RNA–Protein interactions for RNA: ENSMUST00000049544.13

Ccdc141-202, Transcript of Coiled-coil domain-containing 141, mousemouse

TSL 1 (best) BASIC

Gene Ccdc141, Length 8,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141-202ENSMUST00000049544 Rhox8Q6VSS7 320 aa13.49□□□□□ -0.25
Ccdc141-202ENSMUST00000049544 Cngb1E1AZ71 1325 aa12.86□□□□□ -0.35
Ccdc141-202ENSMUST00000049544 Pelp1Q9DBD5 1123 aaKnown RBP12.79□□□□□ -0.36
Ccdc141-202ENSMUST00000049544 Rpgrip1Q9EPQ2 1331 aa12.77□□□□□ -0.36
Ccdc141-202ENSMUST00000049544 Las1lA2BE28 776 aaKnown RBP12.62□□□□□ -0.39
Ccdc141-202ENSMUST00000049544 Ube2uB1AUC4 352 aa12.29□□□□□ -0.44
Ccdc141-202ENSMUST00000049544 Wdr66E9Q743 1299 aa12.26□□□□□ -0.45
Ccdc141-202ENSMUST00000049544 Amer1Q7TS75 1132 aa12.19□□□□□ -0.46
Ccdc141-202ENSMUST00000049544 Ehmt2Q9Z148 1263 aaKnown RBP12.12□□□□□ -0.47
Ccdc141-202ENSMUST00000049544 Esf1Q3V1V3 845 aaKnown RBP12.08□□□□□ -0.48
Ccdc141-202ENSMUST00000049544 4930567H17RikQ3V0K5 233 aa12.04□□□□□ -0.48
Ccdc141-202ENSMUST00000049544 Zeb1Q64318 1117 aa12.01□□□□□ -0.49
Ccdc141-202ENSMUST00000049544 Npm2Q80W85 207 aa11.91□□□□□ -0.5
Ccdc141-202ENSMUST00000049544 Stra8P70278 393 aa11.9□□□□□ -0.5
Ccdc141-202ENSMUST00000049544 CenpbP27790 599 aa11.85□□□□□ -0.51
Ccdc141-202ENSMUST00000049544 Rtl1Q7M732 1744 aa11.79□□□□□ -0.52
Ccdc141-202ENSMUST00000049544 Ccdc136Q3TVA9 1136 aa11.77□□□□□ -0.53
Ccdc141-202ENSMUST00000049544 Trim41Q5NCC3 630 aa11.68□□□□□ -0.54
Ccdc141-202ENSMUST00000049544 Myt1lP97500 1187 aa11.68□□□□□ -0.54
Ccdc141-202ENSMUST00000049544 Gab3Q8BSM5 595 aa11.67□□□□□ -0.54
Ccdc141-202ENSMUST00000049544 Slc24a1Q91WD8 1130 aa11.58□□□□□ -0.56
Ccdc141-202ENSMUST00000049544 4933416C03RikQ3V063 378 aa11.57□□□□□ -0.56
Ccdc141-202ENSMUST00000049544 Ccdc180J3QNE4 1664 aa11.55□□□□□ -0.56
Ccdc141-202ENSMUST00000049544 Anp32bQ9EST5 272 aaKnown RBP11.53□□□□□ -0.56
Ccdc141-202ENSMUST00000049544 NeflP08551 543 aa11.53□□□□□ -0.56
Ccdc141-202ENSMUST00000049544 NefmP08553 848 aa11.53□□□□□ -0.56
Ccdc141-202ENSMUST00000049544 Ttbk1Q6PCN3 1308 aa11.52□□□□□ -0.57
Ccdc141-202ENSMUST00000049544 Myt1Q8CFC2 1127 aa11.46□□□□□ -0.57
Ccdc141-202ENSMUST00000049544 NrdcQ8BHG1 1161 aa11.42□□□□□ -0.58
Ccdc141-202ENSMUST00000049544 UbtfP25976 765 aaKnown RBP11.41□□□□□ -0.58
Ccdc141-202ENSMUST00000049544 Tnnt3Q9QZ47 272 aa11.37□□□□□ -0.59
Ccdc141-202ENSMUST00000049544 Os9Q8K2C7 672 aa11.34□□□□□ -0.59
Ccdc141-202ENSMUST00000049544 Acin1Q9JIX8 1338 aaKnown RBP11.31□□□□□ -0.6
Ccdc141-202ENSMUST00000049544 Cdk11bP24788 784 aaKnown RBP11.29□□□□□ -0.6
Ccdc141-202ENSMUST00000049544 Rtl5Q5DTT4 599 aa11.28□□□□□ -0.6
Ccdc141-202ENSMUST00000049544 HrcG5E8J6 738 aa11.24□□□□□ -0.61
Ccdc141-202ENSMUST00000049544 Eif5bQ05D44 1216 aaKnown RBP11.22□□□□□ -0.61
Ccdc141-202ENSMUST00000049544 NclP09405 707 aaKnown RBP11.2□□□□□ -0.62
Ccdc141-202ENSMUST00000049544 Neurod1Q60867 357 aa11.17□□□□□ -0.62
Ccdc141-202ENSMUST00000049544 NischQ80TM9 1593 aa11.16□□□□□ -0.62
Ccdc141-202ENSMUST00000049544 Fam50aQ9WV03 339 aaKnown RBP11.13□□□□□ -0.63
Ccdc141-202ENSMUST00000049544 Nop58Q6DFW4 536 aaKnown RBP11.08□□□□□ -0.64
Ccdc141-202ENSMUST00000049544 Il27Q8K3I6 234 aa11.07□□□□□ -0.64
Ccdc141-202ENSMUST00000049544 DiexfQ8BTT6 772 aaKnown RBP11.01□□□□□ -0.65
Ccdc141-202ENSMUST00000049544 Ap3b1Q9Z1T1 1105 aa11□□□□□ -0.65
Ccdc141-202ENSMUST00000049544 CatipB9EKE5 520 aa10.98□□□□□ -0.65
Ccdc141-202ENSMUST00000049544 Gm13697A2AK42 830 aa10.97□□□□□ -0.65
Ccdc141-202ENSMUST00000049544 TonslQ6NZL6 1363 aa10.96□□□□□ -0.65
Ccdc141-202ENSMUST00000049544 DaxxO35613 739 aa10.94□□□□□ -0.66
Ccdc141-202ENSMUST00000049544 Hdac5Q9Z2V6 1113 aa10.92□□□□□ -0.66
Ccdc141-202ENSMUST00000049544 Nlrp6Q91WS2 869 aa10.91□□□□□ -0.66
Ccdc141-202ENSMUST00000049544 Hsp90aa1P07901 733 aaKnown RBP10.86□□□□□ -0.67
Ccdc141-202ENSMUST00000049544 Chic1Q8CBW7 227 aa10.86□□□□□ -0.67
Ccdc141-202ENSMUST00000049544 Pcgf6Q99NA9 353 aa10.84□□□□□ -0.67
Ccdc141-202ENSMUST00000049544 Atp1b4Q99ME6 356 aa10.84□□□□□ -0.67
Ccdc141-202ENSMUST00000049544 Upf2A2AT37 1269 aaKnown RBP10.84□□□□□ -0.67
Ccdc141-202ENSMUST00000049544 Anp32aO35381 247 aa10.83□□□□□ -0.68
Ccdc141-202ENSMUST00000049544 Hnrnpul2Q00PI9 745 aaKnown RBP10.81□□□□□ -0.68
Ccdc141-202ENSMUST00000049544 Polr3glQ8R0C0 218 aa10.81□□□□□ -0.68
Ccdc141-202ENSMUST00000049544 Ythdc1E9Q5K9 736 aaKnown RBP10.79□□□□□ -0.68
Ccdc141-202ENSMUST00000049544 Gm13695A2AK44 830 aa10.78□□□□□ -0.68
Ccdc141-202ENSMUST00000049544 Zbtb7cQ8VCZ7 619 aa10.78□□□□□ -0.68
Ccdc141-202ENSMUST00000049544 Erich6D3Z6S9 713 aa10.73□□□□□ -0.69
Ccdc141-202ENSMUST00000049544 Zcchc6Q5BLK4 1491 aaKnown RBP10.72□□□□□ -0.69
Ccdc141-202ENSMUST00000049544 Ppargc1bQ8VHJ7 1014 aa10.71□□□□□ -0.7
Ccdc141-202ENSMUST00000049544 ArxO35085 564 aa10.68□□□□□ -0.7
Ccdc141-202ENSMUST00000049544 ClspnQ80YR7 1315 aa10.64□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Lmod3E9QA62 571 aa10.64□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Npm1Q61937 292 aaKnown RBP10.63□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Znf326O88291 580 aa10.62□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Ifnlr1Q8CGK5 535 aa10.61□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Zbtb4Q5F293 982 aa10.61□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Supt5hO55201 1082 aaKnown RBP10.6□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Prdm10Q3UTQ7 1184 aa10.59□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Gm35339A0A140LHH9 1649 aa10.59□□□□□ -0.71
Ccdc141-202ENSMUST00000049544 Mier1Q5UAK0 511 aa10.57□□□□□ -0.72
Ccdc141-202ENSMUST00000049544 Trim44Q9QXA7 346 aa10.57□□□□□ -0.72
Ccdc141-202ENSMUST00000049544 DekQ7TNV0 380 aaKnown RBP10.56□□□□□ -0.72
Ccdc141-202ENSMUST00000049544 Lmod2Q3UHZ5 550 aa10.55□□□□□ -0.72
Ccdc141-202ENSMUST00000049544 Fgd1P52734 960 aa10.53□□□□□ -0.72
Ccdc141-202ENSMUST00000049544 Ccdc9Q8VC31 543 aaKnown RBP10.52□□□□□ -0.73
Ccdc141-202ENSMUST00000049544 Rangap1P46061 589 aaKnown RBP10.49□□□□□ -0.73
Ccdc141-202ENSMUST00000049544 Abcc9P70170 1546 aa10.47□□□□□ -0.73
Ccdc141-202ENSMUST00000049544 Plekhg3Q4VAC9 1341 aa10.47□□□□□ -0.73
Ccdc141-202ENSMUST00000049544 Csrnp3P59055 597 aa10.46□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Plppr3Q7TPB0 716 aa10.46□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Adam1bQ8R534 806 aa10.45□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Safb2Q80YR5 991 aaKnown RBP10.44□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Ccer2J3QPU5 274 aa10.43□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 PnnO35691 725 aaKnown RBP10.43□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 PtmaP26350 111 aa10.43□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Vsig10D3YX43 558 aa10.42□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Ppp4r2Q0VGB7 417 aa10.42□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Calr4Q3TQS0 420 aa10.41□□□□□ -0.74
Ccdc141-202ENSMUST00000049544 Hsp90ab1P11499 724 aaKnown RBP10.37□□□□□ -0.75
Ccdc141-202ENSMUST00000049544 Rad21Q61550 635 aaKnown RBP10.35□□□□□ -0.75
Ccdc141-202ENSMUST00000049544 Clstn2Q9ER65 966 aa10.35□□□□□ -0.75
Ccdc141-202ENSMUST00000049544 Fkbp15Q6P9Q6 1216 aaKnown RBP10.33□□□□□ -0.76
Ccdc141-202ENSMUST00000049544 Htatsf1Q8BGC0 757 aa10.32□□□□□ -0.76
Ccdc141-202ENSMUST00000049544 Mapk8ip2Q9ERE9 830 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms