RNA–Protein interactions for RNA: ENSMUST00000028522.9

Itga6-201, Transcript of Integrin alpha-6, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Itga6, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Itga6-201ENSMUST00000028522 Rhox8Q6VSS7 320 aa29.48■■■□□ 2.31
Itga6-201ENSMUST00000028522 NischQ80TM9 1593 aa27.96■■■□□ 2.07
Itga6-201ENSMUST00000028522 Ccdc136Q3TVA9 1136 aa26.76■■□□□ 1.87
Itga6-201ENSMUST00000028522 Ehmt2Q9Z148 1263 aaKnown RBP26.62■■□□□ 1.85
Itga6-201ENSMUST00000028522 Abcc9P70170 1546 aa26.45■■□□□ 1.82
Itga6-201ENSMUST00000028522 Rpgrip1Q9EPQ2 1331 aa26.25■■□□□ 1.79
Itga6-201ENSMUST00000028522 Cngb1E1AZ71 1325 aa25.96■■□□□ 1.75
Itga6-201ENSMUST00000028522 Abcc8B2RUS7 1588 aa25.93■■□□□ 1.74
Itga6-201ENSMUST00000028522 Trim41Q5NCC3 630 aa25.92■■□□□ 1.74
Itga6-201ENSMUST00000028522 Esf1Q3V1V3 845 aaKnown RBP25.82■■□□□ 1.72
Itga6-201ENSMUST00000028522 Gab3Q8BSM5 595 aa25.79■■□□□ 1.72
Itga6-201ENSMUST00000028522 Ccdc180J3QNE4 1664 aa25.61■■□□□ 1.69
Itga6-201ENSMUST00000028522 Rtl1Q7M732 1744 aa25.44■■□□□ 1.66
Itga6-201ENSMUST00000028522 Gm35339A0A140LHH9 1649 aa25.4■■□□□ 1.66
Itga6-201ENSMUST00000028522 HrcG5E8J6 738 aa25.34■■□□□ 1.65
Itga6-201ENSMUST00000028522 Acin1Q9JIX8 1338 aaKnown RBP25.28■■□□□ 1.64
Itga6-201ENSMUST00000028522 Zcchc6Q5BLK4 1491 aaKnown RBP25.2■■□□□ 1.63
Itga6-201ENSMUST00000028522 Zeb1Q64318 1117 aa25.16■■□□□ 1.62
Itga6-201ENSMUST00000028522 Myt1lP97500 1187 aa25.11■■□□□ 1.61
Itga6-201ENSMUST00000028522 Npm2Q80W85 207 aa25.07■■□□□ 1.6
Itga6-201ENSMUST00000028522 Wdr66E9Q743 1299 aa24.93■■□□□ 1.58
Itga6-201ENSMUST00000028522 Las1lA2BE28 776 aaKnown RBP24.84■■□□□ 1.57
Itga6-201ENSMUST00000028522 UbtfP25976 765 aaKnown RBP24.75■■□□□ 1.55
Itga6-201ENSMUST00000028522 NefmP08553 848 aa24.54■■□□□ 1.52
Itga6-201ENSMUST00000028522 Rb1cc1Q9ESK9 1588 aa24.53■■□□□ 1.52
Itga6-201ENSMUST00000028522 Il27Q8K3I6 234 aa24.51■■□□□ 1.51
Itga6-201ENSMUST00000028522 Ube2uB1AUC4 352 aa24.47■■□□□ 1.51
Itga6-201ENSMUST00000028522 Pcgf6Q99NA9 353 aa24.43■■□□□ 1.5
Itga6-201ENSMUST00000028522 Dcaf1Q80TR8 1506 aa24.4■■□□□ 1.5
Itga6-201ENSMUST00000028522 Chic1Q8CBW7 227 aa24.25■■□□□ 1.47
Itga6-201ENSMUST00000028522 Supt5hO55201 1082 aaKnown RBP24.14■■□□□ 1.45
Itga6-201ENSMUST00000028522 Ap3b1Q9Z1T1 1105 aa24.12■■□□□ 1.45
Itga6-201ENSMUST00000028522 Mier1Q5UAK0 511 aa24.11■■□□□ 1.45
Itga6-201ENSMUST00000028522 NacadQ5SWP3 1504 aa24.09■■□□□ 1.45
Itga6-201ENSMUST00000028522 Brd4Q9ESU6 1400 aaKnown RBP24.07■■□□□ 1.44
Itga6-201ENSMUST00000028522 Cep164Q5DU05 1446 aa24.05■■□□□ 1.44
Itga6-201ENSMUST00000028522 Baz1aO88379 1555 aa24.03■■□□□ 1.44
Itga6-201ENSMUST00000028522 Ppargc1bQ8VHJ7 1014 aa24■■□□□ 1.43
Itga6-201ENSMUST00000028522 Kdm5dQ62240 1548 aa23.92■■□□□ 1.42
Itga6-201ENSMUST00000028522 Fam50aQ9WV03 339 aaKnown RBP23.84■■□□□ 1.41
Itga6-201ENSMUST00000028522 Plekhg3Q4VAC9 1341 aa23.83■■□□□ 1.41
Itga6-201ENSMUST00000028522 Cdk11bP24788 784 aaKnown RBP23.7■■□□□ 1.39
Itga6-201ENSMUST00000028522 TonslQ6NZL6 1363 aa23.65■■□□□ 1.38
Itga6-201ENSMUST00000028522 Nop58Q6DFW4 536 aaKnown RBP23.61■■□□□ 1.37
Itga6-201ENSMUST00000028522 Slc24a1Q91WD8 1130 aa23.59■■□□□ 1.37
Itga6-201ENSMUST00000028522 Lmod2Q3UHZ5 550 aa23.58■■□□□ 1.36
Itga6-201ENSMUST00000028522 Npm1Q61937 292 aaKnown RBP23.57■■□□□ 1.36
Itga6-201ENSMUST00000028522 NclP09405 707 aaKnown RBP23.53■■□□□ 1.36
Itga6-201ENSMUST00000028522 Rsf1E9PWW9 1441 aaKnown RBP23.52■■□□□ 1.36
Itga6-201ENSMUST00000028522 Golga3P55937 1487 aa23.51■■□□□ 1.35
Itga6-201ENSMUST00000028522 ScribQ80U72 1612 aa23.48■■□□□ 1.35
Itga6-201ENSMUST00000028522 Clip1Q922J3 1391 aa23.48■■□□□ 1.35
Itga6-201ENSMUST00000028522 Neurod1Q60867 357 aa23.44■■□□□ 1.34
Itga6-201ENSMUST00000028522 Sall2Q9QX96 1004 aa23.43■■□□□ 1.34
Itga6-201ENSMUST00000028522 Eid3Q3V124 375 aa23.42■■□□□ 1.34
Itga6-201ENSMUST00000028522 CenpbP27790 599 aa23.38■■□□□ 1.33
Itga6-201ENSMUST00000028522 Stra8P70278 393 aa23.35■■□□□ 1.33
Itga6-201ENSMUST00000028522 ClspnQ80YR7 1315 aa23.28■■□□□ 1.32
Itga6-201ENSMUST00000028522 Ccdc88bQ4QRL3 1481 aa23.27■■□□□ 1.31
Itga6-201ENSMUST00000028522 Sycp2Q9CUU3 1500 aa23.21■■□□□ 1.31
Itga6-201ENSMUST00000028522 Ubl4bQ9CQ84 188 aa23.17■■□□□ 1.3
Itga6-201ENSMUST00000028522 Mapk8ip2Q9ERE9 830 aa23.17■■□□□ 1.3
Itga6-201ENSMUST00000028522 Cecr2E9Q2Z1 1453 aa23.12■■□□□ 1.29
Itga6-201ENSMUST00000028522 Crybg2B7ZCC2 1516 aa23.09■■□□□ 1.29
Itga6-201ENSMUST00000028522 Pelp1Q9DBD5 1123 aaKnown RBP23.07■■□□□ 1.28
Itga6-201ENSMUST00000028522 Smarca2Q6DIC0 1577 aa23.07■■□□□ 1.28
Itga6-201ENSMUST00000028522 Kif15Q6P9L6 1387 aa23.01■■□□□ 1.27
Itga6-201ENSMUST00000028522 NrdcQ8BHG1 1161 aa22.99■■□□□ 1.27
Itga6-201ENSMUST00000028522 Setd5Q5XJV7 1441 aa22.98■■□□□ 1.27
Itga6-201ENSMUST00000028522 Aebp2Q9Z248 504 aaKnown RBP22.97■■□□□ 1.27
Itga6-201ENSMUST00000028522 Tnnt3Q9QZ47 272 aa22.97■■□□□ 1.27
Itga6-201ENSMUST00000028522 Zbtb7cQ8VCZ7 619 aa22.97■■□□□ 1.27
Itga6-201ENSMUST00000028522 BlmO88700 1416 aa22.96■■□□□ 1.27
Itga6-201ENSMUST00000028522 Eif5bQ05D44 1216 aaKnown RBP22.96■■□□□ 1.27
Itga6-201ENSMUST00000028522 CftrP26361 1476 aa22.91■■□□□ 1.26
Itga6-201ENSMUST00000028522 Chic2Q9D9G3 165 aa22.84■■□□□ 1.25
Itga6-201ENSMUST00000028522 Synj1Q8CHC4 1574 aa22.8■■□□□ 1.24
Itga6-201ENSMUST00000028522 Anks4bQ8K3X6 423 aa22.8■■□□□ 1.24
Itga6-201ENSMUST00000028522 Fkbp15Q6P9Q6 1216 aaKnown RBP22.78■■□□□ 1.24
Itga6-201ENSMUST00000028522 Csrnp3P59055 597 aa22.78■■□□□ 1.24
Itga6-201ENSMUST00000028522 Eea1Q8BL66 1411 aa22.77■■□□□ 1.23
Itga6-201ENSMUST00000028522 Cep162Q6ZQ06 1403 aa22.76■■□□□ 1.23
Itga6-201ENSMUST00000028522 Gm38655A0A286YDK6 273 aa22.76■■□□□ 1.23
Itga6-201ENSMUST00000028522 Fmn1Q05860 1466 aa22.74■■□□□ 1.23
Itga6-201ENSMUST00000028522 Anp32bQ9EST5 272 aaKnown RBP22.71■■□□□ 1.23
Itga6-201ENSMUST00000028522 Os9Q8K2C7 672 aa22.71■■□□□ 1.23
Itga6-201ENSMUST00000028522 Hnrnpul2Q00PI9 745 aaKnown RBP22.7■■□□□ 1.22
Itga6-201ENSMUST00000028522 Ccer2J3QPU5 274 aa22.68■■□□□ 1.22
Itga6-201ENSMUST00000028522 Zbtb4Q5F293 982 aa22.68■■□□□ 1.22
Itga6-201ENSMUST00000028522 Ercc6F8VPZ5 1481 aa22.67■■□□□ 1.22
Itga6-201ENSMUST00000028522 Ifnlr1Q8CGK5 535 aa22.66■■□□□ 1.22
Itga6-201ENSMUST00000028522 Ccdc18Q640L5 1455 aa22.65■■□□□ 1.22
Itga6-201ENSMUST00000028522 Pds5bQ4VA53 1446 aaKnown RBP22.62■■□□□ 1.21
Itga6-201ENSMUST00000028522 Rapgef2Q8CHG7 1496 aa22.52■■□□□ 1.2
Itga6-201ENSMUST00000028522 Smarca4Q3TKT4 1613 aaKnown RBP22.45■■□□□ 1.18
Itga6-201ENSMUST00000028522 Erich6D3Z6S9 713 aa22.42■■□□□ 1.18
Itga6-201ENSMUST00000028522 NeflP08551 543 aa22.42■■□□□ 1.18
Itga6-201ENSMUST00000028522 Cttnbp2B9EJA2 1648 aa22.38■■□□□ 1.17
Itga6-201ENSMUST00000028522 Atad2bE9Q166 1460 aaKnown RBP22.38■■□□□ 1.17
Itga6-201ENSMUST00000028522 Mrs2Q5NCE8 434 aa22.32■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms