RNA–Protein interactions for RNA: ENSMUST00000032279.11

Erc1-201, Transcript of ELKS/Rab6-interacting/CAST family member 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Erc1, Length 8,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Erc1-201ENSMUST00000032279 Rpgrip1Q9EPQ2 1331 aa14.16□□□□□ -0.14
Erc1-201ENSMUST00000032279 Rhox8Q6VSS7 320 aa13.86□□□□□ -0.19
Erc1-201ENSMUST00000032279 Rtl1Q7M732 1744 aa13.47□□□□□ -0.25
Erc1-201ENSMUST00000032279 Las1lA2BE28 776 aaKnown RBP13.27□□□□□ -0.28
Erc1-201ENSMUST00000032279 Ccdc180J3QNE4 1664 aa13.22□□□□□ -0.29
Erc1-201ENSMUST00000032279 Cngb1E1AZ71 1325 aa13.21□□□□□ -0.3
Erc1-201ENSMUST00000032279 NischQ80TM9 1593 aa13.18□□□□□ -0.3
Erc1-201ENSMUST00000032279 Acin1Q9JIX8 1338 aaKnown RBP12.88□□□□□ -0.35
Erc1-201ENSMUST00000032279 Myt1Q8CFC2 1127 aa12.72□□□□□ -0.37
Erc1-201ENSMUST00000032279 Pelp1Q9DBD5 1123 aaKnown RBP12.72□□□□□ -0.37
Erc1-201ENSMUST00000032279 HrcG5E8J6 738 aa12.59□□□□□ -0.39
Erc1-201ENSMUST00000032279 NefmP08553 848 aa12.57□□□□□ -0.4
Erc1-201ENSMUST00000032279 Abcc9P70170 1546 aa12.53□□□□□ -0.4
Erc1-201ENSMUST00000032279 Trim41Q5NCC3 630 aa12.53□□□□□ -0.4
Erc1-201ENSMUST00000032279 CenpbP27790 599 aa12.5□□□□□ -0.41
Erc1-201ENSMUST00000032279 Ehmt2Q9Z148 1263 aaKnown RBP12.48□□□□□ -0.41
Erc1-201ENSMUST00000032279 Wdr66E9Q743 1299 aa12.37□□□□□ -0.43
Erc1-201ENSMUST00000032279 Stra8P70278 393 aa12.33□□□□□ -0.44
Erc1-201ENSMUST00000032279 Pcgf6Q99NA9 353 aa12.33□□□□□ -0.44
Erc1-201ENSMUST00000032279 Ccdc136Q3TVA9 1136 aa12.32□□□□□ -0.44
Erc1-201ENSMUST00000032279 Zeb1Q64318 1117 aa12.32□□□□□ -0.44
Erc1-201ENSMUST00000032279 Gm35339A0A140LHH9 1649 aa12.2□□□□□ -0.46
Erc1-201ENSMUST00000032279 Dcaf1Q80TR8 1506 aa12.19□□□□□ -0.46
Erc1-201ENSMUST00000032279 Tnnt3Q9QZ47 272 aa12.17□□□□□ -0.46
Erc1-201ENSMUST00000032279 Cdk11bP24788 784 aaKnown RBP12.11□□□□□ -0.47
Erc1-201ENSMUST00000032279 Esf1Q3V1V3 845 aaKnown RBP12.11□□□□□ -0.47
Erc1-201ENSMUST00000032279 Rtl5Q5DTT4 599 aa12.11□□□□□ -0.47
Erc1-201ENSMUST00000032279 Abcc8B2RUS7 1588 aa12.07□□□□□ -0.48
Erc1-201ENSMUST00000032279 Gab3Q8BSM5 595 aa12□□□□□ -0.49
Erc1-201ENSMUST00000032279 Nop58Q6DFW4 536 aaKnown RBP11.93□□□□□ -0.5
Erc1-201ENSMUST00000032279 Npm2Q80W85 207 aa11.93□□□□□ -0.5
Erc1-201ENSMUST00000032279 Supt5hO55201 1082 aaKnown RBP11.9□□□□□ -0.5
Erc1-201ENSMUST00000032279 Neurod1Q60867 357 aa11.89□□□□□ -0.51
Erc1-201ENSMUST00000032279 Cep164Q5DU05 1446 aa11.82□□□□□ -0.52
Erc1-201ENSMUST00000032279 UbtfP25976 765 aaKnown RBP11.82□□□□□ -0.52
Erc1-201ENSMUST00000032279 Anks4bQ8K3X6 423 aa11.81□□□□□ -0.52
Erc1-201ENSMUST00000032279 ClspnQ80YR7 1315 aa11.8□□□□□ -0.52
Erc1-201ENSMUST00000032279 Ube2uB1AUC4 352 aa11.78□□□□□ -0.52
Erc1-201ENSMUST00000032279 Amer1Q7TS75 1132 aa11.77□□□□□ -0.53
Erc1-201ENSMUST00000032279 Aplp2Q06335 707 aa11.77□□□□□ -0.53
Erc1-201ENSMUST00000032279 TonslQ6NZL6 1363 aa11.76□□□□□ -0.53
Erc1-201ENSMUST00000032279 Myt1lP97500 1187 aa11.76□□□□□ -0.53
Erc1-201ENSMUST00000032279 Zcchc6Q5BLK4 1491 aaKnown RBP11.74□□□□□ -0.53
Erc1-201ENSMUST00000032279 DiexfQ8BTT6 772 aaKnown RBP11.71□□□□□ -0.54
Erc1-201ENSMUST00000032279 Mier1Q5UAK0 511 aa11.68□□□□□ -0.54
Erc1-201ENSMUST00000032279 Anp32aO35381 247 aa11.67□□□□□ -0.54
Erc1-201ENSMUST00000032279 Rb1cc1Q9ESK9 1588 aa11.66□□□□□ -0.54
Erc1-201ENSMUST00000032279 Brd4Q9ESU6 1400 aaKnown RBP11.61□□□□□ -0.55
Erc1-201ENSMUST00000032279 NrdcQ8BHG1 1161 aa11.6□□□□□ -0.55
Erc1-201ENSMUST00000032279 Anp32bQ9EST5 272 aaKnown RBP11.6□□□□□ -0.55
Erc1-201ENSMUST00000032279 NeflP08551 543 aa11.56□□□□□ -0.56
Erc1-201ENSMUST00000032279 Ccdc9Q8VC31 543 aaKnown RBP11.56□□□□□ -0.56
Erc1-201ENSMUST00000032279 NclP09405 707 aaKnown RBP11.53□□□□□ -0.56
Erc1-201ENSMUST00000032279 Baz1aO88379 1555 aa11.49□□□□□ -0.57
Erc1-201ENSMUST00000032279 4933416C03RikQ3V063 378 aa11.48□□□□□ -0.57
Erc1-201ENSMUST00000032279 4930567H17RikQ3V0K5 233 aa11.46□□□□□ -0.57
Erc1-201ENSMUST00000032279 Ccer2J3QPU5 274 aa11.45□□□□□ -0.58
Erc1-201ENSMUST00000032279 Sall2Q9QX96 1004 aa11.44□□□□□ -0.58
Erc1-201ENSMUST00000032279 Slc24a1Q91WD8 1130 aa11.41□□□□□ -0.58
Erc1-201ENSMUST00000032279 Csrnp3P59055 597 aa11.41□□□□□ -0.58
Erc1-201ENSMUST00000032279 Fam50aQ9WV03 339 aaKnown RBP11.34□□□□□ -0.59
Erc1-201ENSMUST00000032279 Ttbk1Q6PCN3 1308 aa11.33□□□□□ -0.6
Erc1-201ENSMUST00000032279 NacadQ5SWP3 1504 aa11.3□□□□□ -0.6
Erc1-201ENSMUST00000032279 1700123L14RikQ3V2K7 440 aa11.29□□□□□ -0.6
Erc1-201ENSMUST00000032279 Upf2A2AT37 1269 aaKnown RBP11.28□□□□□ -0.6
Erc1-201ENSMUST00000032279 Clip1Q922J3 1391 aa11.28□□□□□ -0.6
Erc1-201ENSMUST00000032279 Eif5bQ05D44 1216 aaKnown RBP11.26□□□□□ -0.61
Erc1-201ENSMUST00000032279 Golga3P55937 1487 aa11.26□□□□□ -0.61
Erc1-201ENSMUST00000032279 Calr4Q3TQS0 420 aa11.25□□□□□ -0.61
Erc1-201ENSMUST00000032279 Hdac5Q9Z2V6 1113 aa11.23□□□□□ -0.61
Erc1-201ENSMUST00000032279 Crybg2B7ZCC2 1516 aa11.19□□□□□ -0.62
Erc1-201ENSMUST00000032279 Wdr43Q6ZQL4 677 aaKnown RBP11.17□□□□□ -0.62
Erc1-201ENSMUST00000032279 Hsp90aa1P07901 733 aaKnown RBP11.15□□□□□ -0.62
Erc1-201ENSMUST00000032279 DaxxO35613 739 aa11.15□□□□□ -0.62
Erc1-201ENSMUST00000032279 Chic1Q8CBW7 227 aa11.14□□□□□ -0.63
Erc1-201ENSMUST00000032279 Plekhg3Q4VAC9 1341 aa11.14□□□□□ -0.63
Erc1-201ENSMUST00000032279 Ap3b1Q9Z1T1 1105 aa11.14□□□□□ -0.63
Erc1-201ENSMUST00000032279 Ppargc1bQ8VHJ7 1014 aa11.13□□□□□ -0.63
Erc1-201ENSMUST00000032279 Il27Q8K3I6 234 aa11.11□□□□□ -0.63
Erc1-201ENSMUST00000032279 Ccdc27Q3V036 639 aa11.1□□□□□ -0.63
Erc1-201ENSMUST00000032279 Eea1Q8BL66 1411 aa11.07□□□□□ -0.64
Erc1-201ENSMUST00000032279 Ppp4r2Q0VGB7 417 aa11.07□□□□□ -0.64
Erc1-201ENSMUST00000032279 Fam71e1A1L3C1 212 aa11.05□□□□□ -0.64
Erc1-201ENSMUST00000032279 Bcl11aQ9QYE3 773 aa11.04□□□□□ -0.64
Erc1-201ENSMUST00000032279 Kdm5dQ62240 1548 aa11.03□□□□□ -0.64
Erc1-201ENSMUST00000032279 Rsf1E9PWW9 1441 aaKnown RBP11.03□□□□□ -0.64
Erc1-201ENSMUST00000032279 Mia2Q91ZV0 1396 aa11.03□□□□□ -0.64
Erc1-201ENSMUST00000032279 Smarca2Q6DIC0 1577 aa10.99□□□□□ -0.65
Erc1-201ENSMUST00000032279 Aebp2Q9Z248 504 aaKnown RBP10.98□□□□□ -0.65
Erc1-201ENSMUST00000032279 Fmn1Q05860 1466 aa10.96□□□□□ -0.66
Erc1-201ENSMUST00000032279 Setd5Q5XJV7 1441 aa10.95□□□□□ -0.66
Erc1-201ENSMUST00000032279 Gm13697A2AK42 830 aa10.95□□□□□ -0.66
Erc1-201ENSMUST00000032279 Npm1Q61937 292 aaKnown RBP10.95□□□□□ -0.66
Erc1-201ENSMUST00000032279 BlmO88700 1416 aa10.95□□□□□ -0.66
Erc1-201ENSMUST00000032279 Gm38655A0A286YDK6 273 aa10.95□□□□□ -0.66
Erc1-201ENSMUST00000032279 Mbd3Q9Z2D8 285 aaKnown RBP10.94□□□□□ -0.66
Erc1-201ENSMUST00000032279 Eid3Q3V124 375 aa10.93□□□□□ -0.66
Erc1-201ENSMUST00000032279 Cwc22Q8C5N3 908 aaKnown RBP10.93□□□□□ -0.66
Erc1-201ENSMUST00000032279 Htatsf1Q8BGC0 757 aa10.92□□□□□ -0.66
Erc1-201ENSMUST00000032279 Os9Q8K2C7 672 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms