RNA–Protein interactions for RNA: ENSMUST00000046206.3

Rprd1a-201, Transcript of Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rprd1a, Length 4,297 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1a-201ENSMUST00000046206 Rhox8Q6VSS7 320 aa28.04■■■□□ 2.08
Rprd1a-201ENSMUST00000046206 NischQ80TM9 1593 aa27.13■■□□□ 1.93
Rprd1a-201ENSMUST00000046206 Abcc9P70170 1546 aa25.78■■□□□ 1.72
Rprd1a-201ENSMUST00000046206 Ccdc136Q3TVA9 1136 aa25.56■■□□□ 1.68
Rprd1a-201ENSMUST00000046206 Ehmt2Q9Z148 1263 aaKnown RBP25.37■■□□□ 1.65
Rprd1a-201ENSMUST00000046206 Abcc8B2RUS7 1588 aa25.28■■□□□ 1.64
Rprd1a-201ENSMUST00000046206 Rpgrip1Q9EPQ2 1331 aa24.99■■□□□ 1.59
Rprd1a-201ENSMUST00000046206 Gm35339A0A140LHH9 1649 aa24.96■■□□□ 1.59
Rprd1a-201ENSMUST00000046206 Trim41Q5NCC3 630 aa24.77■■□□□ 1.56
Rprd1a-201ENSMUST00000046206 Cngb1E1AZ71 1325 aa24.71■■□□□ 1.55
Rprd1a-201ENSMUST00000046206 Ccdc180J3QNE4 1664 aa24.71■■□□□ 1.55
Rprd1a-201ENSMUST00000046206 Rtl1Q7M732 1744 aa24.61■■□□□ 1.53
Rprd1a-201ENSMUST00000046206 Gab3Q8BSM5 595 aa24.56■■□□□ 1.52
Rprd1a-201ENSMUST00000046206 Esf1Q3V1V3 845 aaKnown RBP24.53■■□□□ 1.52
Rprd1a-201ENSMUST00000046206 HrcG5E8J6 738 aa24.35■■□□□ 1.49
Rprd1a-201ENSMUST00000046206 Acin1Q9JIX8 1338 aaKnown RBP24.23■■□□□ 1.47
Rprd1a-201ENSMUST00000046206 Zcchc6Q5BLK4 1491 aaKnown RBP24.23■■□□□ 1.47
Rprd1a-201ENSMUST00000046206 Zeb1Q64318 1117 aa23.9■■□□□ 1.42
Rprd1a-201ENSMUST00000046206 Myt1lP97500 1187 aa23.86■■□□□ 1.41
Rprd1a-201ENSMUST00000046206 Npm2Q80W85 207 aa23.79■■□□□ 1.4
Rprd1a-201ENSMUST00000046206 Rb1cc1Q9ESK9 1588 aa23.79■■□□□ 1.4
Rprd1a-201ENSMUST00000046206 Dcaf1Q80TR8 1506 aa23.63■■□□□ 1.37
Rprd1a-201ENSMUST00000046206 Wdr66E9Q743 1299 aa23.61■■□□□ 1.37
Rprd1a-201ENSMUST00000046206 UbtfP25976 765 aaKnown RBP23.57■■□□□ 1.36
Rprd1a-201ENSMUST00000046206 Las1lA2BE28 776 aaKnown RBP23.51■■□□□ 1.35
Rprd1a-201ENSMUST00000046206 Pcgf6Q99NA9 353 aa23.41■■□□□ 1.34
Rprd1a-201ENSMUST00000046206 NefmP08553 848 aa23.37■■□□□ 1.33
Rprd1a-201ENSMUST00000046206 Chic1Q8CBW7 227 aa23.37■■□□□ 1.33
Rprd1a-201ENSMUST00000046206 NacadQ5SWP3 1504 aa23.36■■□□□ 1.33
Rprd1a-201ENSMUST00000046206 Baz1aO88379 1555 aa23.34■■□□□ 1.33
Rprd1a-201ENSMUST00000046206 Il27Q8K3I6 234 aa23.33■■□□□ 1.32
Rprd1a-201ENSMUST00000046206 Kdm5dQ62240 1548 aa23.29■■□□□ 1.32
Rprd1a-201ENSMUST00000046206 Cep164Q5DU05 1446 aa23.2■■□□□ 1.3
Rprd1a-201ENSMUST00000046206 Brd4Q9ESU6 1400 aaKnown RBP23.18■■□□□ 1.3
Rprd1a-201ENSMUST00000046206 Supt5hO55201 1082 aaKnown RBP23.13■■□□□ 1.29
Rprd1a-201ENSMUST00000046206 Mier1Q5UAK0 511 aa23.1■■□□□ 1.29
Rprd1a-201ENSMUST00000046206 Ube2uB1AUC4 352 aa23.08■■□□□ 1.28
Rprd1a-201ENSMUST00000046206 ScribQ80U72 1612 aa23.02■■□□□ 1.28
Rprd1a-201ENSMUST00000046206 Ap3b1Q9Z1T1 1105 aa22.98■■□□□ 1.27
Rprd1a-201ENSMUST00000046206 Ppargc1bQ8VHJ7 1014 aa22.89■■□□□ 1.25
Rprd1a-201ENSMUST00000046206 Plekhg3Q4VAC9 1341 aa22.79■■□□□ 1.24
Rprd1a-201ENSMUST00000046206 Rsf1E9PWW9 1441 aaKnown RBP22.77■■□□□ 1.24
Rprd1a-201ENSMUST00000046206 Golga3P55937 1487 aa22.72■■□□□ 1.23
Rprd1a-201ENSMUST00000046206 Fam50aQ9WV03 339 aaKnown RBP22.66■■□□□ 1.22
Rprd1a-201ENSMUST00000046206 Sycp2Q9CUU3 1500 aa22.58■■□□□ 1.21
Rprd1a-201ENSMUST00000046206 TonslQ6NZL6 1363 aa22.56■■□□□ 1.2
Rprd1a-201ENSMUST00000046206 Ccdc88bQ4QRL3 1481 aa22.55■■□□□ 1.2
Rprd1a-201ENSMUST00000046206 Cdk11bP24788 784 aaKnown RBP22.54■■□□□ 1.2
Rprd1a-201ENSMUST00000046206 Clip1Q922J3 1391 aa22.5■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Crybg2B7ZCC2 1516 aa22.49■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Sall2Q9QX96 1004 aa22.48■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Nop58Q6DFW4 536 aaKnown RBP22.48■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Smarca2Q6DIC0 1577 aa22.48■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Lmod2Q3UHZ5 550 aa22.48■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Cecr2E9Q2Z1 1453 aa22.48■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Npm1Q61937 292 aaKnown RBP22.46■■□□□ 1.19
Rprd1a-201ENSMUST00000046206 Eid3Q3V124 375 aa22.39■■□□□ 1.17
Rprd1a-201ENSMUST00000046206 NclP09405 707 aaKnown RBP22.35■■□□□ 1.17
Rprd1a-201ENSMUST00000046206 Neurod1Q60867 357 aa22.32■■□□□ 1.16
Rprd1a-201ENSMUST00000046206 Slc24a1Q91WD8 1130 aa22.31■■□□□ 1.16
Rprd1a-201ENSMUST00000046206 ClspnQ80YR7 1315 aa22.25■■□□□ 1.15
Rprd1a-201ENSMUST00000046206 CftrP26361 1476 aa22.23■■□□□ 1.15
Rprd1a-201ENSMUST00000046206 Ubl4bQ9CQ84 188 aa22.17■■□□□ 1.14
Rprd1a-201ENSMUST00000046206 Synj1Q8CHC4 1574 aa22.16■■□□□ 1.14
Rprd1a-201ENSMUST00000046206 CenpbP27790 599 aa22.12■■□□□ 1.13
Rprd1a-201ENSMUST00000046206 Mapk8ip2Q9ERE9 830 aa22.11■■□□□ 1.13
Rprd1a-201ENSMUST00000046206 Kif15Q6P9L6 1387 aa22.1■■□□□ 1.13
Rprd1a-201ENSMUST00000046206 Aebp2Q9Z248 504 aaKnown RBP22.09■■□□□ 1.13
Rprd1a-201ENSMUST00000046206 Stra8P70278 393 aa22.07■■□□□ 1.12
Rprd1a-201ENSMUST00000046206 Setd5Q5XJV7 1441 aa22.05■■□□□ 1.12
Rprd1a-201ENSMUST00000046206 BlmO88700 1416 aa21.99■■□□□ 1.11
Rprd1a-201ENSMUST00000046206 Fmn1Q05860 1466 aa21.98■■□□□ 1.11
Rprd1a-201ENSMUST00000046206 Cep162Q6ZQ06 1403 aa21.98■■□□□ 1.11
Rprd1a-201ENSMUST00000046206 Eea1Q8BL66 1411 aa21.87■■□□□ 1.09
Rprd1a-201ENSMUST00000046206 Anks4bQ8K3X6 423 aa21.84■■□□□ 1.09
Rprd1a-201ENSMUST00000046206 Pds5bQ4VA53 1446 aaKnown RBP21.83■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Csrnp3P59055 597 aa21.81■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Chic2Q9D9G3 165 aa21.81■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Rapgef2Q8CHG7 1496 aa21.8■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Tnnt3Q9QZ47 272 aa21.79■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Ercc6F8VPZ5 1481 aa21.78■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Smarca4Q3TKT4 1613 aaKnown RBP21.78■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Zbtb7cQ8VCZ7 619 aa21.78■■□□□ 1.08
Rprd1a-201ENSMUST00000046206 Eif5bQ05D44 1216 aaKnown RBP21.75■■□□□ 1.07
Rprd1a-201ENSMUST00000046206 NrdcQ8BHG1 1161 aa21.75■■□□□ 1.07
Rprd1a-201ENSMUST00000046206 Gm38655A0A286YDK6 273 aa21.74■■□□□ 1.07
Rprd1a-201ENSMUST00000046206 Ccdc18Q640L5 1455 aa21.74■■□□□ 1.07
Rprd1a-201ENSMUST00000046206 Cttnbp2B9EJA2 1648 aa21.73■■□□□ 1.07
Rprd1a-201ENSMUST00000046206 Atad2bE9Q166 1460 aaKnown RBP21.67■■□□□ 1.06
Rprd1a-201ENSMUST00000046206 Fkbp15Q6P9Q6 1216 aaKnown RBP21.67■■□□□ 1.06
Rprd1a-201ENSMUST00000046206 Ccer2J3QPU5 274 aa21.64■■□□□ 1.06
Rprd1a-201ENSMUST00000046206 Pelp1Q9DBD5 1123 aaKnown RBP21.64■■□□□ 1.05
Rprd1a-201ENSMUST00000046206 BicraF8VPZ9 1578 aa21.6■■□□□ 1.05
Rprd1a-201ENSMUST00000046206 Iqgap2Q3UQ44 1575 aa21.53■■□□□ 1.04
Rprd1a-201ENSMUST00000046206 Zbtb4Q5F293 982 aa21.52■■□□□ 1.04
Rprd1a-201ENSMUST00000046206 Cc2d2aQ8CFW7 1633 aa21.51■■□□□ 1.03
Rprd1a-201ENSMUST00000046206 Hnrnpul2Q00PI9 745 aaKnown RBP21.5■■□□□ 1.03
Rprd1a-201ENSMUST00000046206 Ifnlr1Q8CGK5 535 aa21.47■■□□□ 1.03
Rprd1a-201ENSMUST00000046206 Anp32bQ9EST5 272 aaKnown RBP21.43■■□□□ 1.02
Rprd1a-201ENSMUST00000046206 Os9Q8K2C7 672 aa21.43■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 169 ms