8K3X6 423 aa12.66□□□□□ -0.38
Alms1-201ENSMUST00000072018 Slc4a1apE9PX68 744 aa12.65□□□□□ -0.38
Alms1-201ENSMUST00000072018 Rad21Q61550 635 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 6.3 ms