RNA–Protein interactions for RNA: ENSMUST00000060642.6

Lrrk2-201, Transcript of Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lrrk2, Length 8,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2-201ENSMUST00000060642 Rhox8Q6VSS7 320 aa17.36■□□□□ 0.37
Lrrk2-201ENSMUST00000060642 NischQ80TM9 1593 aa16.63■□□□□ 0.25
Lrrk2-201ENSMUST00000060642 Rpgrip1Q9EPQ2 1331 aa16.48■□□□□ 0.23
Lrrk2-201ENSMUST00000060642 Rtl1Q7M732 1744 aa15.96■□□□□ 0.14
Lrrk2-201ENSMUST00000060642 Ccdc180J3QNE4 1664 aa15.77■□□□□ 0.11
Lrrk2-201ENSMUST00000060642 Abcc9P70170 1546 aa15.77■□□□□ 0.11
Lrrk2-201ENSMUST00000060642 Trim41Q5NCC3 630 aa15.65■□□□□ 0.1
Lrrk2-201ENSMUST00000060642 Ccdc136Q3TVA9 1136 aa15.5■□□□□ 0.07
Lrrk2-201ENSMUST00000060642 Cngb1E1AZ71 1325 aa15.44■□□□□ 0.06
Lrrk2-201ENSMUST00000060642 Abcc8B2RUS7 1588 aa15.35■□□□□ 0.05
Lrrk2-201ENSMUST00000060642 HrcG5E8J6 738 aa15.35■□□□□ 0.05
Lrrk2-201ENSMUST00000060642 Esf1Q3V1V3 845 aaKnown RBP15.32■□□□□ 0.04
Lrrk2-201ENSMUST00000060642 Gm35339A0A140LHH9 1649 aa15.31■□□□□ 0.04
Lrrk2-201ENSMUST00000060642 Las1lA2BE28 776 aaKnown RBP15.26■□□□□ 0.03
Lrrk2-201ENSMUST00000060642 Acin1Q9JIX8 1338 aaKnown RBP15.21■□□□□ 0.02
Lrrk2-201ENSMUST00000060642 Ehmt2Q9Z148 1263 aaKnown RBP15.12■□□□□ 0.01
Lrrk2-201ENSMUST00000060642 NefmP08553 848 aa15.06■□□□□ 0
Lrrk2-201ENSMUST00000060642 Gab3Q8BSM5 595 aa14.95□□□□□ -0.02
Lrrk2-201ENSMUST00000060642 Npm2Q80W85 207 aa14.94□□□□□ -0.02
Lrrk2-201ENSMUST00000060642 Zcchc6Q5BLK4 1491 aaKnown RBP14.89□□□□□ -0.03
Lrrk2-201ENSMUST00000060642 Wdr66E9Q743 1299 aa14.84□□□□□ -0.03
Lrrk2-201ENSMUST00000060642 Zeb1Q64318 1117 aa14.8□□□□□ -0.04
Lrrk2-201ENSMUST00000060642 Pelp1Q9DBD5 1123 aaKnown RBP14.75□□□□□ -0.05
Lrrk2-201ENSMUST00000060642 Myt1lP97500 1187 aa14.71□□□□□ -0.06
Lrrk2-201ENSMUST00000060642 Stra8P70278 393 aa14.67□□□□□ -0.06
Lrrk2-201ENSMUST00000060642 Rb1cc1Q9ESK9 1588 aa14.63□□□□□ -0.07
Lrrk2-201ENSMUST00000060642 Ube2uB1AUC4 352 aa14.62□□□□□ -0.07
Lrrk2-201ENSMUST00000060642 Brd4Q9ESU6 1400 aaKnown RBP14.59□□□□□ -0.07
Lrrk2-201ENSMUST00000060642 Dcaf1Q80TR8 1506 aa14.56□□□□□ -0.08
Lrrk2-201ENSMUST00000060642 UbtfP25976 765 aaKnown RBP14.51□□□□□ -0.09
Lrrk2-201ENSMUST00000060642 Cep164Q5DU05 1446 aa14.5□□□□□ -0.09
Lrrk2-201ENSMUST00000060642 CenpbP27790 599 aa14.46□□□□□ -0.1
Lrrk2-201ENSMUST00000060642 NacadQ5SWP3 1504 aa14.45□□□□□ -0.1
Lrrk2-201ENSMUST00000060642 Baz1aO88379 1555 aa14.43□□□□□ -0.1
Lrrk2-201ENSMUST00000060642 Pcgf6Q99NA9 353 aa14.4□□□□□ -0.1
Lrrk2-201ENSMUST00000060642 Cdk11bP24788 784 aaKnown RBP14.32□□□□□ -0.12
Lrrk2-201ENSMUST00000060642 Tnnt3Q9QZ47 272 aa14.31□□□□□ -0.12
Lrrk2-201ENSMUST00000060642 Myt1Q8CFC2 1127 aa14.29□□□□□ -0.12
Lrrk2-201ENSMUST00000060642 Il27Q8K3I6 234 aa14.23□□□□□ -0.13
Lrrk2-201ENSMUST00000060642 TonslQ6NZL6 1363 aa14.2□□□□□ -0.14
Lrrk2-201ENSMUST00000060642 Nop58Q6DFW4 536 aaKnown RBP14.15□□□□□ -0.14
Lrrk2-201ENSMUST00000060642 Mier1Q5UAK0 511 aa14.14□□□□□ -0.15
Lrrk2-201ENSMUST00000060642 Anp32bQ9EST5 272 aaKnown RBP14.12□□□□□ -0.15
Lrrk2-201ENSMUST00000060642 Kdm5dQ62240 1548 aa14.1□□□□□ -0.15
Lrrk2-201ENSMUST00000060642 Fam50aQ9WV03 339 aaKnown RBP14.08□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 ClspnQ80YR7 1315 aa14.08□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 Crybg2B7ZCC2 1516 aa14.08□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 NclP09405 707 aaKnown RBP14.07□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 Golga3P55937 1487 aa14.07□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 Supt5hO55201 1082 aaKnown RBP14.04□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 Npm1Q61937 292 aaKnown RBP14.04□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 NrdcQ8BHG1 1161 aa14.02□□□□□ -0.16
Lrrk2-201ENSMUST00000060642 Neurod1Q60867 357 aa14.02□□□□□ -0.17
Lrrk2-201ENSMUST00000060642 Ccer2J3QPU5 274 aa14.01□□□□□ -0.17
Lrrk2-201ENSMUST00000060642 Clip1Q922J3 1391 aa13.98□□□□□ -0.17
Lrrk2-201ENSMUST00000060642 Chic1Q8CBW7 227 aa13.94□□□□□ -0.18
Lrrk2-201ENSMUST00000060642 Ap3b1Q9Z1T1 1105 aa13.92□□□□□ -0.18
Lrrk2-201ENSMUST00000060642 Rtl5Q5DTT4 599 aa13.91□□□□□ -0.18
Lrrk2-201ENSMUST00000060642 NeflP08551 543 aa13.87□□□□□ -0.19
Lrrk2-201ENSMUST00000060642 Hdac5Q9Z2V6 1113 aa13.87□□□□□ -0.19
Lrrk2-201ENSMUST00000060642 Plekhg3Q4VAC9 1341 aa13.84□□□□□ -0.19
Lrrk2-201ENSMUST00000060642 Slc24a1Q91WD8 1130 aa13.83□□□□□ -0.2
Lrrk2-201ENSMUST00000060642 Rsf1E9PWW9 1441 aaKnown RBP13.81□□□□□ -0.2
Lrrk2-201ENSMUST00000060642 Sycp2Q9CUU3 1500 aa13.78□□□□□ -0.2
Lrrk2-201ENSMUST00000060642 Smarca2Q6DIC0 1577 aa13.77□□□□□ -0.21
Lrrk2-201ENSMUST00000060642 Anks4bQ8K3X6 423 aa13.75□□□□□ -0.21
Lrrk2-201ENSMUST00000060642 Ccdc18Q640L5 1455 aa13.74□□□□□ -0.21
Lrrk2-201ENSMUST00000060642 Ercc6F8VPZ5 1481 aa13.72□□□□□ -0.21
Lrrk2-201ENSMUST00000060642 Eea1Q8BL66 1411 aa13.71□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 Fmn1Q05860 1466 aa13.7□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 Setd5Q5XJV7 1441 aa13.69□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 Lmod2Q3UHZ5 550 aa13.67□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 ScribQ80U72 1612 aa13.67□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 Anp32aO35381 247 aa13.65□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 Pds5bQ4VA53 1446 aaKnown RBP13.65□□□□□ -0.22
Lrrk2-201ENSMUST00000060642 Sall2Q9QX96 1004 aa13.63□□□□□ -0.23
Lrrk2-201ENSMUST00000060642 BlmO88700 1416 aa13.63□□□□□ -0.23
Lrrk2-201ENSMUST00000060642 Kif15Q6P9L6 1387 aa13.62□□□□□ -0.23
Lrrk2-201ENSMUST00000060642 Os9Q8K2C7 672 aa13.61□□□□□ -0.23
Lrrk2-201ENSMUST00000060642 Aplp2Q06335 707 aa13.59□□□□□ -0.23
Lrrk2-201ENSMUST00000060642 Ubl4bQ9CQ84 188 aa13.59□□□□□ -0.23
Lrrk2-201ENSMUST00000060642 CftrP26361 1476 aa13.58□□□□□ -0.24
Lrrk2-201ENSMUST00000060642 Mia2Q91ZV0 1396 aa13.55□□□□□ -0.24
Lrrk2-201ENSMUST00000060642 Clstn2Q9ER65 966 aa13.55□□□□□ -0.24
Lrrk2-201ENSMUST00000060642 Cep162Q6ZQ06 1403 aa13.53□□□□□ -0.24
Lrrk2-201ENSMUST00000060642 Upf2A2AT37 1269 aaKnown RBP13.53□□□□□ -0.24
Lrrk2-201ENSMUST00000060642 Eif5bQ05D44 1216 aaKnown RBP13.52□□□□□ -0.24
Lrrk2-201ENSMUST00000060642 Ccdc88bQ4QRL3 1481 aa13.51□□□□□ -0.25
Lrrk2-201ENSMUST00000060642 Cttnbp2B9EJA2 1648 aa13.51□□□□□ -0.25
Lrrk2-201ENSMUST00000060642 Eid3Q3V124 375 aa13.5□□□□□ -0.25
Lrrk2-201ENSMUST00000060642 Ppargc1bQ8VHJ7 1014 aa13.49□□□□□ -0.25
Lrrk2-201ENSMUST00000060642 Amer1Q7TS75 1132 aa13.47□□□□□ -0.25
Lrrk2-201ENSMUST00000060642 Smarca4Q3TKT4 1613 aaKnown RBP13.46□□□□□ -0.25
Lrrk2-201ENSMUST00000060642 Atad2bE9Q166 1460 aaKnown RBP13.42□□□□□ -0.26
Lrrk2-201ENSMUST00000060642 Synj1Q8CHC4 1574 aa13.42□□□□□ -0.26
Lrrk2-201ENSMUST00000060642 Hnrnpul2Q00PI9 745 aaKnown RBP13.39□□□□□ -0.27
Lrrk2-201ENSMUST00000060642 4933416C03RikQ3V063 378 aa13.38□□□□□ -0.27
Lrrk2-201ENSMUST00000060642 Cwc22Q8C5N3 908 aaKnown RBP13.34□□□□□ -0.27
Lrrk2-201ENSMUST00000060642 Cecr2E9Q2Z1 1453 aa13.33□□□□□ -0.28
Lrrk2-201ENSMUST00000060642 Fyco1Q8VDC1 1437 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 118.6 ms