RNA–Protein interactions for RNA: ENSMUST00000021530.7

Hif1a-201, Transcript of Hypoxia-inducible factor 1-alpha, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Hif1a, Length 4,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1a-201ENSMUST00000021530 Rhox8Q6VSS7 320 aa25.1■■□□□ 1.61
Hif1a-201ENSMUST00000021530 NischQ80TM9 1593 aa23.83■■□□□ 1.41
Hif1a-201ENSMUST00000021530 Abcc9P70170 1546 aa23.07■■□□□ 1.28
Hif1a-201ENSMUST00000021530 Gm35339A0A140LHH9 1649 aa23.04■■□□□ 1.28
Hif1a-201ENSMUST00000021530 Abcc8B2RUS7 1588 aa22.47■■□□□ 1.19
Hif1a-201ENSMUST00000021530 Ccdc136Q3TVA9 1136 aa22.38■■□□□ 1.17
Hif1a-201ENSMUST00000021530 Rtl1Q7M732 1744 aa22.38■■□□□ 1.17
Hif1a-201ENSMUST00000021530 Esf1Q3V1V3 845 aaKnown RBP22.24■■□□□ 1.15
Hif1a-201ENSMUST00000021530 Ehmt2Q9Z148 1263 aaKnown RBP22.12■■□□□ 1.13
Hif1a-201ENSMUST00000021530 Cngb1E1AZ71 1325 aa22.06■■□□□ 1.12
Hif1a-201ENSMUST00000021530 Ccdc180J3QNE4 1664 aa22.06■■□□□ 1.12
Hif1a-201ENSMUST00000021530 Gab3Q8BSM5 595 aa21.78■■□□□ 1.08
Hif1a-201ENSMUST00000021530 Zeb1Q64318 1117 aa21.77■■□□□ 1.08
Hif1a-201ENSMUST00000021530 Trim41Q5NCC3 630 aa21.74■■□□□ 1.07
Hif1a-201ENSMUST00000021530 Rpgrip1Q9EPQ2 1331 aa21.7■■□□□ 1.06
Hif1a-201ENSMUST00000021530 Npm2Q80W85 207 aa21.6■■□□□ 1.05
Hif1a-201ENSMUST00000021530 Ube2uB1AUC4 352 aa21.58■■□□□ 1.05
Hif1a-201ENSMUST00000021530 Myt1lP97500 1187 aa21.47■■□□□ 1.03
Hif1a-201ENSMUST00000021530 Wdr66E9Q743 1299 aa21.27■□□□□ 0.99
Hif1a-201ENSMUST00000021530 Zcchc6Q5BLK4 1491 aaKnown RBP21.22■□□□□ 0.99
Hif1a-201ENSMUST00000021530 Las1lA2BE28 776 aaKnown RBP21.21■□□□□ 0.99
Hif1a-201ENSMUST00000021530 HrcG5E8J6 738 aa21.11■□□□□ 0.97
Hif1a-201ENSMUST00000021530 Dcaf1Q80TR8 1506 aa21.08■□□□□ 0.96
Hif1a-201ENSMUST00000021530 Il27Q8K3I6 234 aa21.03■□□□□ 0.96
Hif1a-201ENSMUST00000021530 Acin1Q9JIX8 1338 aaKnown RBP21.01■□□□□ 0.95
Hif1a-201ENSMUST00000021530 Rb1cc1Q9ESK9 1588 aa20.91■□□□□ 0.94
Hif1a-201ENSMUST00000021530 UbtfP25976 765 aaKnown RBP20.81■□□□□ 0.92
Hif1a-201ENSMUST00000021530 Baz1aO88379 1555 aa20.68■□□□□ 0.9
Hif1a-201ENSMUST00000021530 ScribQ80U72 1612 aa20.64■□□□□ 0.89
Hif1a-201ENSMUST00000021530 Kdm5dQ62240 1548 aa20.51■□□□□ 0.87
Hif1a-201ENSMUST00000021530 NacadQ5SWP3 1504 aa20.44■□□□□ 0.86
Hif1a-201ENSMUST00000021530 Ap3b1Q9Z1T1 1105 aa20.41■□□□□ 0.86
Hif1a-201ENSMUST00000021530 NefmP08553 848 aa20.35■□□□□ 0.85
Hif1a-201ENSMUST00000021530 Fam50aQ9WV03 339 aaKnown RBP20.3■□□□□ 0.84
Hif1a-201ENSMUST00000021530 Cep164Q5DU05 1446 aa20.3■□□□□ 0.84
Hif1a-201ENSMUST00000021530 Slc24a1Q91WD8 1130 aa20.28■□□□□ 0.84
Hif1a-201ENSMUST00000021530 Crybg2B7ZCC2 1516 aa20.24■□□□□ 0.83
Hif1a-201ENSMUST00000021530 Pcgf6Q99NA9 353 aa20.2■□□□□ 0.82
Hif1a-201ENSMUST00000021530 Pelp1Q9DBD5 1123 aaKnown RBP20.18■□□□□ 0.82
Hif1a-201ENSMUST00000021530 Neurod1Q60867 357 aa20.15■□□□□ 0.82
Hif1a-201ENSMUST00000021530 Npm1Q61937 292 aaKnown RBP20.15■□□□□ 0.82
Hif1a-201ENSMUST00000021530 Smarca2Q6DIC0 1577 aa20.14■□□□□ 0.82
Hif1a-201ENSMUST00000021530 Os9Q8K2C7 672 aa20■□□□□ 0.79
Hif1a-201ENSMUST00000021530 Brd4Q9ESU6 1400 aaKnown RBP19.99■□□□□ 0.79
Hif1a-201ENSMUST00000021530 Stra8P70278 393 aa19.97■□□□□ 0.79
Hif1a-201ENSMUST00000021530 NclP09405 707 aaKnown RBP19.94■□□□□ 0.78
Hif1a-201ENSMUST00000021530 Lmod2Q3UHZ5 550 aa19.91■□□□□ 0.78
Hif1a-201ENSMUST00000021530 Ifnlr1Q8CGK5 535 aa19.9■□□□□ 0.78
Hif1a-201ENSMUST00000021530 Zbtb7cQ8VCZ7 619 aa19.9■□□□□ 0.78
Hif1a-201ENSMUST00000021530 Sycp2Q9CUU3 1500 aa19.9■□□□□ 0.78
Hif1a-201ENSMUST00000021530 Ppargc1bQ8VHJ7 1014 aa19.85■□□□□ 0.77
Hif1a-201ENSMUST00000021530 Chic1Q8CBW7 227 aa19.83■□□□□ 0.77
Hif1a-201ENSMUST00000021530 Anp32bQ9EST5 272 aaKnown RBP19.8■□□□□ 0.76
Hif1a-201ENSMUST00000021530 Rsf1E9PWW9 1441 aaKnown RBP19.8■□□□□ 0.76
Hif1a-201ENSMUST00000021530 Supt5hO55201 1082 aaKnown RBP19.79■□□□□ 0.76
Hif1a-201ENSMUST00000021530 NrdcQ8BHG1 1161 aa19.77■□□□□ 0.75
Hif1a-201ENSMUST00000021530 Golga3P55937 1487 aa19.76■□□□□ 0.75
Hif1a-201ENSMUST00000021530 Hnrnpul2Q00PI9 745 aaKnown RBP19.75■□□□□ 0.75
Hif1a-201ENSMUST00000021530 Plekhg3Q4VAC9 1341 aa19.73■□□□□ 0.75
Hif1a-201ENSMUST00000021530 Cdk11bP24788 784 aaKnown RBP19.67■□□□□ 0.74
Hif1a-201ENSMUST00000021530 Fkbp15Q6P9Q6 1216 aaKnown RBP19.67■□□□□ 0.74
Hif1a-201ENSMUST00000021530 Gm13697A2AK42 830 aa19.64■□□□□ 0.74
Hif1a-201ENSMUST00000021530 CenpbP27790 599 aa19.64■□□□□ 0.73
Hif1a-201ENSMUST00000021530 Ubl4bQ9CQ84 188 aa19.61■□□□□ 0.73
Hif1a-201ENSMUST00000021530 Mier1Q5UAK0 511 aa19.6■□□□□ 0.73
Hif1a-201ENSMUST00000021530 Ccdc88bQ4QRL3 1481 aa19.6■□□□□ 0.73
Hif1a-201ENSMUST00000021530 TonslQ6NZL6 1363 aa19.59■□□□□ 0.73
Hif1a-201ENSMUST00000021530 Cecr2E9Q2Z1 1453 aa19.58■□□□□ 0.72
Hif1a-201ENSMUST00000021530 Eif5bQ05D44 1216 aaKnown RBP19.54■□□□□ 0.72
Hif1a-201ENSMUST00000021530 Synj1Q8CHC4 1574 aa19.51■□□□□ 0.71
Hif1a-201ENSMUST00000021530 Nop58Q6DFW4 536 aaKnown RBP19.51■□□□□ 0.71
Hif1a-201ENSMUST00000021530 Plppr3Q7TPB0 716 aa19.51■□□□□ 0.71
Hif1a-201ENSMUST00000021530 Zbtb4Q5F293 982 aa19.47■□□□□ 0.71
Hif1a-201ENSMUST00000021530 Erich6D3Z6S9 713 aa19.46■□□□□ 0.71
Hif1a-201ENSMUST00000021530 CftrP26361 1476 aa19.44■□□□□ 0.7
Hif1a-201ENSMUST00000021530 Atp1b4Q99ME6 356 aa19.41■□□□□ 0.7
Hif1a-201ENSMUST00000021530 NeflP08551 543 aa19.4■□□□□ 0.7
Hif1a-201ENSMUST00000021530 Eid3Q3V124 375 aa19.35■□□□□ 0.69
Hif1a-201ENSMUST00000021530 Amer1Q7TS75 1132 aa19.32■□□□□ 0.68
Hif1a-201ENSMUST00000021530 Ttbk1Q6PCN3 1308 aa19.32■□□□□ 0.68
Hif1a-201ENSMUST00000021530 Cttnbp2B9EJA2 1648 aa19.3■□□□□ 0.68
Hif1a-201ENSMUST00000021530 Clip1Q922J3 1391 aa19.29■□□□□ 0.68
Hif1a-201ENSMUST00000021530 Prdm10Q3UTQ7 1184 aa19.29■□□□□ 0.68
Hif1a-201ENSMUST00000021530 Gm13695A2AK44 830 aa19.29■□□□□ 0.68
Hif1a-201ENSMUST00000021530 Top2bQ64511 1612 aa19.25■□□□□ 0.67
Hif1a-201ENSMUST00000021530 Sall2Q9QX96 1004 aa19.25■□□□□ 0.67
Hif1a-201ENSMUST00000021530 BicraF8VPZ9 1578 aa19.24■□□□□ 0.67
Hif1a-201ENSMUST00000021530 Tnnt3Q9QZ47 272 aa19.24■□□□□ 0.67
Hif1a-201ENSMUST00000021530 Fmn1Q05860 1466 aa19.2■□□□□ 0.66
Hif1a-201ENSMUST00000021530 Mapk8ip2Q9ERE9 830 aa19.19■□□□□ 0.66
Hif1a-201ENSMUST00000021530 Rapgef2Q8CHG7 1496 aa19.16■□□□□ 0.66
Hif1a-201ENSMUST00000021530 Smarca4Q3TKT4 1613 aaKnown RBP19.15■□□□□ 0.66
Hif1a-201ENSMUST00000021530 Chic2Q9D9G3 165 aa19.11■□□□□ 0.65
Hif1a-201ENSMUST00000021530 Cc2d2aQ8CFW7 1633 aa19.08■□□□□ 0.65
Hif1a-201ENSMUST00000021530 Cep162Q6ZQ06 1403 aa19.07■□□□□ 0.64
Hif1a-201ENSMUST00000021530 ClspnQ80YR7 1315 aa19.06■□□□□ 0.64
Hif1a-201ENSMUST00000021530 Nlrp6Q91WS2 869 aa19.04■□□□□ 0.64
Hif1a-201ENSMUST00000021530 Anks4bQ8K3X6 423 aa19.02■□□□□ 0.64
Hif1a-201ENSMUST00000021530 Top2aQ01320 1528 aaKnown RBP19.02■□□□□ 0.64
Hif1a-201ENSMUST00000021530 Hdac5Q9Z2V6 1113 aa19■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms