RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Rhox8Q6VSS7 320 aa17.18■□□□□ 0.34
Cspg4-201ENSMUST00000035661 NischQ80TM9 1593 aa16.64■□□□□ 0.25
Cspg4-201ENSMUST00000035661 Rpgrip1Q9EPQ2 1331 aa16.19■□□□□ 0.18
Cspg4-201ENSMUST00000035661 Cngb1E1AZ71 1325 aa16.02■□□□□ 0.16
Cspg4-201ENSMUST00000035661 Las1lA2BE28 776 aaKnown RBP15.91■□□□□ 0.14
Cspg4-201ENSMUST00000035661 Rtl1Q7M732 1744 aa15.81■□□□□ 0.12
Cspg4-201ENSMUST00000035661 Pelp1Q9DBD5 1123 aaKnown RBP15.74■□□□□ 0.11
Cspg4-201ENSMUST00000035661 Abcc9P70170 1546 aa15.68■□□□□ 0.1
Cspg4-201ENSMUST00000035661 Gm35339A0A140LHH9 1649 aa15.52■□□□□ 0.07
Cspg4-201ENSMUST00000035661 Trim41Q5NCC3 630 aa15.44■□□□□ 0.06
Cspg4-201ENSMUST00000035661 Ccdc180J3QNE4 1664 aa15.43■□□□□ 0.06
Cspg4-201ENSMUST00000035661 Ccdc136Q3TVA9 1136 aa15.41■□□□□ 0.06
Cspg4-201ENSMUST00000035661 Esf1Q3V1V3 845 aaKnown RBP15.39■□□□□ 0.05
Cspg4-201ENSMUST00000035661 Abcc8B2RUS7 1588 aa15.32■□□□□ 0.04
Cspg4-201ENSMUST00000035661 Ube2uB1AUC4 352 aa15.09■□□□□ 0.01
Cspg4-201ENSMUST00000035661 Amer1Q7TS75 1132 aa15.01□□□□□ -0.01
Cspg4-201ENSMUST00000035661 Wdr66E9Q743 1299 aa14.97□□□□□ -0.01
Cspg4-201ENSMUST00000035661 CenpbP27790 599 aa14.9□□□□□ -0.02
Cspg4-201ENSMUST00000035661 Npm2Q80W85 207 aa14.9□□□□□ -0.02
Cspg4-201ENSMUST00000035661 Zcchc6Q5BLK4 1491 aaKnown RBP14.9□□□□□ -0.02
Cspg4-201ENSMUST00000035661 Zeb1Q64318 1117 aa14.87□□□□□ -0.03
Cspg4-201ENSMUST00000035661 Myt1Q8CFC2 1127 aa14.86□□□□□ -0.03
Cspg4-201ENSMUST00000035661 4930567H17RikQ3V0K5 233 aa14.84□□□□□ -0.03
Cspg4-201ENSMUST00000035661 Gab3Q8BSM5 595 aa14.77□□□□□ -0.04
Cspg4-201ENSMUST00000035661 HrcG5E8J6 738 aa14.77□□□□□ -0.05
Cspg4-201ENSMUST00000035661 Ehmt2Q9Z148 1263 aaKnown RBP14.73□□□□□ -0.05
Cspg4-201ENSMUST00000035661 Rb1cc1Q9ESK9 1588 aa14.69□□□□□ -0.06
Cspg4-201ENSMUST00000035661 Stra8P70278 393 aa14.66□□□□□ -0.06
Cspg4-201ENSMUST00000035661 Myt1lP97500 1187 aa14.63□□□□□ -0.07
Cspg4-201ENSMUST00000035661 NacadQ5SWP3 1504 aa14.54□□□□□ -0.08
Cspg4-201ENSMUST00000035661 Brd4Q9ESU6 1400 aaKnown RBP14.44□□□□□ -0.1
Cspg4-201ENSMUST00000035661 NefmP08553 848 aa14.39□□□□□ -0.11
Cspg4-201ENSMUST00000035661 Dcaf1Q80TR8 1506 aa14.39□□□□□ -0.11
Cspg4-201ENSMUST00000035661 Baz1aO88379 1555 aa14.37□□□□□ -0.11
Cspg4-201ENSMUST00000035661 Il27Q8K3I6 234 aa14.35□□□□□ -0.11
Cspg4-201ENSMUST00000035661 Acin1Q9JIX8 1338 aaKnown RBP14.35□□□□□ -0.11
Cspg4-201ENSMUST00000035661 UbtfP25976 765 aaKnown RBP14.24□□□□□ -0.13
Cspg4-201ENSMUST00000035661 4933416C03RikQ3V063 378 aa14.24□□□□□ -0.13
Cspg4-201ENSMUST00000035661 Rtl5Q5DTT4 599 aa14.24□□□□□ -0.13
Cspg4-201ENSMUST00000035661 Kdm5dQ62240 1548 aa14.22□□□□□ -0.13
Cspg4-201ENSMUST00000035661 Tnnt3Q9QZ47 272 aa14.19□□□□□ -0.14
Cspg4-201ENSMUST00000035661 Ttbk1Q6PCN3 1308 aa14.18□□□□□ -0.14
Cspg4-201ENSMUST00000035661 Npm1Q61937 292 aaKnown RBP14.16□□□□□ -0.14
Cspg4-201ENSMUST00000035661 Cdk11bP24788 784 aaKnown RBP14.08□□□□□ -0.15
Cspg4-201ENSMUST00000035661 Cep164Q5DU05 1446 aa14.04□□□□□ -0.16
Cspg4-201ENSMUST00000035661 NeflP08551 543 aa14.02□□□□□ -0.16
Cspg4-201ENSMUST00000035661 Slc24a1Q91WD8 1130 aa14.01□□□□□ -0.17
Cspg4-201ENSMUST00000035661 Crybg2B7ZCC2 1516 aa13.96□□□□□ -0.18
Cspg4-201ENSMUST00000035661 DiexfQ8BTT6 772 aaKnown RBP13.95□□□□□ -0.18
Cspg4-201ENSMUST00000035661 Ercc6F8VPZ5 1481 aa13.93□□□□□ -0.18
Cspg4-201ENSMUST00000035661 Anp32bQ9EST5 272 aaKnown RBP13.93□□□□□ -0.18
Cspg4-201ENSMUST00000035661 Os9Q8K2C7 672 aa13.92□□□□□ -0.18
Cspg4-201ENSMUST00000035661 Fam50aQ9WV03 339 aaKnown RBP13.92□□□□□ -0.18
Cspg4-201ENSMUST00000035661 Ap3b1Q9Z1T1 1105 aa13.91□□□□□ -0.18
Cspg4-201ENSMUST00000035661 ScribQ80U72 1612 aa13.89□□□□□ -0.19
Cspg4-201ENSMUST00000035661 Sycp2Q9CUU3 1500 aa13.87□□□□□ -0.19
Cspg4-201ENSMUST00000035661 NrdcQ8BHG1 1161 aa13.87□□□□□ -0.19
Cspg4-201ENSMUST00000035661 Ubl4bQ9CQ84 188 aa13.85□□□□□ -0.19
Cspg4-201ENSMUST00000035661 NclP09405 707 aaKnown RBP13.83□□□□□ -0.19
Cspg4-201ENSMUST00000035661 Golga3P55937 1487 aa13.83□□□□□ -0.2
Cspg4-201ENSMUST00000035661 Pcgf6Q99NA9 353 aa13.83□□□□□ -0.2
Cspg4-201ENSMUST00000035661 Nop58Q6DFW4 536 aaKnown RBP13.81□□□□□ -0.2
Cspg4-201ENSMUST00000035661 Rsf1E9PWW9 1441 aaKnown RBP13.79□□□□□ -0.2
Cspg4-201ENSMUST00000035661 Pds5bQ4VA53 1446 aaKnown RBP13.78□□□□□ -0.2
Cspg4-201ENSMUST00000035661 Ccdc18Q640L5 1455 aa13.76□□□□□ -0.21
Cspg4-201ENSMUST00000035661 TonslQ6NZL6 1363 aa13.74□□□□□ -0.21
Cspg4-201ENSMUST00000035661 Clip1Q922J3 1391 aa13.71□□□□□ -0.21
Cspg4-201ENSMUST00000035661 Hdac5Q9Z2V6 1113 aa13.7□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Smarca2Q6DIC0 1577 aa13.69□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Gm13697A2AK42 830 aa13.69□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Chic1Q8CBW7 227 aa13.68□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Kif15Q6P9L6 1387 aa13.66□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Mier1Q5UAK0 511 aa13.66□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Ythdc1E9Q5K9 736 aaKnown RBP13.65□□□□□ -0.22
Cspg4-201ENSMUST00000035661 Plekhg3Q4VAC9 1341 aa13.64□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Cttnbp2B9EJA2 1648 aa13.62□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Neurod1Q60867 357 aa13.61□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Plppr3Q7TPB0 716 aa13.6□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Ccer2J3QPU5 274 aa13.6□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Lmod2Q3UHZ5 550 aa13.59□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Smarca4Q3TKT4 1613 aaKnown RBP13.59□□□□□ -0.23
Cspg4-201ENSMUST00000035661 Anp32aO35381 247 aa13.58□□□□□ -0.24
Cspg4-201ENSMUST00000035661 Eif5bQ05D44 1216 aaKnown RBP13.57□□□□□ -0.24
Cspg4-201ENSMUST00000035661 DaxxO35613 739 aa13.56□□□□□ -0.24
Cspg4-201ENSMUST00000035661 Fmn1Q05860 1466 aa13.55□□□□□ -0.24
Cspg4-201ENSMUST00000035661 Setd5Q5XJV7 1441 aa13.47□□□□□ -0.25
Cspg4-201ENSMUST00000035661 Ifnlr1Q8CGK5 535 aa13.47□□□□□ -0.25
Cspg4-201ENSMUST00000035661 Ccdc9Q8VC31 543 aaKnown RBP13.47□□□□□ -0.25
Cspg4-201ENSMUST00000035661 Eea1Q8BL66 1411 aa13.46□□□□□ -0.25
Cspg4-201ENSMUST00000035661 Atad2bE9Q166 1460 aaKnown RBP13.46□□□□□ -0.25
Cspg4-201ENSMUST00000035661 BlmO88700 1416 aa13.45□□□□□ -0.26
Cspg4-201ENSMUST00000035661 CftrP26361 1476 aa13.45□□□□□ -0.26
Cspg4-201ENSMUST00000035661 Synj1Q8CHC4 1574 aa13.45□□□□□ -0.26
Cspg4-201ENSMUST00000035661 Zbtb7cQ8VCZ7 619 aa13.44□□□□□ -0.26
Cspg4-201ENSMUST00000035661 Hnrnpul2Q00PI9 745 aaKnown RBP13.43□□□□□ -0.26
Cspg4-201ENSMUST00000035661 Atp1b4Q99ME6 356 aa13.42□□□□□ -0.26
Cspg4-201ENSMUST00000035661 ClspnQ80YR7 1315 aa13.42□□□□□ -0.26
Cspg4-201ENSMUST00000035661 Gm13695A2AK44 830 aa13.39□□□□□ -0.27
Cspg4-201ENSMUST00000035661 CatipB9EKE5 520 aa13.39□□□□□ -0.27
Cspg4-201ENSMUST00000035661 Clstn2Q9ER65 966 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms