RNA–Protein interactions for RNA: ENSMUST00000058790.11

Ldlrad3-201, Transcript of Low-density lipoprotein receptor class A domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ldlrad3, Length 3,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlrad3-201ENSMUST00000058790 NischQ80TM9 1593 aa26■■□□□ 1.75
Ldlrad3-201ENSMUST00000058790 Gm35339A0A140LHH9 1649 aa25.37■■□□□ 1.65
Ldlrad3-201ENSMUST00000058790 Abcc9P70170 1546 aa24.99■■□□□ 1.59
Ldlrad3-201ENSMUST00000058790 Abcc8B2RUS7 1588 aa24.74■■□□□ 1.55
Ldlrad3-201ENSMUST00000058790 Rhox8Q6VSS7 320 aa24.48■■□□□ 1.51
Ldlrad3-201ENSMUST00000058790 ScribQ80U72 1612 aa23.24■■□□□ 1.31
Ldlrad3-201ENSMUST00000058790 Rtl1Q7M732 1744 aa23.13■■□□□ 1.29
Ldlrad3-201ENSMUST00000058790 NacadQ5SWP3 1504 aa23.06■■□□□ 1.28
Ldlrad3-201ENSMUST00000058790 Ccdc180J3QNE4 1664 aa22.94■■□□□ 1.26
Ldlrad3-201ENSMUST00000058790 Kdm5dQ62240 1548 aa22.94■■□□□ 1.26
Ldlrad3-201ENSMUST00000058790 Dcaf1Q80TR8 1506 aa22.88■■□□□ 1.25
Ldlrad3-201ENSMUST00000058790 Rb1cc1Q9ESK9 1588 aa22.73■■□□□ 1.23
Ldlrad3-201ENSMUST00000058790 Ccdc136Q3TVA9 1136 aa22.62■■□□□ 1.21
Ldlrad3-201ENSMUST00000058790 Zcchc6Q5BLK4 1491 aaKnown RBP22.52■■□□□ 1.2
Ldlrad3-201ENSMUST00000058790 Sycp2Q9CUU3 1500 aa22.44■■□□□ 1.18
Ldlrad3-201ENSMUST00000058790 Baz1aO88379 1555 aa22.4■■□□□ 1.18
Ldlrad3-201ENSMUST00000058790 Ehmt2Q9Z148 1263 aaKnown RBP22.39■■□□□ 1.18
Ldlrad3-201ENSMUST00000058790 Rpgrip1Q9EPQ2 1331 aa22.25■■□□□ 1.15
Ldlrad3-201ENSMUST00000058790 HrcG5E8J6 738 aa22.11■■□□□ 1.13
Ldlrad3-201ENSMUST00000058790 Crybg2B7ZCC2 1516 aa22.06■■□□□ 1.12
Ldlrad3-201ENSMUST00000058790 Trim41Q5NCC3 630 aa22.06■■□□□ 1.12
Ldlrad3-201ENSMUST00000058790 Acin1Q9JIX8 1338 aaKnown RBP21.95■■□□□ 1.1
Ldlrad3-201ENSMUST00000058790 Esf1Q3V1V3 845 aaKnown RBP21.93■■□□□ 1.1
Ldlrad3-201ENSMUST00000058790 BicraF8VPZ9 1578 aa21.78■■□□□ 1.08
Ldlrad3-201ENSMUST00000058790 Cngb1E1AZ71 1325 aa21.69■■□□□ 1.06
Ldlrad3-201ENSMUST00000058790 Smarca2Q6DIC0 1577 aa21.64■■□□□ 1.06
Ldlrad3-201ENSMUST00000058790 Pds5bQ4VA53 1446 aaKnown RBP21.64■■□□□ 1.06
Ldlrad3-201ENSMUST00000058790 Brd4Q9ESU6 1400 aaKnown RBP21.64■■□□□ 1.05
Ldlrad3-201ENSMUST00000058790 Gab3Q8BSM5 595 aa21.54■■□□□ 1.04
Ldlrad3-201ENSMUST00000058790 Cecr2E9Q2Z1 1453 aa21.5■■□□□ 1.03
Ldlrad3-201ENSMUST00000058790 Atad2bE9Q166 1460 aaKnown RBP21.43■■□□□ 1.02
Ldlrad3-201ENSMUST00000058790 Ercc6F8VPZ5 1481 aa21.37■■□□□ 1.01
Ldlrad3-201ENSMUST00000058790 Smarca4Q3TKT4 1613 aaKnown RBP21.37■■□□□ 1.01
Ldlrad3-201ENSMUST00000058790 Cep164Q5DU05 1446 aa21.35■■□□□ 1.01
Ldlrad3-201ENSMUST00000058790 Chic1Q8CBW7 227 aa21.29■■□□□ 1
Ldlrad3-201ENSMUST00000058790 CftrP26361 1476 aa21.2■□□□□ 0.98
Ldlrad3-201ENSMUST00000058790 Pcgf6Q99NA9 353 aa21.19■□□□□ 0.98
Ldlrad3-201ENSMUST00000058790 Iqgap2Q3UQ44 1575 aa21.18■□□□□ 0.98
Ldlrad3-201ENSMUST00000058790 Synj1Q8CHC4 1574 aa21.13■□□□□ 0.97
Ldlrad3-201ENSMUST00000058790 Rsf1E9PWW9 1441 aaKnown RBP21.1■□□□□ 0.97
Ldlrad3-201ENSMUST00000058790 Ubl4bQ9CQ84 188 aa21.1■□□□□ 0.97
Ldlrad3-201ENSMUST00000058790 Cttnbp2B9EJA2 1648 aa21.05■□□□□ 0.96
Ldlrad3-201ENSMUST00000058790 Il27Q8K3I6 234 aa21.03■□□□□ 0.96
Ldlrad3-201ENSMUST00000058790 Golga3P55937 1487 aa20.99■□□□□ 0.95
Ldlrad3-201ENSMUST00000058790 Zeb1Q64318 1117 aa20.97■□□□□ 0.95
Ldlrad3-201ENSMUST00000058790 Ccdc88bQ4QRL3 1481 aa20.94■□□□□ 0.94
Ldlrad3-201ENSMUST00000058790 Supt5hO55201 1082 aaKnown RBP20.92■□□□□ 0.94
Ldlrad3-201ENSMUST00000058790 Phldb1Q6PDH0 1371 aaKnown RBP20.92■□□□□ 0.94
Ldlrad3-201ENSMUST00000058790 Npm1Q61937 292 aaKnown RBP20.88■□□□□ 0.93
Ldlrad3-201ENSMUST00000058790 Frmpd1A2AKB4 1549 aa20.84■□□□□ 0.93
Ldlrad3-201ENSMUST00000058790 Kif15Q6P9L6 1387 aa20.84■□□□□ 0.93
Ldlrad3-201ENSMUST00000058790 Npm2Q80W85 207 aa20.82■□□□□ 0.92
Ldlrad3-201ENSMUST00000058790 Wdr62Q3U3T8 1523 aa20.79■□□□□ 0.92
Ldlrad3-201ENSMUST00000058790 Mier1Q5UAK0 511 aa20.79■□□□□ 0.92
Ldlrad3-201ENSMUST00000058790 Myt1lP97500 1187 aa20.76■□□□□ 0.91
Ldlrad3-201ENSMUST00000058790 Dnajc5bQ9CQ94 199 aa20.74■□□□□ 0.91
Ldlrad3-201ENSMUST00000058790 UbtfP25976 765 aaKnown RBP20.73■□□□□ 0.91
Ldlrad3-201ENSMUST00000058790 NefmP08553 848 aa20.71■□□□□ 0.91
Ldlrad3-201ENSMUST00000058790 Cc2d2aQ8CFW7 1633 aa20.67■□□□□ 0.9
Ldlrad3-201ENSMUST00000058790 Thoc2B1AZI6 1594 aaKnown RBP20.66■□□□□ 0.9
Ldlrad3-201ENSMUST00000058790 Fmn1Q05860 1466 aa20.58■□□□□ 0.89
Ldlrad3-201ENSMUST00000058790 Ccdc18Q640L5 1455 aa20.55■□□□□ 0.88
Ldlrad3-201ENSMUST00000058790 Cux2P70298 1426 aa20.55■□□□□ 0.88
Ldlrad3-201ENSMUST00000058790 Fam135aQ6NS59 1506 aa20.46■□□□□ 0.87
Ldlrad3-201ENSMUST00000058790 Wdr66E9Q743 1299 aa20.46■□□□□ 0.87
Ldlrad3-201ENSMUST00000058790 Las1lA2BE28 776 aaKnown RBP20.4■□□□□ 0.86
Ldlrad3-201ENSMUST00000058790 Top2bQ64511 1612 aa20.37■□□□□ 0.85
Ldlrad3-201ENSMUST00000058790 Sall2Q9QX96 1004 aa20.36■□□□□ 0.85
Ldlrad3-201ENSMUST00000058790 Mrc2Q64449 1479 aa20.35■□□□□ 0.85
Ldlrad3-201ENSMUST00000058790 Neurod1Q60867 357 aa20.31■□□□□ 0.84
Ldlrad3-201ENSMUST00000058790 Baz1bQ9Z277 1479 aa20.3■□□□□ 0.84
Ldlrad3-201ENSMUST00000058790 Plekhg3Q4VAC9 1341 aa20.29■□□□□ 0.84
Ldlrad3-201ENSMUST00000058790 Lamc3Q9R0B6 1581 aa20.27■□□□□ 0.84
Ldlrad3-201ENSMUST00000058790 Ppargc1bQ8VHJ7 1014 aa20.24■□□□□ 0.83
Ldlrad3-201ENSMUST00000058790 Rapgef2Q8CHG7 1496 aa20.23■□□□□ 0.83
Ldlrad3-201ENSMUST00000058790 Cep162Q6ZQ06 1403 aa20.22■□□□□ 0.83
Ldlrad3-201ENSMUST00000058790 LrpprcQ6PB66 1392 aaKnown RBP20.21■□□□□ 0.83
Ldlrad3-201ENSMUST00000058790 Ap3b1Q9Z1T1 1105 aa20.18■□□□□ 0.82
Ldlrad3-201ENSMUST00000058790 Clip1Q922J3 1391 aa20.18■□□□□ 0.82
Ldlrad3-201ENSMUST00000058790 Dhx29Q6PGC1 1365 aaKnown RBP20.16■□□□□ 0.82
Ldlrad3-201ENSMUST00000058790 Aebp2Q9Z248 504 aaKnown RBP20.12■□□□□ 0.81
Ldlrad3-201ENSMUST00000058790 Top2aQ01320 1528 aaKnown RBP20.11■□□□□ 0.81
Ldlrad3-201ENSMUST00000058790 Unc13aQ4KUS2 1712 aa20.1■□□□□ 0.81
Ldlrad3-201ENSMUST00000058790 Camsap1A2AHC3 1581 aa20.07■□□□□ 0.8
Ldlrad3-201ENSMUST00000058790 TonslQ6NZL6 1363 aa20.04■□□□□ 0.8
Ldlrad3-201ENSMUST00000058790 TnnQ80Z71 1560 aa20.03■□□□□ 0.8
Ldlrad3-201ENSMUST00000058790 PogzQ8BZH4 1409 aaKnown RBP19.97■□□□□ 0.79
Ldlrad3-201ENSMUST00000058790 Grin2bQ01097 1482 aa19.96■□□□□ 0.79
Ldlrad3-201ENSMUST00000058790 ClspnQ80YR7 1315 aa19.94■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Efcab5A0JP43 1406 aa19.93■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Duox2A2AQ99 1517 aa19.93■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Nop58Q6DFW4 536 aaKnown RBP19.9■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 NrkQ9R0G8 1455 aa19.9■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Cdk11bP24788 784 aaKnown RBP19.9■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Urb2E9Q7L1 1524 aaKnown RBP19.9■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Eid3Q3V124 375 aa19.89■□□□□ 0.78
Ldlrad3-201ENSMUST00000058790 Shroom4Q1W617 1475 aa19.89■□□□□ 0.77
Ldlrad3-201ENSMUST00000058790 Plb1Q3TTY0 1478 aa19.83■□□□□ 0.76
Ldlrad3-201ENSMUST00000058790 Crocc2F6XLV1 1638 aa19.82■□□□□ 0.76
Ldlrad3-201ENSMUST00000058790 Setd5Q5XJV7 1441 aa19.82■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms