RNA–Protein interactions for RNA: ENSMUST00000046769.15

Ckap5-201, Transcript of Cytoskeleton-associated protein 5, mousemouse

TSL 1 (best) BASIC

Gene Ckap5, Length 6,511 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap5-201ENSMUST00000046769 Rhox8Q6VSS7 320 aa10.01□□□□□ -0.81
Ckap5-201ENSMUST00000046769 Gm35339A0A140LHH9 1649 aa9.77□□□□□ -0.84
Ckap5-201ENSMUST00000046769 NischQ80TM9 1593 aa9.74□□□□□ -0.85
Ckap5-201ENSMUST00000046769 Abcc9P70170 1546 aa9.47□□□□□ -0.89
Ckap5-201ENSMUST00000046769 Abcc8B2RUS7 1588 aa9.29□□□□□ -0.92
Ckap5-201ENSMUST00000046769 Esf1Q3V1V3 845 aaKnown RBP9.14□□□□□ -0.95
Ckap5-201ENSMUST00000046769 Zeb1Q64318 1117 aa9.07□□□□□ -0.96
Ckap5-201ENSMUST00000046769 Rpgrip1Q9EPQ2 1331 aa9.04□□□□□ -0.96
Ckap5-201ENSMUST00000046769 Cngb1E1AZ71 1325 aa9.03□□□□□ -0.96
Ckap5-201ENSMUST00000046769 Dcaf1Q80TR8 1506 aa8.98□□□□□ -0.97
Ckap5-201ENSMUST00000046769 Ube2uB1AUC4 352 aa8.95□□□□□ -0.98
Ckap5-201ENSMUST00000046769 Las1lA2BE28 776 aaKnown RBP8.94□□□□□ -0.98
Ckap5-201ENSMUST00000046769 Pelp1Q9DBD5 1123 aaKnown RBP8.91□□□□□ -0.98
Ckap5-201ENSMUST00000046769 Npm2Q80W85 207 aa8.85□□□□□ -0.99
Ckap5-201ENSMUST00000046769 NacadQ5SWP3 1504 aa8.79□□□□□ -1
Ckap5-201ENSMUST00000046769 Rtl1Q7M732 1744 aa8.77□□□□□ -1.01
Ckap5-201ENSMUST00000046769 Ccdc180J3QNE4 1664 aa8.74□□□□□ -1.01
Ckap5-201ENSMUST00000046769 Ccdc136Q3TVA9 1136 aa8.71□□□□□ -1.01
Ckap5-201ENSMUST00000046769 Trim41Q5NCC3 630 aa8.7□□□□□ -1.02
Ckap5-201ENSMUST00000046769 Crybg2B7ZCC2 1516 aa8.63□□□□□ -1.03
Ckap5-201ENSMUST00000046769 Myt1lP97500 1187 aa8.59□□□□□ -1.03
Ckap5-201ENSMUST00000046769 ScribQ80U72 1612 aa8.56□□□□□ -1.04
Ckap5-201ENSMUST00000046769 Il27Q8K3I6 234 aa8.54□□□□□ -1.04
Ckap5-201ENSMUST00000046769 Kdm5dQ62240 1548 aa8.53□□□□□ -1.04
Ckap5-201ENSMUST00000046769 Gab3Q8BSM5 595 aa8.53□□□□□ -1.04
Ckap5-201ENSMUST00000046769 Wdr66E9Q743 1299 aa8.52□□□□□ -1.04
Ckap5-201ENSMUST00000046769 Rb1cc1Q9ESK9 1588 aa8.52□□□□□ -1.05
Ckap5-201ENSMUST00000046769 Baz1aO88379 1555 aa8.51□□□□□ -1.05
Ckap5-201ENSMUST00000046769 Ttbk1Q6PCN3 1308 aa8.5□□□□□ -1.05
Ckap5-201ENSMUST00000046769 Amer1Q7TS75 1132 aa8.48□□□□□ -1.05
Ckap5-201ENSMUST00000046769 Sycp2Q9CUU3 1500 aa8.47□□□□□ -1.05
Ckap5-201ENSMUST00000046769 Gm13697A2AK42 830 aa8.45□□□□□ -1.06
Ckap5-201ENSMUST00000046769 4930567H17RikQ3V0K5 233 aa8.44□□□□□ -1.06
Ckap5-201ENSMUST00000046769 CenpbP27790 599 aa8.4□□□□□ -1.06
Ckap5-201ENSMUST00000046769 Os9Q8K2C7 672 aa8.37□□□□□ -1.07
Ckap5-201ENSMUST00000046769 Baz1bQ9Z277 1479 aa8.35□□□□□ -1.07
Ckap5-201ENSMUST00000046769 Npm1Q61937 292 aaKnown RBP8.32□□□□□ -1.08
Ckap5-201ENSMUST00000046769 NclP09405 707 aaKnown RBP8.31□□□□□ -1.08
Ckap5-201ENSMUST00000046769 Smarca2Q6DIC0 1577 aa8.3□□□□□ -1.08
Ckap5-201ENSMUST00000046769 Plppr3Q7TPB0 716 aa8.3□□□□□ -1.08
Ckap5-201ENSMUST00000046769 Myt1Q8CFC2 1127 aa8.3□□□□□ -1.08
Ckap5-201ENSMUST00000046769 Pds5bQ4VA53 1446 aaKnown RBP8.3□□□□□ -1.08
Ckap5-201ENSMUST00000046769 Ifnlr1Q8CGK5 535 aa8.3□□□□□ -1.08
Ckap5-201ENSMUST00000046769 Zcchc6Q5BLK4 1491 aaKnown RBP8.27□□□□□ -1.09
Ckap5-201ENSMUST00000046769 Brd4Q9ESU6 1400 aaKnown RBP8.27□□□□□ -1.09
Ckap5-201ENSMUST00000046769 Stra8P70278 393 aa8.26□□□□□ -1.09
Ckap5-201ENSMUST00000046769 Ehmt2Q9Z148 1263 aaKnown RBP8.24□□□□□ -1.09
Ckap5-201ENSMUST00000046769 Gm13695A2AK44 830 aa8.23□□□□□ -1.09
Ckap5-201ENSMUST00000046769 HrcG5E8J6 738 aa8.22□□□□□ -1.09
Ckap5-201ENSMUST00000046769 Safb2Q80YR5 991 aaKnown RBP8.2□□□□□ -1.1
Ckap5-201ENSMUST00000046769 Anp32bQ9EST5 272 aaKnown RBP8.19□□□□□ -1.1
Ckap5-201ENSMUST00000046769 Ercc6F8VPZ5 1481 aa8.17□□□□□ -1.1
Ckap5-201ENSMUST00000046769 Atad2bE9Q166 1460 aaKnown RBP8.16□□□□□ -1.1
Ckap5-201ENSMUST00000046769 DiexfQ8BTT6 772 aaKnown RBP8.16□□□□□ -1.1
Ckap5-201ENSMUST00000046769 Slc24a1Q91WD8 1130 aa8.13□□□□□ -1.11
Ckap5-201ENSMUST00000046769 Atp1b4Q99ME6 356 aa8.13□□□□□ -1.11
Ckap5-201ENSMUST00000046769 Hnrnpul2Q00PI9 745 aaKnown RBP8.11□□□□□ -1.11
Ckap5-201ENSMUST00000046769 Smarca4Q3TKT4 1613 aaKnown RBP8.1□□□□□ -1.11
Ckap5-201ENSMUST00000046769 Ap3b1Q9Z1T1 1105 aa8.1□□□□□ -1.11
Ckap5-201ENSMUST00000046769 UbtfP25976 765 aaKnown RBP8.09□□□□□ -1.11
Ckap5-201ENSMUST00000046769 Hdac5Q9Z2V6 1113 aa8.08□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Fam50aQ9WV03 339 aaKnown RBP8.08□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Chic1Q8CBW7 227 aa8.07□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Zbtb7cQ8VCZ7 619 aa8.06□□□□□ -1.12
Ckap5-201ENSMUST00000046769 NefmP08553 848 aa8.05□□□□□ -1.12
Ckap5-201ENSMUST00000046769 4933416C03RikQ3V063 378 aa8.05□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Ubl4bQ9CQ84 188 aa8.04□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Neurod1Q60867 357 aa8.03□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Fkbp15Q6P9Q6 1216 aaKnown RBP8.03□□□□□ -1.12
Ckap5-201ENSMUST00000046769 Cttnbp2B9EJA2 1648 aa8.02□□□□□ -1.12
Ckap5-201ENSMUST00000046769 BicraF8VPZ9 1578 aa8.02□□□□□ -1.13
Ckap5-201ENSMUST00000046769 Erich6D3Z6S9 713 aa8□□□□□ -1.13
Ckap5-201ENSMUST00000046769 Rtl5Q5DTT4 599 aa8□□□□□ -1.13
Ckap5-201ENSMUST00000046769 Tnnt3Q9QZ47 272 aa7.99□□□□□ -1.13
Ckap5-201ENSMUST00000046769 Acin1Q9JIX8 1338 aaKnown RBP7.96□□□□□ -1.14
Ckap5-201ENSMUST00000046769 Iqgap2Q3UQ44 1575 aa7.95□□□□□ -1.14
Ckap5-201ENSMUST00000046769 NrdcQ8BHG1 1161 aa7.95□□□□□ -1.14
Ckap5-201ENSMUST00000046769 Phldb1Q6PDH0 1371 aaKnown RBP7.93□□□□□ -1.14
Ckap5-201ENSMUST00000046769 CftrP26361 1476 aa7.93□□□□□ -1.14
Ckap5-201ENSMUST00000046769 Rsf1E9PWW9 1441 aaKnown RBP7.92□□□□□ -1.14
Ckap5-201ENSMUST00000046769 MyclP10166 368 aa7.92□□□□□ -1.14
Ckap5-201ENSMUST00000046769 NeflP08551 543 aa7.91□□□□□ -1.14
Ckap5-201ENSMUST00000046769 Golga3P55937 1487 aa7.91□□□□□ -1.14
Ckap5-201ENSMUST00000046769 Cdk11bP24788 784 aaKnown RBP7.9□□□□□ -1.14
Ckap5-201ENSMUST00000046769 Lmod2Q3UHZ5 550 aa7.85□□□□□ -1.15
Ckap5-201ENSMUST00000046769 Fmn1Q05860 1466 aa7.85□□□□□ -1.15
Ckap5-201ENSMUST00000046769 Wdr62Q3U3T8 1523 aa7.84□□□□□ -1.15
Ckap5-201ENSMUST00000046769 Ccdc18Q640L5 1455 aa7.84□□□□□ -1.15
Ckap5-201ENSMUST00000046769 Fam135aQ6NS59 1506 aa7.83□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Ppp1r18Q8BQ30 594 aa7.82□□□□□ -1.16
Ckap5-201ENSMUST00000046769 P3h3Q8CG70 732 aa7.81□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Nlrp6Q91WS2 869 aa7.81□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Thoc2B1AZI6 1594 aaKnown RBP7.81□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Ggt6Q6PDE7 497 aa7.81□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Cep164Q5DU05 1446 aa7.8□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Synj1Q8CHC4 1574 aa7.8□□□□□ -1.16
Ckap5-201ENSMUST00000046769 Cecr2E9Q2Z1 1453 aa7.77□□□□□ -1.17
Ckap5-201ENSMUST00000046769 MlecQ6ZQI3 291 aaKnown RBP7.77□□□□□ -1.17
Ckap5-201ENSMUST00000046769 Clstn2Q9ER65 966 aa7.76□□□□□ -1.17
Ckap5-201ENSMUST00000046769 Frmpd1A2AKB4 1549 aa7.73□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms