RNA–Protein interactions for RNA: ENSMUST00000015749.5

Srf-201, Transcript of Serum response factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srf, Length 4,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srf-201ENSMUST00000015749 Rhox8Q6VSS7 320 aa32.48■■■□□ 2.79
Srf-201ENSMUST00000015749 NischQ80TM9 1593 aa31.26■■■□□ 2.59
Srf-201ENSMUST00000015749 Ccdc136Q3TVA9 1136 aa29.71■■■□□ 2.35
Srf-201ENSMUST00000015749 Abcc9P70170 1546 aa29.6■■■□□ 2.33
Srf-201ENSMUST00000015749 Gm35339A0A140LHH9 1649 aa29.52■■■□□ 2.32
Srf-201ENSMUST00000015749 Ehmt2Q9Z148 1263 aaKnown RBP29.34■■■□□ 2.29
Srf-201ENSMUST00000015749 Abcc8B2RUS7 1588 aa29.14■■■□□ 2.26
Srf-201ENSMUST00000015749 Cngb1E1AZ71 1325 aa28.66■■■□□ 2.18
Srf-201ENSMUST00000015749 Trim41Q5NCC3 630 aa28.53■■■□□ 2.16
Srf-201ENSMUST00000015749 Esf1Q3V1V3 845 aaKnown RBP28.5■■■□□ 2.15
Srf-201ENSMUST00000015749 Gab3Q8BSM5 595 aa28.49■■■□□ 2.15
Srf-201ENSMUST00000015749 Zcchc6Q5BLK4 1491 aaKnown RBP28.06■■■□□ 2.08
Srf-201ENSMUST00000015749 Ccdc180J3QNE4 1664 aa27.94■■■□□ 2.06
Srf-201ENSMUST00000015749 Rpgrip1Q9EPQ2 1331 aa27.92■■■□□ 2.06
Srf-201ENSMUST00000015749 HrcG5E8J6 738 aa27.71■■■□□ 2.03
Srf-201ENSMUST00000015749 Rtl1Q7M732 1744 aa27.71■■■□□ 2.03
Srf-201ENSMUST00000015749 Myt1lP97500 1187 aa27.69■■■□□ 2.02
Srf-201ENSMUST00000015749 Npm2Q80W85 207 aa27.54■■■□□ 2
Srf-201ENSMUST00000015749 Zeb1Q64318 1117 aa27.41■■□□□ 1.98
Srf-201ENSMUST00000015749 Acin1Q9JIX8 1338 aaKnown RBP27.41■■□□□ 1.98
Srf-201ENSMUST00000015749 Rb1cc1Q9ESK9 1588 aa27.39■■□□□ 1.98
Srf-201ENSMUST00000015749 Il27Q8K3I6 234 aa27.27■■□□□ 1.96
Srf-201ENSMUST00000015749 UbtfP25976 765 aaKnown RBP27.2■■□□□ 1.94
Srf-201ENSMUST00000015749 Dcaf1Q80TR8 1506 aa27.1■■□□□ 1.93
Srf-201ENSMUST00000015749 Chic1Q8CBW7 227 aa27.06■■□□□ 1.92
Srf-201ENSMUST00000015749 Wdr66E9Q743 1299 aa27.03■■□□□ 1.92
Srf-201ENSMUST00000015749 NacadQ5SWP3 1504 aa26.96■■□□□ 1.91
Srf-201ENSMUST00000015749 ScribQ80U72 1612 aa26.94■■□□□ 1.9
Srf-201ENSMUST00000015749 Kdm5dQ62240 1548 aa26.94■■□□□ 1.9
Srf-201ENSMUST00000015749 Baz1aO88379 1555 aa26.8■■□□□ 1.88
Srf-201ENSMUST00000015749 Las1lA2BE28 776 aaKnown RBP26.76■■□□□ 1.88
Srf-201ENSMUST00000015749 Ap3b1Q9Z1T1 1105 aa26.73■■□□□ 1.87
Srf-201ENSMUST00000015749 Ube2uB1AUC4 352 aa26.71■■□□□ 1.87
Srf-201ENSMUST00000015749 Brd4Q9ESU6 1400 aaKnown RBP26.62■■□□□ 1.85
Srf-201ENSMUST00000015749 Pcgf6Q99NA9 353 aa26.56■■□□□ 1.84
Srf-201ENSMUST00000015749 Ppargc1bQ8VHJ7 1014 aa26.52■■□□□ 1.84
Srf-201ENSMUST00000015749 NefmP08553 848 aa26.48■■□□□ 1.83
Srf-201ENSMUST00000015749 Mier1Q5UAK0 511 aa26.47■■□□□ 1.83
Srf-201ENSMUST00000015749 Cep164Q5DU05 1446 aa26.45■■□□□ 1.83
Srf-201ENSMUST00000015749 Plekhg3Q4VAC9 1341 aa26.37■■□□□ 1.81
Srf-201ENSMUST00000015749 Supt5hO55201 1082 aaKnown RBP26.35■■□□□ 1.81
Srf-201ENSMUST00000015749 Rsf1E9PWW9 1441 aaKnown RBP26.2■■□□□ 1.79
Srf-201ENSMUST00000015749 Fam50aQ9WV03 339 aaKnown RBP26.2■■□□□ 1.78
Srf-201ENSMUST00000015749 Lmod2Q3UHZ5 550 aa26.12■■□□□ 1.77
Srf-201ENSMUST00000015749 Npm1Q61937 292 aaKnown RBP26.12■■□□□ 1.77
Srf-201ENSMUST00000015749 Sycp2Q9CUU3 1500 aa26.1■■□□□ 1.77
Srf-201ENSMUST00000015749 Cecr2E9Q2Z1 1453 aa26.07■■□□□ 1.76
Srf-201ENSMUST00000015749 Golga3P55937 1487 aa26.07■■□□□ 1.76
Srf-201ENSMUST00000015749 Ccdc88bQ4QRL3 1481 aa26■■□□□ 1.75
Srf-201ENSMUST00000015749 Eid3Q3V124 375 aa25.89■■□□□ 1.74
Srf-201ENSMUST00000015749 Ubl4bQ9CQ84 188 aa25.89■■□□□ 1.74
Srf-201ENSMUST00000015749 Clip1Q922J3 1391 aa25.86■■□□□ 1.73
Srf-201ENSMUST00000015749 Smarca2Q6DIC0 1577 aa25.8■■□□□ 1.72
Srf-201ENSMUST00000015749 Neurod1Q60867 357 aa25.76■■□□□ 1.71
Srf-201ENSMUST00000015749 TonslQ6NZL6 1363 aa25.75■■□□□ 1.71
Srf-201ENSMUST00000015749 Slc24a1Q91WD8 1130 aa25.72■■□□□ 1.71
Srf-201ENSMUST00000015749 Crybg2B7ZCC2 1516 aa25.71■■□□□ 1.71
Srf-201ENSMUST00000015749 NclP09405 707 aaKnown RBP25.66■■□□□ 1.7
Srf-201ENSMUST00000015749 Sall2Q9QX96 1004 aa25.65■■□□□ 1.7
Srf-201ENSMUST00000015749 Kif15Q6P9L6 1387 aa25.65■■□□□ 1.7
Srf-201ENSMUST00000015749 CftrP26361 1476 aa25.62■■□□□ 1.69
Srf-201ENSMUST00000015749 Mapk8ip2Q9ERE9 830 aa25.61■■□□□ 1.69
Srf-201ENSMUST00000015749 Synj1Q8CHC4 1574 aa25.56■■□□□ 1.68
Srf-201ENSMUST00000015749 Cdk11bP24788 784 aaKnown RBP25.56■■□□□ 1.68
Srf-201ENSMUST00000015749 Nop58Q6DFW4 536 aaKnown RBP25.54■■□□□ 1.68
Srf-201ENSMUST00000015749 Zbtb7cQ8VCZ7 619 aa25.47■■□□□ 1.67
Srf-201ENSMUST00000015749 Fkbp15Q6P9Q6 1216 aaKnown RBP25.4■■□□□ 1.66
Srf-201ENSMUST00000015749 Setd5Q5XJV7 1441 aa25.39■■□□□ 1.65
Srf-201ENSMUST00000015749 CenpbP27790 599 aa25.36■■□□□ 1.65
Srf-201ENSMUST00000015749 BlmO88700 1416 aa25.34■■□□□ 1.65
Srf-201ENSMUST00000015749 Aebp2Q9Z248 504 aaKnown RBP25.33■■□□□ 1.65
Srf-201ENSMUST00000015749 Chic2Q9D9G3 165 aa25.3■■□□□ 1.64
Srf-201ENSMUST00000015749 Ifnlr1Q8CGK5 535 aa25.29■■□□□ 1.64
Srf-201ENSMUST00000015749 Pds5bQ4VA53 1446 aaKnown RBP25.26■■□□□ 1.63
Srf-201ENSMUST00000015749 ClspnQ80YR7 1315 aa25.24■■□□□ 1.63
Srf-201ENSMUST00000015749 Ercc6F8VPZ5 1481 aa25.23■■□□□ 1.63
Srf-201ENSMUST00000015749 Cep162Q6ZQ06 1403 aa25.23■■□□□ 1.63
Srf-201ENSMUST00000015749 Fmn1Q05860 1466 aa25.2■■□□□ 1.62
Srf-201ENSMUST00000015749 BicraF8VPZ9 1578 aa25.13■■□□□ 1.61
Srf-201ENSMUST00000015749 Smarca4Q3TKT4 1613 aaKnown RBP25.12■■□□□ 1.61
Srf-201ENSMUST00000015749 Rapgef2Q8CHG7 1496 aa25.11■■□□□ 1.61
Srf-201ENSMUST00000015749 Gm38655A0A286YDK6 273 aa25.1■■□□□ 1.61
Srf-201ENSMUST00000015749 Zbtb4Q5F293 982 aa25.09■■□□□ 1.61
Srf-201ENSMUST00000015749 Eea1Q8BL66 1411 aa25.08■■□□□ 1.61
Srf-201ENSMUST00000015749 Ccdc18Q640L5 1455 aa25.07■■□□□ 1.6
Srf-201ENSMUST00000015749 Atad2bE9Q166 1460 aaKnown RBP25.06■■□□□ 1.6
Srf-201ENSMUST00000015749 DiexfQ8BTT6 772 aaKnown RBP25.05■■□□□ 1.6
Srf-201ENSMUST00000015749 Csrnp3P59055 597 aa25.03■■□□□ 1.6
Srf-201ENSMUST00000015749 Hnrnpul2Q00PI9 745 aaKnown RBP25.02■■□□□ 1.6
Srf-201ENSMUST00000015749 Eif5bQ05D44 1216 aaKnown RBP24.97■■□□□ 1.59
Srf-201ENSMUST00000015749 Cttnbp2B9EJA2 1648 aa24.95■■□□□ 1.58
Srf-201ENSMUST00000015749 Stra8P70278 393 aa24.91■■□□□ 1.58
Srf-201ENSMUST00000015749 Iqgap2Q3UQ44 1575 aa24.9■■□□□ 1.58
Srf-201ENSMUST00000015749 Cux2P70298 1426 aa24.88■■□□□ 1.57
Srf-201ENSMUST00000015749 NrdcQ8BHG1 1161 aa24.82■■□□□ 1.56
Srf-201ENSMUST00000015749 Os9Q8K2C7 672 aa24.82■■□□□ 1.56
Srf-201ENSMUST00000015749 Arhgap27A2AB59 869 aa24.8■■□□□ 1.56
Srf-201ENSMUST00000015749 Amer1Q7TS75 1132 aa24.78■■□□□ 1.56
Srf-201ENSMUST00000015749 Ttbk1Q6PCN3 1308 aa24.78■■□□□ 1.56
Srf-201ENSMUST00000015749 Cc2d2aQ8CFW7 1633 aa24.77■■□□□ 1.56
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms