RNA–Protein interactions for RNA: ENSMUST00000048028.14

Stag3-201, Transcript of Cohesin subunit SA-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag3, Length 4,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3-201ENSMUST00000048028 Rhox8Q6VSS7 320 aa15.51■□□□□ 0.07
Stag3-201ENSMUST00000048028 NischQ80TM9 1593 aa14.88□□□□□ -0.03
Stag3-201ENSMUST00000048028 Abcc9P70170 1546 aa14.05□□□□□ -0.16
Stag3-201ENSMUST00000048028 Ccdc136Q3TVA9 1136 aa14.03□□□□□ -0.16
Stag3-201ENSMUST00000048028 Abcc8B2RUS7 1588 aa13.85□□□□□ -0.19
Stag3-201ENSMUST00000048028 Trim41Q5NCC3 630 aa13.81□□□□□ -0.2
Stag3-201ENSMUST00000048028 Esf1Q3V1V3 845 aaKnown RBP13.79□□□□□ -0.2
Stag3-201ENSMUST00000048028 Cngb1E1AZ71 1325 aa13.69□□□□□ -0.22
Stag3-201ENSMUST00000048028 Gm35339A0A140LHH9 1649 aa13.61□□□□□ -0.23
Stag3-201ENSMUST00000048028 Gab3Q8BSM5 595 aa13.42□□□□□ -0.26
Stag3-201ENSMUST00000048028 Zcchc6Q5BLK4 1491 aaKnown RBP13.4□□□□□ -0.26
Stag3-201ENSMUST00000048028 Ehmt2Q9Z148 1263 aaKnown RBP13.39□□□□□ -0.27
Stag3-201ENSMUST00000048028 Rpgrip1Q9EPQ2 1331 aa13.35□□□□□ -0.27
Stag3-201ENSMUST00000048028 Npm2Q80W85 207 aa13.3□□□□□ -0.28
Stag3-201ENSMUST00000048028 Zeb1Q64318 1117 aa13.27□□□□□ -0.28
Stag3-201ENSMUST00000048028 Ccdc180J3QNE4 1664 aa13.26□□□□□ -0.29
Stag3-201ENSMUST00000048028 HrcG5E8J6 738 aa13.26□□□□□ -0.29
Stag3-201ENSMUST00000048028 Rtl1Q7M732 1744 aa13.23□□□□□ -0.29
Stag3-201ENSMUST00000048028 Myt1lP97500 1187 aa13.17□□□□□ -0.3
Stag3-201ENSMUST00000048028 Il27Q8K3I6 234 aa13.05□□□□□ -0.32
Stag3-201ENSMUST00000048028 NacadQ5SWP3 1504 aa13.03□□□□□ -0.32
Stag3-201ENSMUST00000048028 Rb1cc1Q9ESK9 1588 aa13.01□□□□□ -0.33
Stag3-201ENSMUST00000048028 Ube2uB1AUC4 352 aa12.89□□□□□ -0.35
Stag3-201ENSMUST00000048028 Brd4Q9ESU6 1400 aaKnown RBP12.87□□□□□ -0.35
Stag3-201ENSMUST00000048028 Las1lA2BE28 776 aaKnown RBP12.85□□□□□ -0.35
Stag3-201ENSMUST00000048028 Dcaf1Q80TR8 1506 aa12.84□□□□□ -0.35
Stag3-201ENSMUST00000048028 UbtfP25976 765 aaKnown RBP12.81□□□□□ -0.36
Stag3-201ENSMUST00000048028 Kdm5dQ62240 1548 aa12.79□□□□□ -0.36
Stag3-201ENSMUST00000048028 Baz1aO88379 1555 aa12.79□□□□□ -0.36
Stag3-201ENSMUST00000048028 Npm1Q61937 292 aaKnown RBP12.77□□□□□ -0.37
Stag3-201ENSMUST00000048028 Acin1Q9JIX8 1338 aaKnown RBP12.76□□□□□ -0.37
Stag3-201ENSMUST00000048028 Wdr66E9Q743 1299 aa12.73□□□□□ -0.37
Stag3-201ENSMUST00000048028 NefmP08553 848 aa12.68□□□□□ -0.38
Stag3-201ENSMUST00000048028 Chic1Q8CBW7 227 aa12.61□□□□□ -0.39
Stag3-201ENSMUST00000048028 Ap3b1Q9Z1T1 1105 aa12.61□□□□□ -0.39
Stag3-201ENSMUST00000048028 Ubl4bQ9CQ84 188 aa12.6□□□□□ -0.39
Stag3-201ENSMUST00000048028 Cep164Q5DU05 1446 aa12.54□□□□□ -0.4
Stag3-201ENSMUST00000048028 ScribQ80U72 1612 aa12.53□□□□□ -0.4
Stag3-201ENSMUST00000048028 Sycp2Q9CUU3 1500 aa12.52□□□□□ -0.4
Stag3-201ENSMUST00000048028 Fam50aQ9WV03 339 aaKnown RBP12.47□□□□□ -0.41
Stag3-201ENSMUST00000048028 Crybg2B7ZCC2 1516 aa12.47□□□□□ -0.41
Stag3-201ENSMUST00000048028 Golga3P55937 1487 aa12.44□□□□□ -0.42
Stag3-201ENSMUST00000048028 Pds5bQ4VA53 1446 aaKnown RBP12.39□□□□□ -0.43
Stag3-201ENSMUST00000048028 Plekhg3Q4VAC9 1341 aa12.38□□□□□ -0.43
Stag3-201ENSMUST00000048028 Rsf1E9PWW9 1441 aaKnown RBP12.37□□□□□ -0.43
Stag3-201ENSMUST00000048028 Lmod2Q3UHZ5 550 aa12.37□□□□□ -0.43
Stag3-201ENSMUST00000048028 Ercc6F8VPZ5 1481 aa12.36□□□□□ -0.43
Stag3-201ENSMUST00000048028 Kif15Q6P9L6 1387 aa12.35□□□□□ -0.43
Stag3-201ENSMUST00000048028 Mier1Q5UAK0 511 aa12.34□□□□□ -0.43
Stag3-201ENSMUST00000048028 Clip1Q922J3 1391 aa12.33□□□□□ -0.44
Stag3-201ENSMUST00000048028 NclP09405 707 aaKnown RBP12.26□□□□□ -0.45
Stag3-201ENSMUST00000048028 Cecr2E9Q2Z1 1453 aa12.23□□□□□ -0.45
Stag3-201ENSMUST00000048028 Smarca2Q6DIC0 1577 aa12.22□□□□□ -0.45
Stag3-201ENSMUST00000048028 Ccdc18Q640L5 1455 aa12.21□□□□□ -0.46
Stag3-201ENSMUST00000048028 TonslQ6NZL6 1363 aa12.2□□□□□ -0.46
Stag3-201ENSMUST00000048028 CftrP26361 1476 aa12.2□□□□□ -0.46
Stag3-201ENSMUST00000048028 Neurod1Q60867 357 aa12.19□□□□□ -0.46
Stag3-201ENSMUST00000048028 Atad2bE9Q166 1460 aaKnown RBP12.17□□□□□ -0.46
Stag3-201ENSMUST00000048028 Fkbp15Q6P9Q6 1216 aaKnown RBP12.15□□□□□ -0.46
Stag3-201ENSMUST00000048028 Stra8P70278 393 aa12.13□□□□□ -0.47
Stag3-201ENSMUST00000048028 Setd5Q5XJV7 1441 aa12.13□□□□□ -0.47
Stag3-201ENSMUST00000048028 Ifnlr1Q8CGK5 535 aa12.13□□□□□ -0.47
Stag3-201ENSMUST00000048028 Pcgf6Q99NA9 353 aa12.11□□□□□ -0.47
Stag3-201ENSMUST00000048028 Ccdc88bQ4QRL3 1481 aa12.11□□□□□ -0.47
Stag3-201ENSMUST00000048028 Fmn1Q05860 1466 aa12.1□□□□□ -0.47
Stag3-201ENSMUST00000048028 BlmO88700 1416 aa12.09□□□□□ -0.47
Stag3-201ENSMUST00000048028 Zbtb7cQ8VCZ7 619 aa12.07□□□□□ -0.48
Stag3-201ENSMUST00000048028 Smarca4Q3TKT4 1613 aaKnown RBP12.06□□□□□ -0.48
Stag3-201ENSMUST00000048028 Slc24a1Q91WD8 1130 aa12.06□□□□□ -0.48
Stag3-201ENSMUST00000048028 Phldb1Q6PDH0 1371 aaKnown RBP12.06□□□□□ -0.48
Stag3-201ENSMUST00000048028 Synj1Q8CHC4 1574 aa12.05□□□□□ -0.48
Stag3-201ENSMUST00000048028 Hnrnpul2Q00PI9 745 aaKnown RBP12.04□□□□□ -0.48
Stag3-201ENSMUST00000048028 Os9Q8K2C7 672 aa12.04□□□□□ -0.48
Stag3-201ENSMUST00000048028 Ccer2J3QPU5 274 aa12.03□□□□□ -0.48
Stag3-201ENSMUST00000048028 Eea1Q8BL66 1411 aa12.02□□□□□ -0.48
Stag3-201ENSMUST00000048028 Cdk11bP24788 784 aaKnown RBP12.02□□□□□ -0.48
Stag3-201ENSMUST00000048028 Ppargc1bQ8VHJ7 1014 aa12.02□□□□□ -0.48
Stag3-201ENSMUST00000048028 Eid3Q3V124 375 aa12.02□□□□□ -0.49
Stag3-201ENSMUST00000048028 Pelp1Q9DBD5 1123 aaKnown RBP12.02□□□□□ -0.49
Stag3-201ENSMUST00000048028 Supt5hO55201 1082 aaKnown RBP12□□□□□ -0.49
Stag3-201ENSMUST00000048028 Anp32bQ9EST5 272 aaKnown RBP12□□□□□ -0.49
Stag3-201ENSMUST00000048028 Cux2P70298 1426 aa11.98□□□□□ -0.49
Stag3-201ENSMUST00000048028 Nop58Q6DFW4 536 aaKnown RBP11.96□□□□□ -0.49
Stag3-201ENSMUST00000048028 NrdcQ8BHG1 1161 aa11.95□□□□□ -0.5
Stag3-201ENSMUST00000048028 Arhgap27A2AB59 869 aa11.95□□□□□ -0.5
Stag3-201ENSMUST00000048028 Chic2Q9D9G3 165 aa11.95□□□□□ -0.5
Stag3-201ENSMUST00000048028 Cep162Q6ZQ06 1403 aa11.95□□□□□ -0.5
Stag3-201ENSMUST00000048028 Cttnbp2B9EJA2 1648 aa11.93□□□□□ -0.5
Stag3-201ENSMUST00000048028 Iqgap2Q3UQ44 1575 aa11.92□□□□□ -0.5
Stag3-201ENSMUST00000048028 Hdac5Q9Z2V6 1113 aa11.9□□□□□ -0.51
Stag3-201ENSMUST00000048028 ClspnQ80YR7 1315 aa11.89□□□□□ -0.51
Stag3-201ENSMUST00000048028 Erich6D3Z6S9 713 aa11.86□□□□□ -0.51
Stag3-201ENSMUST00000048028 Gm13697A2AK42 830 aa11.85□□□□□ -0.51
Stag3-201ENSMUST00000048028 Clstn2Q9ER65 966 aa11.84□□□□□ -0.51
Stag3-201ENSMUST00000048028 LrpprcQ6PB66 1392 aaKnown RBP11.84□□□□□ -0.51
Stag3-201ENSMUST00000048028 BicraF8VPZ9 1578 aa11.82□□□□□ -0.52
Stag3-201ENSMUST00000048028 Ttbk1Q6PCN3 1308 aa11.82□□□□□ -0.52
Stag3-201ENSMUST00000048028 Aebp1Q640N1 1128 aa11.81□□□□□ -0.52
Stag3-201ENSMUST00000048028 Baz1bQ9Z277 1479 aa11.79□□□□□ -0.52
Stag3-201ENSMUST00000048028 Tnnt3Q9QZ47 272 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 75.2 ms