RNA–Protein interactions for RNA: ENSMUST00000060397.12

Rfx4-202, Transcript of Transcription factor RFX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rfx4, Length 3,534 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4-202ENSMUST00000060397 Rpgrip1Q9EPQ2 1331 aa10.59□□□□□ -0.71
Rfx4-202ENSMUST00000060397 NischQ80TM9 1593 aa10.46□□□□□ -0.73
Rfx4-202ENSMUST00000060397 Gm35339A0A140LHH9 1649 aa10.34□□□□□ -0.75
Rfx4-202ENSMUST00000060397 DiexfQ8BTT6 772 aaKnown RBP10.18□□□□□ -0.78
Rfx4-202ENSMUST00000060397 Pcgf6Q99NA9 353 aa10.17□□□□□ -0.78
Rfx4-202ENSMUST00000060397 Abcc9P70170 1546 aa10.17□□□□□ -0.78
Rfx4-202ENSMUST00000060397 Myt1Q8CFC2 1127 aa10.15□□□□□ -0.79
Rfx4-202ENSMUST00000060397 Las1lA2BE28 776 aaKnown RBP10.14□□□□□ -0.79
Rfx4-202ENSMUST00000060397 CenpbP27790 599 aa10.06□□□□□ -0.8
Rfx4-202ENSMUST00000060397 Abcc8B2RUS7 1588 aa10.01□□□□□ -0.81
Rfx4-202ENSMUST00000060397 Amer1Q7TS75 1132 aa9.92□□□□□ -0.82
Rfx4-202ENSMUST00000060397 Acin1Q9JIX8 1338 aaKnown RBP9.87□□□□□ -0.83
Rfx4-202ENSMUST00000060397 Bcl11aQ9QYE3 773 aa9.78□□□□□ -0.84
Rfx4-202ENSMUST00000060397 Neurod1Q60867 357 aa9.69□□□□□ -0.86
Rfx4-202ENSMUST00000060397 Rhox8Q6VSS7 320 aa9.63□□□□□ -0.87
Rfx4-202ENSMUST00000060397 1700123L14RikQ3V2K7 440 aa9.62□□□□□ -0.87
Rfx4-202ENSMUST00000060397 Cngb1E1AZ71 1325 aa9.56□□□□□ -0.88
Rfx4-202ENSMUST00000060397 Ube2uB1AUC4 352 aa9.56□□□□□ -0.88
Rfx4-202ENSMUST00000060397 Supt5hO55201 1082 aaKnown RBP9.53□□□□□ -0.88
Rfx4-202ENSMUST00000060397 PrkcshO08795 521 aa9.5□□□□□ -0.89
Rfx4-202ENSMUST00000060397 Ehmt2Q9Z148 1263 aaKnown RBP9.48□□□□□ -0.89
Rfx4-202ENSMUST00000060397 Csrnp3P59055 597 aa9.44□□□□□ -0.9
Rfx4-202ENSMUST00000060397 ScribQ80U72 1612 aa9.42□□□□□ -0.9
Rfx4-202ENSMUST00000060397 Aplp2Q06335 707 aa9.41□□□□□ -0.9
Rfx4-202ENSMUST00000060397 Anks4bQ8K3X6 423 aa9.36□□□□□ -0.91
Rfx4-202ENSMUST00000060397 Trim41Q5NCC3 630 aa9.32□□□□□ -0.92
Rfx4-202ENSMUST00000060397 Ttbk1Q6PCN3 1308 aa9.29□□□□□ -0.92
Rfx4-202ENSMUST00000060397 Plppr3Q7TPB0 716 aa9.27□□□□□ -0.92
Rfx4-202ENSMUST00000060397 Dcaf1Q80TR8 1506 aa9.24□□□□□ -0.93
Rfx4-202ENSMUST00000060397 Zeb1Q64318 1117 aa9.19□□□□□ -0.94
Rfx4-202ENSMUST00000060397 Kdm5dQ62240 1548 aa9.18□□□□□ -0.94
Rfx4-202ENSMUST00000060397 Rtl1Q7M732 1744 aa9.17□□□□□ -0.94
Rfx4-202ENSMUST00000060397 Pknox2Q8BG99 474 aa9.16□□□□□ -0.94
Rfx4-202ENSMUST00000060397 Gm38655A0A286YDK6 273 aa9.15□□□□□ -0.95
Rfx4-202ENSMUST00000060397 NacadQ5SWP3 1504 aa9.14□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Rb1cc1Q9ESK9 1588 aa9.14□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Ifnlr1Q8CGK5 535 aa9.14□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Pelp1Q9DBD5 1123 aaKnown RBP9.13□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Zcchc6Q5BLK4 1491 aaKnown RBP9.12□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Ccdc180J3QNE4 1664 aa9.11□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Fam71e1A1L3C1 212 aa9.09□□□□□ -0.95
Rfx4-202ENSMUST00000060397 Cdk11bP24788 784 aaKnown RBP9.09□□□□□ -0.95
Rfx4-202ENSMUST00000060397 CatipB9EKE5 520 aa9.07□□□□□ -0.96
Rfx4-202ENSMUST00000060397 Rtl5Q5DTT4 599 aa9.06□□□□□ -0.96
Rfx4-202ENSMUST00000060397 NrdcQ8BHG1 1161 aa9.04□□□□□ -0.96
Rfx4-202ENSMUST00000060397 Baz1aO88379 1555 aa9.03□□□□□ -0.96
Rfx4-202ENSMUST00000060397 Hdac5Q9Z2V6 1113 aa9.01□□□□□ -0.97
Rfx4-202ENSMUST00000060397 Dnajc5P60904 198 aa9□□□□□ -0.97
Rfx4-202ENSMUST00000060397 Sall2Q9QX96 1004 aa9□□□□□ -0.97
Rfx4-202ENSMUST00000060397 Nop58Q6DFW4 536 aaKnown RBP8.99□□□□□ -0.97
Rfx4-202ENSMUST00000060397 Fgd1P52734 960 aa8.98□□□□□ -0.97
Rfx4-202ENSMUST00000060397 Dnajc5bQ9CQ94 199 aa8.98□□□□□ -0.97
Rfx4-202ENSMUST00000060397 Sycp2Q9CUU3 1500 aa8.95□□□□□ -0.98
Rfx4-202ENSMUST00000060397 Wdr66E9Q743 1299 aa8.93□□□□□ -0.98
Rfx4-202ENSMUST00000060397 NefmP08553 848 aa8.92□□□□□ -0.98
Rfx4-202ENSMUST00000060397 Ccdc136Q3TVA9 1136 aa8.92□□□□□ -0.98
Rfx4-202ENSMUST00000060397 Gtf3c5Q8R2T8 520 aa8.88□□□□□ -0.99
Rfx4-202ENSMUST00000060397 Crybg2B7ZCC2 1516 aa8.87□□□□□ -0.99
Rfx4-202ENSMUST00000060397 ArxO35085 564 aa8.87□□□□□ -0.99
Rfx4-202ENSMUST00000060397 Mapk8ip2Q9ERE9 830 aa8.87□□□□□ -0.99
Rfx4-202ENSMUST00000060397 BccipQ9CWI3 316 aa8.86□□□□□ -0.99
Rfx4-202ENSMUST00000060397 Smarca2Q6DIC0 1577 aa8.85□□□□□ -0.99
Rfx4-202ENSMUST00000060397 Anp32aO35381 247 aa8.85□□□□□ -0.99
Rfx4-202ENSMUST00000060397 Tnnt3Q9QZ47 272 aa8.84□□□□□ -0.99
Rfx4-202ENSMUST00000060397 Gtf3c3Q3TMP1 882 aa8.84□□□□□ -0.99
Rfx4-202ENSMUST00000060397 BicraF8VPZ9 1578 aa8.81□□□□□ -1
Rfx4-202ENSMUST00000060397 Plcd4Q8K3R3 807 aa8.79□□□□□ -1
Rfx4-202ENSMUST00000060397 Ccdc9Q8VC31 543 aaKnown RBP8.79□□□□□ -1
Rfx4-202ENSMUST00000060397 Irx3P81067 507 aa8.78□□□□□ -1
Rfx4-202ENSMUST00000060397 Cecr2E9Q2Z1 1453 aa8.74□□□□□ -1.01
Rfx4-202ENSMUST00000060397 Pds5bQ4VA53 1446 aaKnown RBP8.74□□□□□ -1.01
Rfx4-202ENSMUST00000060397 Znf316Q6PGE4 1016 aa8.73□□□□□ -1.01
Rfx4-202ENSMUST00000060397 SafbD3YXK2 937 aaKnown RBP8.72□□□□□ -1.01
Rfx4-202ENSMUST00000060397 Upf2A2AT37 1269 aaKnown RBP8.71□□□□□ -1.01
Rfx4-202ENSMUST00000060397 Eif5bQ05D44 1216 aaKnown RBP8.71□□□□□ -1.02
Rfx4-202ENSMUST00000060397 Thoc2B1AZI6 1594 aaKnown RBP8.71□□□□□ -1.02
Rfx4-202ENSMUST00000060397 HrcG5E8J6 738 aa8.7□□□□□ -1.02
Rfx4-202ENSMUST00000060397 Baz1bQ9Z277 1479 aa8.69□□□□□ -1.02
Rfx4-202ENSMUST00000060397 ClspnQ80YR7 1315 aa8.69□□□□□ -1.02
Rfx4-202ENSMUST00000060397 Ipo4Q8VI75 1082 aa8.66□□□□□ -1.02
Rfx4-202ENSMUST00000060397 4933416C03RikQ3V063 378 aa8.65□□□□□ -1.02
Rfx4-202ENSMUST00000060397 Il27Q8K3I6 234 aa8.65□□□□□ -1.02
Rfx4-202ENSMUST00000060397 TimelessQ9R1X4 1197 aa8.64□□□□□ -1.03
Rfx4-202ENSMUST00000060397 Hnrnpul2Q00PI9 745 aaKnown RBP8.63□□□□□ -1.03
Rfx4-202ENSMUST00000060397 Ccdc27Q3V036 639 aa8.63□□□□□ -1.03
Rfx4-202ENSMUST00000060397 Zfp777B9EKF4 885 aa8.63□□□□□ -1.03
Rfx4-202ENSMUST00000060397 Ppargc1bQ8VHJ7 1014 aa8.61□□□□□ -1.03
Rfx4-202ENSMUST00000060397 Synj1Q8CHC4 1574 aa8.59□□□□□ -1.03
Rfx4-202ENSMUST00000060397 Hsp90aa1P07901 733 aaKnown RBP8.59□□□□□ -1.03
Rfx4-202ENSMUST00000060397 NeflP08551 543 aa8.58□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Taok2Q6ZQ29 1240 aa8.58□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Aebp2Q9Z248 504 aaKnown RBP8.57□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Rtn4Q99P72 1162 aaKnown RBP8.57□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Anp32bQ9EST5 272 aaKnown RBP8.57□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Brd4Q9ESU6 1400 aaKnown RBP8.55□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Mier1Q5UAK0 511 aa8.54□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Atad2bE9Q166 1460 aaKnown RBP8.54□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Ercc6F8VPZ5 1481 aa8.54□□□□□ -1.04
Rfx4-202ENSMUST00000060397 CftrP26361 1476 aa8.54□□□□□ -1.04
Rfx4-202ENSMUST00000060397 Chic1Q8CBW7 227 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms