RNA–Protein interactions for RNA: ENSMUST00000023882.13

Sympk-201, Transcript of Symplekin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sympk, Length 4,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sympk-201ENSMUST00000023882 Rhox8Q6VSS7 320 aa25.8■■□□□ 1.72
Sympk-201ENSMUST00000023882 Rpgrip1Q9EPQ2 1331 aa25.37■■□□□ 1.65
Sympk-201ENSMUST00000023882 Ehmt2Q9Z148 1263 aaKnown RBP24.94■■□□□ 1.58
Sympk-201ENSMUST00000023882 NischQ80TM9 1593 aa24.47■■□□□ 1.51
Sympk-201ENSMUST00000023882 Acin1Q9JIX8 1338 aaKnown RBP24.42■■□□□ 1.5
Sympk-201ENSMUST00000023882 Pcgf6Q99NA9 353 aa24.19■■□□□ 1.46
Sympk-201ENSMUST00000023882 Ccdc180J3QNE4 1664 aa23.84■■□□□ 1.41
Sympk-201ENSMUST00000023882 Las1lA2BE28 776 aaKnown RBP23.68■■□□□ 1.38
Sympk-201ENSMUST00000023882 Rtl1Q7M732 1744 aa23.62■■□□□ 1.37
Sympk-201ENSMUST00000023882 Zeb1Q64318 1117 aa23.61■■□□□ 1.37
Sympk-201ENSMUST00000023882 Supt5hO55201 1082 aaKnown RBP23.59■■□□□ 1.37
Sympk-201ENSMUST00000023882 Ccdc136Q3TVA9 1136 aa23.57■■□□□ 1.36
Sympk-201ENSMUST00000023882 Abcc9P70170 1546 aa23.34■■□□□ 1.33
Sympk-201ENSMUST00000023882 Neurod1Q60867 357 aa23.29■■□□□ 1.32
Sympk-201ENSMUST00000023882 Trim41Q5NCC3 630 aa23.24■■□□□ 1.31
Sympk-201ENSMUST00000023882 HrcG5E8J6 738 aa23.22■■□□□ 1.31
Sympk-201ENSMUST00000023882 Cngb1E1AZ71 1325 aa23.12■■□□□ 1.29
Sympk-201ENSMUST00000023882 Wdr66E9Q743 1299 aa23.08■■□□□ 1.29
Sympk-201ENSMUST00000023882 Gab3Q8BSM5 595 aa22.94■■□□□ 1.26
Sympk-201ENSMUST00000023882 Dcaf1Q80TR8 1506 aa22.88■■□□□ 1.25
Sympk-201ENSMUST00000023882 CenpbP27790 599 aa22.82■■□□□ 1.24
Sympk-201ENSMUST00000023882 NefmP08553 848 aa22.8■■□□□ 1.24
Sympk-201ENSMUST00000023882 Csrnp3P59055 597 aa22.72■■□□□ 1.23
Sympk-201ENSMUST00000023882 1700123L14RikQ3V2K7 440 aa22.64■■□□□ 1.21
Sympk-201ENSMUST00000023882 Sall2Q9QX96 1004 aa22.64■■□□□ 1.21
Sympk-201ENSMUST00000023882 Abcc8B2RUS7 1588 aa22.63■■□□□ 1.21
Sympk-201ENSMUST00000023882 Ppargc1bQ8VHJ7 1014 aa22.63■■□□□ 1.21
Sympk-201ENSMUST00000023882 Cdk11bP24788 784 aaKnown RBP22.58■■□□□ 1.21
Sympk-201ENSMUST00000023882 Myt1Q8CFC2 1127 aa22.54■■□□□ 1.2
Sympk-201ENSMUST00000023882 Anks4bQ8K3X6 423 aa22.5■■□□□ 1.19
Sympk-201ENSMUST00000023882 Mier1Q5UAK0 511 aa22.5■■□□□ 1.19
Sympk-201ENSMUST00000023882 Gm38655A0A286YDK6 273 aa22.49■■□□□ 1.19
Sympk-201ENSMUST00000023882 Nop58Q6DFW4 536 aaKnown RBP22.48■■□□□ 1.19
Sympk-201ENSMUST00000023882 Zcchc6Q5BLK4 1491 aaKnown RBP22.44■■□□□ 1.18
Sympk-201ENSMUST00000023882 UbtfP25976 765 aaKnown RBP22.39■■□□□ 1.17
Sympk-201ENSMUST00000023882 DiexfQ8BTT6 772 aaKnown RBP22.29■■□□□ 1.16
Sympk-201ENSMUST00000023882 Gm35339A0A140LHH9 1649 aa22.28■■□□□ 1.16
Sympk-201ENSMUST00000023882 Aplp2Q06335 707 aa22.2■■□□□ 1.14
Sympk-201ENSMUST00000023882 Myt1lP97500 1187 aa22■■□□□ 1.11
Sympk-201ENSMUST00000023882 Aebp2Q9Z248 504 aaKnown RBP22■■□□□ 1.11
Sympk-201ENSMUST00000023882 ClspnQ80YR7 1315 aa21.99■■□□□ 1.11
Sympk-201ENSMUST00000023882 Esf1Q3V1V3 845 aaKnown RBP21.97■■□□□ 1.11
Sympk-201ENSMUST00000023882 Cep164Q5DU05 1446 aa21.96■■□□□ 1.11
Sympk-201ENSMUST00000023882 Chic1Q8CBW7 227 aa21.89■■□□□ 1.09
Sympk-201ENSMUST00000023882 TonslQ6NZL6 1363 aa21.82■■□□□ 1.08
Sympk-201ENSMUST00000023882 Mapk8ip2Q9ERE9 830 aa21.8■■□□□ 1.08
Sympk-201ENSMUST00000023882 Pelp1Q9DBD5 1123 aaKnown RBP21.8■■□□□ 1.08
Sympk-201ENSMUST00000023882 Fam71e1A1L3C1 212 aa21.74■■□□□ 1.07
Sympk-201ENSMUST00000023882 Tnnt3Q9QZ47 272 aa21.74■■□□□ 1.07
Sympk-201ENSMUST00000023882 Bcl11aQ9QYE3 773 aa21.72■■□□□ 1.07
Sympk-201ENSMUST00000023882 Ttbk1Q6PCN3 1308 aa21.65■■□□□ 1.06
Sympk-201ENSMUST00000023882 Npm2Q80W85 207 aa21.64■■□□□ 1.05
Sympk-201ENSMUST00000023882 Slc24a1Q91WD8 1130 aa21.62■■□□□ 1.05
Sympk-201ENSMUST00000023882 Ap3b1Q9Z1T1 1105 aa21.61■■□□□ 1.05
Sympk-201ENSMUST00000023882 SafbD3YXK2 937 aaKnown RBP21.58■■□□□ 1.05
Sympk-201ENSMUST00000023882 Rb1cc1Q9ESK9 1588 aa21.52■■□□□ 1.04
Sympk-201ENSMUST00000023882 Stra8P70278 393 aa21.48■■□□□ 1.03
Sympk-201ENSMUST00000023882 Hnrnpul2Q00PI9 745 aaKnown RBP21.47■■□□□ 1.03
Sympk-201ENSMUST00000023882 Anp32aO35381 247 aa21.46■■□□□ 1.03
Sympk-201ENSMUST00000023882 Eid3Q3V124 375 aa21.41■■□□□ 1.02
Sympk-201ENSMUST00000023882 Plekhg3Q4VAC9 1341 aa21.39■■□□□ 1.01
Sympk-201ENSMUST00000023882 Amer1Q7TS75 1132 aa21.37■■□□□ 1.01
Sympk-201ENSMUST00000023882 Rsf1E9PWW9 1441 aaKnown RBP21.37■■□□□ 1.01
Sympk-201ENSMUST00000023882 NclP09405 707 aaKnown RBP21.3■■□□□ 1
Sympk-201ENSMUST00000023882 Eif5bQ05D44 1216 aaKnown RBP21.27■■□□□ 1
Sympk-201ENSMUST00000023882 Rtl5Q5DTT4 599 aa21.26■□□□□ 0.99
Sympk-201ENSMUST00000023882 Ube2uB1AUC4 352 aa21.25■□□□□ 0.99
Sympk-201ENSMUST00000023882 PrkcshO08795 521 aa21.15■□□□□ 0.98
Sympk-201ENSMUST00000023882 Calr4Q3TQS0 420 aa21.13■□□□□ 0.97
Sympk-201ENSMUST00000023882 Baz1aO88379 1555 aa21.12■□□□□ 0.97
Sympk-201ENSMUST00000023882 Ifnlr1Q8CGK5 535 aa21.11■□□□□ 0.97
Sympk-201ENSMUST00000023882 Fam50aQ9WV03 339 aaKnown RBP21.08■□□□□ 0.97
Sympk-201ENSMUST00000023882 Ccdc88bQ4QRL3 1481 aa21.06■□□□□ 0.96
Sympk-201ENSMUST00000023882 Ppp4r2Q0VGB7 417 aa21.03■□□□□ 0.96
Sympk-201ENSMUST00000023882 Clip1Q922J3 1391 aa20.95■□□□□ 0.94
Sympk-201ENSMUST00000023882 4933416C03RikQ3V063 378 aa20.93■□□□□ 0.94
Sympk-201ENSMUST00000023882 Brd4Q9ESU6 1400 aaKnown RBP20.92■□□□□ 0.94
Sympk-201ENSMUST00000023882 Nolc1E9Q5C9 702 aaKnown RBP20.86■□□□□ 0.93
Sympk-201ENSMUST00000023882 Golga3P55937 1487 aa20.85■□□□□ 0.93
Sympk-201ENSMUST00000023882 Wdr43Q6ZQL4 677 aaKnown RBP20.84■□□□□ 0.93
Sympk-201ENSMUST00000023882 NrdcQ8BHG1 1161 aa20.83■□□□□ 0.93
Sympk-201ENSMUST00000023882 Il27Q8K3I6 234 aa20.78■□□□□ 0.92
Sympk-201ENSMUST00000023882 Supt16hQ920B9 1047 aa20.76■□□□□ 0.91
Sympk-201ENSMUST00000023882 P3h3Q8CG70 732 aa20.7■□□□□ 0.9
Sympk-201ENSMUST00000023882 DaxxO35613 739 aa20.69■□□□□ 0.9
Sympk-201ENSMUST00000023882 Lmod2Q3UHZ5 550 aa20.68■□□□□ 0.9
Sympk-201ENSMUST00000023882 Kdm5dQ62240 1548 aa20.65■□□□□ 0.9
Sympk-201ENSMUST00000023882 Znf710Q3U288 666 aa20.58■□□□□ 0.89
Sympk-201ENSMUST00000023882 Mrs2Q5NCE8 434 aa20.56■□□□□ 0.88
Sympk-201ENSMUST00000023882 Ccdc27Q3V036 639 aa20.55■□□□□ 0.88
Sympk-201ENSMUST00000023882 Hdac5Q9Z2V6 1113 aa20.54■□□□□ 0.88
Sympk-201ENSMUST00000023882 Slc4a3P16283 1227 aa20.53■□□□□ 0.88
Sympk-201ENSMUST00000023882 Hsp90aa1P07901 733 aaKnown RBP20.48■□□□□ 0.87
Sympk-201ENSMUST00000023882 Smarca2Q6DIC0 1577 aa20.48■□□□□ 0.87
Sympk-201ENSMUST00000023882 NacadQ5SWP3 1504 aa20.47■□□□□ 0.87
Sympk-201ENSMUST00000023882 Cep162Q6ZQ06 1403 aa20.46■□□□□ 0.87
Sympk-201ENSMUST00000023882 Upf2A2AT37 1269 aaKnown RBP20.45■□□□□ 0.86
Sympk-201ENSMUST00000023882 NeflP08551 543 aa20.43■□□□□ 0.86
Sympk-201ENSMUST00000023882 Hspa5P20029 655 aaKnown RBP20.4■□□□□ 0.86
Sympk-201ENSMUST00000023882 Sin3aQ60520 1274 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms