RNA–Protein interactions for RNA: ENSMUST00000022337.10

Cdhr1-201, Transcript of Cadherin-related family member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdhr1, Length 4,332 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1-201ENSMUST00000022337 Rhox8Q6VSS7 320 aa14.84□□□□□ -0.03
Cdhr1-201ENSMUST00000022337 NischQ80TM9 1593 aa14.68□□□□□ -0.06
Cdhr1-201ENSMUST00000022337 Abcc9P70170 1546 aa14.06□□□□□ -0.16
Cdhr1-201ENSMUST00000022337 Rpgrip1Q9EPQ2 1331 aa13.79□□□□□ -0.2
Cdhr1-201ENSMUST00000022337 Gm35339A0A140LHH9 1649 aa13.74□□□□□ -0.21
Cdhr1-201ENSMUST00000022337 Rtl1Q7M732 1744 aa13.71□□□□□ -0.22
Cdhr1-201ENSMUST00000022337 Abcc8B2RUS7 1588 aa13.7□□□□□ -0.22
Cdhr1-201ENSMUST00000022337 Ccdc180J3QNE4 1664 aa13.65□□□□□ -0.22
Cdhr1-201ENSMUST00000022337 Ehmt2Q9Z148 1263 aaKnown RBP13.58□□□□□ -0.24
Cdhr1-201ENSMUST00000022337 Ccdc136Q3TVA9 1136 aa13.53□□□□□ -0.24
Cdhr1-201ENSMUST00000022337 Acin1Q9JIX8 1338 aaKnown RBP13.3□□□□□ -0.28
Cdhr1-201ENSMUST00000022337 Trim41Q5NCC3 630 aa13.25□□□□□ -0.29
Cdhr1-201ENSMUST00000022337 HrcG5E8J6 738 aa13.22□□□□□ -0.29
Cdhr1-201ENSMUST00000022337 Cngb1E1AZ71 1325 aa13.08□□□□□ -0.32
Cdhr1-201ENSMUST00000022337 Gab3Q8BSM5 595 aa13.02□□□□□ -0.33
Cdhr1-201ENSMUST00000022337 Zcchc6Q5BLK4 1491 aaKnown RBP12.94□□□□□ -0.34
Cdhr1-201ENSMUST00000022337 Rb1cc1Q9ESK9 1588 aa12.91□□□□□ -0.34
Cdhr1-201ENSMUST00000022337 Esf1Q3V1V3 845 aaKnown RBP12.9□□□□□ -0.34
Cdhr1-201ENSMUST00000022337 Zeb1Q64318 1117 aa12.86□□□□□ -0.35
Cdhr1-201ENSMUST00000022337 Pcgf6Q99NA9 353 aa12.86□□□□□ -0.35
Cdhr1-201ENSMUST00000022337 Dcaf1Q80TR8 1506 aa12.85□□□□□ -0.35
Cdhr1-201ENSMUST00000022337 NefmP08553 848 aa12.69□□□□□ -0.38
Cdhr1-201ENSMUST00000022337 Baz1aO88379 1555 aa12.69□□□□□ -0.38
Cdhr1-201ENSMUST00000022337 Wdr66E9Q743 1299 aa12.67□□□□□ -0.38
Cdhr1-201ENSMUST00000022337 Las1lA2BE28 776 aaKnown RBP12.66□□□□□ -0.38
Cdhr1-201ENSMUST00000022337 Cep164Q5DU05 1446 aa12.65□□□□□ -0.38
Cdhr1-201ENSMUST00000022337 Supt5hO55201 1082 aaKnown RBP12.64□□□□□ -0.39
Cdhr1-201ENSMUST00000022337 Myt1lP97500 1187 aa12.6□□□□□ -0.39
Cdhr1-201ENSMUST00000022337 Kdm5dQ62240 1548 aa12.58□□□□□ -0.4
Cdhr1-201ENSMUST00000022337 UbtfP25976 765 aaKnown RBP12.57□□□□□ -0.4
Cdhr1-201ENSMUST00000022337 NacadQ5SWP3 1504 aa12.57□□□□□ -0.4
Cdhr1-201ENSMUST00000022337 Npm2Q80W85 207 aa12.56□□□□□ -0.4
Cdhr1-201ENSMUST00000022337 Chic1Q8CBW7 227 aa12.52□□□□□ -0.41
Cdhr1-201ENSMUST00000022337 ScribQ80U72 1612 aa12.5□□□□□ -0.41
Cdhr1-201ENSMUST00000022337 Mier1Q5UAK0 511 aa12.48□□□□□ -0.41
Cdhr1-201ENSMUST00000022337 Brd4Q9ESU6 1400 aaKnown RBP12.48□□□□□ -0.41
Cdhr1-201ENSMUST00000022337 Rsf1E9PWW9 1441 aaKnown RBP12.34□□□□□ -0.43
Cdhr1-201ENSMUST00000022337 Golga3P55937 1487 aa12.29□□□□□ -0.44
Cdhr1-201ENSMUST00000022337 Neurod1Q60867 357 aa12.29□□□□□ -0.44
Cdhr1-201ENSMUST00000022337 Smarca2Q6DIC0 1577 aa12.28□□□□□ -0.44
Cdhr1-201ENSMUST00000022337 Cdk11bP24788 784 aaKnown RBP12.26□□□□□ -0.45
Cdhr1-201ENSMUST00000022337 Sall2Q9QX96 1004 aa12.25□□□□□ -0.45
Cdhr1-201ENSMUST00000022337 Crybg2B7ZCC2 1516 aa12.25□□□□□ -0.45
Cdhr1-201ENSMUST00000022337 Ppargc1bQ8VHJ7 1014 aa12.24□□□□□ -0.45
Cdhr1-201ENSMUST00000022337 Nop58Q6DFW4 536 aaKnown RBP12.22□□□□□ -0.45
Cdhr1-201ENSMUST00000022337 Il27Q8K3I6 234 aa12.21□□□□□ -0.45
Cdhr1-201ENSMUST00000022337 Ccdc88bQ4QRL3 1481 aa12.2□□□□□ -0.46
Cdhr1-201ENSMUST00000022337 TonslQ6NZL6 1363 aa12.19□□□□□ -0.46
Cdhr1-201ENSMUST00000022337 Sycp2Q9CUU3 1500 aa12.18□□□□□ -0.46
Cdhr1-201ENSMUST00000022337 Plekhg3Q4VAC9 1341 aa12.16□□□□□ -0.46
Cdhr1-201ENSMUST00000022337 Ap3b1Q9Z1T1 1105 aa12.15□□□□□ -0.46
Cdhr1-201ENSMUST00000022337 Ube2uB1AUC4 352 aa12.14□□□□□ -0.47
Cdhr1-201ENSMUST00000022337 ClspnQ80YR7 1315 aa12.13□□□□□ -0.47
Cdhr1-201ENSMUST00000022337 CenpbP27790 599 aa12.13□□□□□ -0.47
Cdhr1-201ENSMUST00000022337 Cecr2E9Q2Z1 1453 aa12.09□□□□□ -0.47
Cdhr1-201ENSMUST00000022337 Clip1Q922J3 1391 aa12.08□□□□□ -0.48
Cdhr1-201ENSMUST00000022337 Anks4bQ8K3X6 423 aa12.04□□□□□ -0.48
Cdhr1-201ENSMUST00000022337 Fam50aQ9WV03 339 aaKnown RBP12.02□□□□□ -0.48
Cdhr1-201ENSMUST00000022337 Synj1Q8CHC4 1574 aa12.02□□□□□ -0.49
Cdhr1-201ENSMUST00000022337 Aebp2Q9Z248 504 aaKnown RBP12□□□□□ -0.49
Cdhr1-201ENSMUST00000022337 CftrP26361 1476 aa12□□□□□ -0.49
Cdhr1-201ENSMUST00000022337 Csrnp3P59055 597 aa11.97□□□□□ -0.49
Cdhr1-201ENSMUST00000022337 Stra8P70278 393 aa11.96□□□□□ -0.49
Cdhr1-201ENSMUST00000022337 Eid3Q3V124 375 aa11.96□□□□□ -0.49
Cdhr1-201ENSMUST00000022337 NclP09405 707 aaKnown RBP11.95□□□□□ -0.5
Cdhr1-201ENSMUST00000022337 Fmn1Q05860 1466 aa11.91□□□□□ -0.5
Cdhr1-201ENSMUST00000022337 Tnnt3Q9QZ47 272 aa11.9□□□□□ -0.5
Cdhr1-201ENSMUST00000022337 Cep162Q6ZQ06 1403 aa11.89□□□□□ -0.51
Cdhr1-201ENSMUST00000022337 Lmod2Q3UHZ5 550 aa11.89□□□□□ -0.51
Cdhr1-201ENSMUST00000022337 Slc24a1Q91WD8 1130 aa11.88□□□□□ -0.51
Cdhr1-201ENSMUST00000022337 Cttnbp2B9EJA2 1648 aa11.84□□□□□ -0.51
Cdhr1-201ENSMUST00000022337 1700123L14RikQ3V2K7 440 aa11.82□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Setd5Q5XJV7 1441 aa11.81□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Gm38655A0A286YDK6 273 aa11.81□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Mapk8ip2Q9ERE9 830 aa11.81□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Rapgef2Q8CHG7 1496 aa11.81□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Aplp2Q06335 707 aa11.8□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Npm1Q61937 292 aaKnown RBP11.8□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Pelp1Q9DBD5 1123 aaKnown RBP11.8□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Eea1Q8BL66 1411 aa11.79□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Myt1Q8CFC2 1127 aa11.79□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 Smarca4Q3TKT4 1613 aaKnown RBP11.77□□□□□ -0.52
Cdhr1-201ENSMUST00000022337 BlmO88700 1416 aa11.76□□□□□ -0.53
Cdhr1-201ENSMUST00000022337 Cc2d2aQ8CFW7 1633 aa11.74□□□□□ -0.53
Cdhr1-201ENSMUST00000022337 Kif15Q6P9L6 1387 aa11.74□□□□□ -0.53
Cdhr1-201ENSMUST00000022337 Top2bQ64511 1612 aa11.69□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 BicraF8VPZ9 1578 aa11.68□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 Top2aQ01320 1528 aaKnown RBP11.67□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 Ccer2J3QPU5 274 aa11.66□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 Eif5bQ05D44 1216 aaKnown RBP11.65□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 NrdcQ8BHG1 1161 aa11.65□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 DiexfQ8BTT6 772 aaKnown RBP11.65□□□□□ -0.54
Cdhr1-201ENSMUST00000022337 Pds5bQ4VA53 1446 aaKnown RBP11.63□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Ccdc18Q640L5 1455 aa11.63□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Iqgap2Q3UQ44 1575 aa11.61□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Ubl4bQ9CQ84 188 aa11.61□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Atad2bE9Q166 1460 aaKnown RBP11.6□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Ercc6F8VPZ5 1481 aa11.6□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Ttbk1Q6PCN3 1308 aa11.59□□□□□ -0.55
Cdhr1-201ENSMUST00000022337 Anp32aO35381 247 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 76.7 ms