RNA–Protein interactions for RNA: ENSMUST00000036229.12

Ctdp1-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdp1, Length 3,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-201ENSMUST00000036229 Rhox8Q6VSS7 320 aa24.94■■□□□ 1.58
Ctdp1-201ENSMUST00000036229 Ehmt2Q9Z148 1263 aaKnown RBP24.9■■□□□ 1.58
Ctdp1-201ENSMUST00000036229 Rpgrip1Q9EPQ2 1331 aa24.69■■□□□ 1.54
Ctdp1-201ENSMUST00000036229 NischQ80TM9 1593 aa24.28■■□□□ 1.48
Ctdp1-201ENSMUST00000036229 Pcgf6Q99NA9 353 aa24.06■■□□□ 1.44
Ctdp1-201ENSMUST00000036229 Acin1Q9JIX8 1338 aaKnown RBP23.96■■□□□ 1.43
Ctdp1-201ENSMUST00000036229 Supt5hO55201 1082 aaKnown RBP23.48■■□□□ 1.35
Ctdp1-201ENSMUST00000036229 Gm35339A0A140LHH9 1649 aa23.48■■□□□ 1.35
Ctdp1-201ENSMUST00000036229 Zeb1Q64318 1117 aa23.41■■□□□ 1.34
Ctdp1-201ENSMUST00000036229 Abcc9P70170 1546 aa23.39■■□□□ 1.33
Ctdp1-201ENSMUST00000036229 Las1lA2BE28 776 aaKnown RBP23.32■■□□□ 1.32
Ctdp1-201ENSMUST00000036229 Neurod1Q60867 357 aa23.29■■□□□ 1.32
Ctdp1-201ENSMUST00000036229 Abcc8B2RUS7 1588 aa22.97■■□□□ 1.27
Ctdp1-201ENSMUST00000036229 Cngb1E1AZ71 1325 aa22.86■■□□□ 1.25
Ctdp1-201ENSMUST00000036229 Ccdc136Q3TVA9 1136 aa22.85■■□□□ 1.25
Ctdp1-201ENSMUST00000036229 Csrnp3P59055 597 aa22.77■■□□□ 1.23
Ctdp1-201ENSMUST00000036229 Gm38655A0A286YDK6 273 aa22.75■■□□□ 1.23
Ctdp1-201ENSMUST00000036229 Wdr66E9Q743 1299 aa22.75■■□□□ 1.23
Ctdp1-201ENSMUST00000036229 CenpbP27790 599 aa22.74■■□□□ 1.23
Ctdp1-201ENSMUST00000036229 Ccdc180J3QNE4 1664 aa22.74■■□□□ 1.23
Ctdp1-201ENSMUST00000036229 1700123L14RikQ3V2K7 440 aa22.7■■□□□ 1.22
Ctdp1-201ENSMUST00000036229 Ppargc1bQ8VHJ7 1014 aa22.67■■□□□ 1.22
Ctdp1-201ENSMUST00000036229 DiexfQ8BTT6 772 aaKnown RBP22.53■■□□□ 1.2
Ctdp1-201ENSMUST00000036229 Trim41Q5NCC3 630 aa22.47■■□□□ 1.19
Ctdp1-201ENSMUST00000036229 Sall2Q9QX96 1004 aa22.41■■□□□ 1.18
Ctdp1-201ENSMUST00000036229 Gab3Q8BSM5 595 aa22.39■■□□□ 1.17
Ctdp1-201ENSMUST00000036229 Rtl1Q7M732 1744 aa22.3■■□□□ 1.16
Ctdp1-201ENSMUST00000036229 HrcG5E8J6 738 aa22.22■■□□□ 1.15
Ctdp1-201ENSMUST00000036229 Cdk11bP24788 784 aaKnown RBP22.21■■□□□ 1.15
Ctdp1-201ENSMUST00000036229 Anks4bQ8K3X6 423 aa22.18■■□□□ 1.14
Ctdp1-201ENSMUST00000036229 Myt1Q8CFC2 1127 aa22.17■■□□□ 1.14
Ctdp1-201ENSMUST00000036229 Nop58Q6DFW4 536 aaKnown RBP22.13■■□□□ 1.13
Ctdp1-201ENSMUST00000036229 NefmP08553 848 aa22.08■■□□□ 1.13
Ctdp1-201ENSMUST00000036229 Dcaf1Q80TR8 1506 aa22.07■■□□□ 1.12
Ctdp1-201ENSMUST00000036229 Mier1Q5UAK0 511 aa22.01■■□□□ 1.11
Ctdp1-201ENSMUST00000036229 Bcl11aQ9QYE3 773 aa21.96■■□□□ 1.11
Ctdp1-201ENSMUST00000036229 Aplp2Q06335 707 aa21.9■■□□□ 1.1
Ctdp1-201ENSMUST00000036229 Mapk8ip2Q9ERE9 830 aa21.9■■□□□ 1.1
Ctdp1-201ENSMUST00000036229 UbtfP25976 765 aaKnown RBP21.88■■□□□ 1.09
Ctdp1-201ENSMUST00000036229 Ttbk1Q6PCN3 1308 aa21.85■■□□□ 1.09
Ctdp1-201ENSMUST00000036229 Aebp2Q9Z248 504 aaKnown RBP21.76■■□□□ 1.07
Ctdp1-201ENSMUST00000036229 Fam71e1A1L3C1 212 aa21.73■■□□□ 1.07
Ctdp1-201ENSMUST00000036229 PrkcshO08795 521 aa21.61■■□□□ 1.05
Ctdp1-201ENSMUST00000036229 SafbD3YXK2 937 aaKnown RBP21.6■■□□□ 1.05
Ctdp1-201ENSMUST00000036229 Amer1Q7TS75 1132 aa21.55■■□□□ 1.04
Ctdp1-201ENSMUST00000036229 Ifnlr1Q8CGK5 535 aa21.52■■□□□ 1.04
Ctdp1-201ENSMUST00000036229 Ap3b1Q9Z1T1 1105 aa21.51■■□□□ 1.03
Ctdp1-201ENSMUST00000036229 Zcchc6Q5BLK4 1491 aaKnown RBP21.5■■□□□ 1.03
Ctdp1-201ENSMUST00000036229 ScribQ80U72 1612 aa21.49■■□□□ 1.03
Ctdp1-201ENSMUST00000036229 ClspnQ80YR7 1315 aa21.46■■□□□ 1.03
Ctdp1-201ENSMUST00000036229 Slc24a1Q91WD8 1130 aa21.41■■□□□ 1.02
Ctdp1-201ENSMUST00000036229 Myt1lP97500 1187 aa21.35■■□□□ 1.01
Ctdp1-201ENSMUST00000036229 Hnrnpul2Q00PI9 745 aaKnown RBP21.33■■□□□ 1.01
Ctdp1-201ENSMUST00000036229 Rb1cc1Q9ESK9 1588 aa21.31■■□□□ 1
Ctdp1-201ENSMUST00000036229 Pelp1Q9DBD5 1123 aaKnown RBP21.28■■□□□ 1
Ctdp1-201ENSMUST00000036229 TonslQ6NZL6 1363 aa21.22■□□□□ 0.99
Ctdp1-201ENSMUST00000036229 Esf1Q3V1V3 845 aaKnown RBP21.2■□□□□ 0.99
Ctdp1-201ENSMUST00000036229 Chic1Q8CBW7 227 aa21.2■□□□□ 0.98
Ctdp1-201ENSMUST00000036229 Kdm5dQ62240 1548 aa21.16■□□□□ 0.98
Ctdp1-201ENSMUST00000036229 Tnnt3Q9QZ47 272 aa21.15■□□□□ 0.98
Ctdp1-201ENSMUST00000036229 Anp32aO35381 247 aa21.09■□□□□ 0.97
Ctdp1-201ENSMUST00000036229 Eid3Q3V124 375 aa21.05■□□□□ 0.96
Ctdp1-201ENSMUST00000036229 Eif5bQ05D44 1216 aaKnown RBP21.03■□□□□ 0.96
Ctdp1-201ENSMUST00000036229 Cep164Q5DU05 1446 aa21■□□□□ 0.95
Ctdp1-201ENSMUST00000036229 NacadQ5SWP3 1504 aa20.98■□□□□ 0.95
Ctdp1-201ENSMUST00000036229 Baz1aO88379 1555 aa20.93■□□□□ 0.94
Ctdp1-201ENSMUST00000036229 Plekhg3Q4VAC9 1341 aa20.81■□□□□ 0.92
Ctdp1-201ENSMUST00000036229 Npm2Q80W85 207 aa20.79■□□□□ 0.92
Ctdp1-201ENSMUST00000036229 Ppp4r2Q0VGB7 417 aa20.79■□□□□ 0.92
Ctdp1-201ENSMUST00000036229 4933416C03RikQ3V063 378 aa20.79■□□□□ 0.92
Ctdp1-201ENSMUST00000036229 Calr4Q3TQS0 420 aa20.78■□□□□ 0.92
Ctdp1-201ENSMUST00000036229 Stra8P70278 393 aa20.75■□□□□ 0.91
Ctdp1-201ENSMUST00000036229 NclP09405 707 aaKnown RBP20.74■□□□□ 0.91
Ctdp1-201ENSMUST00000036229 Nolc1E9Q5C9 702 aaKnown RBP20.74■□□□□ 0.91
Ctdp1-201ENSMUST00000036229 Rtl5Q5DTT4 599 aa20.72■□□□□ 0.91
Ctdp1-201ENSMUST00000036229 Hdac5Q9Z2V6 1113 aa20.65■□□□□ 0.9
Ctdp1-201ENSMUST00000036229 Ube2uB1AUC4 352 aa20.62■□□□□ 0.89
Ctdp1-201ENSMUST00000036229 Supt16hQ920B9 1047 aa20.56■□□□□ 0.88
Ctdp1-201ENSMUST00000036229 Rsf1E9PWW9 1441 aaKnown RBP20.55■□□□□ 0.88
Ctdp1-201ENSMUST00000036229 DaxxO35613 739 aa20.54■□□□□ 0.88
Ctdp1-201ENSMUST00000036229 P3h3Q8CG70 732 aa20.53■□□□□ 0.88
Ctdp1-201ENSMUST00000036229 Sycp2Q9CUU3 1500 aa20.5■□□□□ 0.87
Ctdp1-201ENSMUST00000036229 Il27Q8K3I6 234 aa20.5■□□□□ 0.87
Ctdp1-201ENSMUST00000036229 Wdr43Q6ZQL4 677 aaKnown RBP20.48■□□□□ 0.87
Ctdp1-201ENSMUST00000036229 Fam50aQ9WV03 339 aaKnown RBP20.47■□□□□ 0.87
Ctdp1-201ENSMUST00000036229 Slc4a3P16283 1227 aa20.45■□□□□ 0.86
Ctdp1-201ENSMUST00000036229 Plcd4Q8K3R3 807 aa20.4■□□□□ 0.86
Ctdp1-201ENSMUST00000036229 Brd4Q9ESU6 1400 aaKnown RBP20.4■□□□□ 0.86
Ctdp1-201ENSMUST00000036229 Smarca2Q6DIC0 1577 aa20.36■□□□□ 0.85
Ctdp1-201ENSMUST00000036229 Crybg2B7ZCC2 1516 aa20.33■□□□□ 0.85
Ctdp1-201ENSMUST00000036229 Gtf3c3Q3TMP1 882 aa20.3■□□□□ 0.84
Ctdp1-201ENSMUST00000036229 Upf2A2AT37 1269 aaKnown RBP20.29■□□□□ 0.84
Ctdp1-201ENSMUST00000036229 Pak3Q61036 559 aa20.26■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 Ccdc27Q3V036 639 aa20.25■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 Ccdc88bQ4QRL3 1481 aa20.25■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 Irx3P81067 507 aa20.24■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 Pknox2Q8BG99 474 aa20.24■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 Znf710Q3U288 666 aa20.23■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 NrdcQ8BHG1 1161 aa20.23■□□□□ 0.83
Ctdp1-201ENSMUST00000036229 Hsp90aa1P07901 733 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms