RNA–Protein interactions for RNA: ENSMUST00000034388.9

Vps4a-201, Transcript of Vacuolar protein sorting-associated protein 4A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4a, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4a-201ENSMUST00000034388 Gm35339A0A140LHH9 1649 aa32.75■■■□□ 2.83
Vps4a-201ENSMUST00000034388 NischQ80TM9 1593 aa32.65■■■□□ 2.82
Vps4a-201ENSMUST00000034388 Abcc9P70170 1546 aa31.8■■■□□ 2.68
Vps4a-201ENSMUST00000034388 Abcc8B2RUS7 1588 aa31.37■■■□□ 2.61
Vps4a-201ENSMUST00000034388 Rtl1Q7M732 1744 aa31■■■□□ 2.55
Vps4a-201ENSMUST00000034388 Rhox8Q6VSS7 320 aa30.51■■■□□ 2.48
Vps4a-201ENSMUST00000034388 Ccdc180J3QNE4 1664 aa30.46■■■□□ 2.47
Vps4a-201ENSMUST00000034388 ScribQ80U72 1612 aa29.92■■■□□ 2.38
Vps4a-201ENSMUST00000034388 Rpgrip1Q9EPQ2 1331 aa29.82■■■□□ 2.36
Vps4a-201ENSMUST00000034388 Zcchc6Q5BLK4 1491 aaKnown RBP29.57■■■□□ 2.32
Vps4a-201ENSMUST00000034388 Dcaf1Q80TR8 1506 aa29.13■■■□□ 2.25
Vps4a-201ENSMUST00000034388 NacadQ5SWP3 1504 aa29.11■■■□□ 2.25
Vps4a-201ENSMUST00000034388 Kdm5dQ62240 1548 aa29.09■■■□□ 2.25
Vps4a-201ENSMUST00000034388 Acin1Q9JIX8 1338 aaKnown RBP28.94■■■□□ 2.22
Vps4a-201ENSMUST00000034388 HrcG5E8J6 738 aa28.94■■■□□ 2.22
Vps4a-201ENSMUST00000034388 Rb1cc1Q9ESK9 1588 aa28.63■■■□□ 2.17
Vps4a-201ENSMUST00000034388 Sycp2Q9CUU3 1500 aa28.5■■■□□ 2.15
Vps4a-201ENSMUST00000034388 Baz1aO88379 1555 aa28.39■■■□□ 2.14
Vps4a-201ENSMUST00000034388 Ccdc136Q3TVA9 1136 aa28.19■■■□□ 2.1
Vps4a-201ENSMUST00000034388 Ehmt2Q9Z148 1263 aaKnown RBP28.07■■■□□ 2.08
Vps4a-201ENSMUST00000034388 BicraF8VPZ9 1578 aa28■■■□□ 2.07
Vps4a-201ENSMUST00000034388 Trim41Q5NCC3 630 aa27.96■■■□□ 2.07
Vps4a-201ENSMUST00000034388 Crybg2B7ZCC2 1516 aa27.92■■■□□ 2.06
Vps4a-201ENSMUST00000034388 Pcgf6Q99NA9 353 aa27.9■■■□□ 2.06
Vps4a-201ENSMUST00000034388 Cep164Q5DU05 1446 aa27.88■■■□□ 2.05
Vps4a-201ENSMUST00000034388 Smarca2Q6DIC0 1577 aa27.8■■■□□ 2.04
Vps4a-201ENSMUST00000034388 Supt5hO55201 1082 aaKnown RBP27.23■■□□□ 1.95
Vps4a-201ENSMUST00000034388 Rsf1E9PWW9 1441 aaKnown RBP27.19■■□□□ 1.94
Vps4a-201ENSMUST00000034388 Pds5bQ4VA53 1446 aaKnown RBP27.18■■□□□ 1.94
Vps4a-201ENSMUST00000034388 Brd4Q9ESU6 1400 aaKnown RBP27.18■■□□□ 1.94
Vps4a-201ENSMUST00000034388 NefmP08553 848 aa27.08■■□□□ 1.93
Vps4a-201ENSMUST00000034388 Cecr2E9Q2Z1 1453 aa27.04■■□□□ 1.92
Vps4a-201ENSMUST00000034388 Chic1Q8CBW7 227 aa27.04■■□□□ 1.92
Vps4a-201ENSMUST00000034388 Golga3P55937 1487 aa27.02■■□□□ 1.92
Vps4a-201ENSMUST00000034388 Atad2bE9Q166 1460 aaKnown RBP27.01■■□□□ 1.91
Vps4a-201ENSMUST00000034388 Cngb1E1AZ71 1325 aa26.96■■□□□ 1.91
Vps4a-201ENSMUST00000034388 Smarca4Q3TKT4 1613 aaKnown RBP26.96■■□□□ 1.91
Vps4a-201ENSMUST00000034388 Ccdc88bQ4QRL3 1481 aa26.91■■□□□ 1.9
Vps4a-201ENSMUST00000034388 Gab3Q8BSM5 595 aa26.82■■□□□ 1.88
Vps4a-201ENSMUST00000034388 Synj1Q8CHC4 1574 aa26.78■■□□□ 1.88
Vps4a-201ENSMUST00000034388 Mier1Q5UAK0 511 aa26.77■■□□□ 1.88
Vps4a-201ENSMUST00000034388 Iqgap2Q3UQ44 1575 aa26.75■■□□□ 1.87
Vps4a-201ENSMUST00000034388 Neurod1Q60867 357 aa26.74■■□□□ 1.87
Vps4a-201ENSMUST00000034388 Thoc2B1AZI6 1594 aaKnown RBP26.71■■□□□ 1.87
Vps4a-201ENSMUST00000034388 Top2bQ64511 1612 aa26.67■■□□□ 1.86
Vps4a-201ENSMUST00000034388 Zeb1Q64318 1117 aa26.67■■□□□ 1.86
Vps4a-201ENSMUST00000034388 Ercc6F8VPZ5 1481 aa26.63■■□□□ 1.85
Vps4a-201ENSMUST00000034388 CftrP26361 1476 aa26.61■■□□□ 1.85
Vps4a-201ENSMUST00000034388 Dnajc5bQ9CQ94 199 aa26.57■■□□□ 1.84
Vps4a-201ENSMUST00000034388 Las1lA2BE28 776 aaKnown RBP26.56■■□□□ 1.84
Vps4a-201ENSMUST00000034388 Cttnbp2B9EJA2 1648 aa26.48■■□□□ 1.83
Vps4a-201ENSMUST00000034388 Sall2Q9QX96 1004 aa26.47■■□□□ 1.83
Vps4a-201ENSMUST00000034388 Wdr62Q3U3T8 1523 aa26.44■■□□□ 1.82
Vps4a-201ENSMUST00000034388 Frmpd1A2AKB4 1549 aa26.41■■□□□ 1.82
Vps4a-201ENSMUST00000034388 Rapgef2Q8CHG7 1496 aa26.4■■□□□ 1.82
Vps4a-201ENSMUST00000034388 Esf1Q3V1V3 845 aaKnown RBP26.38■■□□□ 1.81
Vps4a-201ENSMUST00000034388 Cc2d2aQ8CFW7 1633 aa26.33■■□□□ 1.81
Vps4a-201ENSMUST00000034388 Anks4bQ8K3X6 423 aa26.31■■□□□ 1.8
Vps4a-201ENSMUST00000034388 Fmn1Q05860 1466 aa26.25■■□□□ 1.79
Vps4a-201ENSMUST00000034388 Fam135aQ6NS59 1506 aa26.22■■□□□ 1.79
Vps4a-201ENSMUST00000034388 Top2aQ01320 1528 aaKnown RBP26.21■■□□□ 1.79
Vps4a-201ENSMUST00000034388 Phldb1Q6PDH0 1371 aaKnown RBP26.19■■□□□ 1.78
Vps4a-201ENSMUST00000034388 UbtfP25976 765 aaKnown RBP26.11■■□□□ 1.77
Vps4a-201ENSMUST00000034388 Cep162Q6ZQ06 1403 aa26.11■■□□□ 1.77
Vps4a-201ENSMUST00000034388 ClspnQ80YR7 1315 aa26.08■■□□□ 1.77
Vps4a-201ENSMUST00000034388 Unc13aQ4KUS2 1712 aa25.99■■□□□ 1.75
Vps4a-201ENSMUST00000034388 Wdr66E9Q743 1299 aa25.98■■□□□ 1.75
Vps4a-201ENSMUST00000034388 Aebp2Q9Z248 504 aaKnown RBP25.98■■□□□ 1.75
Vps4a-201ENSMUST00000034388 Ubl4bQ9CQ84 188 aa25.97■■□□□ 1.75
Vps4a-201ENSMUST00000034388 Baz1bQ9Z277 1479 aa25.94■■□□□ 1.74
Vps4a-201ENSMUST00000034388 Cdk11bP24788 784 aaKnown RBP25.93■■□□□ 1.74
Vps4a-201ENSMUST00000034388 Eif4g1Q6NZJ6 1600 aaKnown RBP25.9■■□□□ 1.74
Vps4a-201ENSMUST00000034388 1700123L14RikQ3V2K7 440 aa25.88■■□□□ 1.73
Vps4a-201ENSMUST00000034388 Nop58Q6DFW4 536 aaKnown RBP25.86■■□□□ 1.73
Vps4a-201ENSMUST00000034388 TonslQ6NZL6 1363 aa25.85■■□□□ 1.73
Vps4a-201ENSMUST00000034388 Csrnp3P59055 597 aa25.81■■□□□ 1.72
Vps4a-201ENSMUST00000034388 Clip1Q922J3 1391 aa25.77■■□□□ 1.72
Vps4a-201ENSMUST00000034388 Ncapd3Q6ZQK0 1506 aa25.77■■□□□ 1.72
Vps4a-201ENSMUST00000034388 Aplp2Q06335 707 aa25.77■■□□□ 1.72
Vps4a-201ENSMUST00000034388 Myt1lP97500 1187 aa25.75■■□□□ 1.71
Vps4a-201ENSMUST00000034388 Kif15Q6P9L6 1387 aa25.68■■□□□ 1.7
Vps4a-201ENSMUST00000034388 Npm2Q80W85 207 aa25.68■■□□□ 1.7
Vps4a-201ENSMUST00000034388 TnnQ80Z71 1560 aa25.66■■□□□ 1.7
Vps4a-201ENSMUST00000034388 Mrc2Q64449 1479 aa25.65■■□□□ 1.7
Vps4a-201ENSMUST00000034388 Lamc3Q9R0B6 1581 aa25.62■■□□□ 1.69
Vps4a-201ENSMUST00000034388 Myt1Q8CFC2 1127 aa25.61■■□□□ 1.69
Vps4a-201ENSMUST00000034388 Cux2P70298 1426 aa25.54■■□□□ 1.68
Vps4a-201ENSMUST00000034388 Arhgap35Q91YM2 1499 aa25.53■■□□□ 1.68
Vps4a-201ENSMUST00000034388 Plekhg3Q4VAC9 1341 aa25.52■■□□□ 1.68
Vps4a-201ENSMUST00000034388 NrkQ9R0G8 1455 aa25.51■■□□□ 1.67
Vps4a-201ENSMUST00000034388 CenpbP27790 599 aa25.49■■□□□ 1.67
Vps4a-201ENSMUST00000034388 Eea1Q8BL66 1411 aa25.49■■□□□ 1.67
Vps4a-201ENSMUST00000034388 Ccdc18Q640L5 1455 aa25.48■■□□□ 1.67
Vps4a-201ENSMUST00000034388 Kdm5bQ80Y84 1544 aa25.45■■□□□ 1.66
Vps4a-201ENSMUST00000034388 Arap1Q4LDD4 1452 aa25.41■■□□□ 1.66
Vps4a-201ENSMUST00000034388 Arhgef5E9Q7D5 1581 aa25.4■■□□□ 1.66
Vps4a-201ENSMUST00000034388 Map3k1P53349 1493 aa25.38■■□□□ 1.65
Vps4a-201ENSMUST00000034388 Npm1Q61937 292 aaKnown RBP25.36■■□□□ 1.65
Vps4a-201ENSMUST00000034388 TchhA0A0B4J1F9 1599 aa25.35■■□□□ 1.65
Vps4a-201ENSMUST00000034388 Ppargc1bQ8VHJ7 1014 aa25.34■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms