RNA–Protein interactions for RNA: ENSMUST00000004965.6

Chmp2b-201, Transcript of Charged multivesicular body protein 2b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp2b, Length 1,838 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2b-201ENSMUST00000004965 NischQ80TM9 1593 aa29.88■■■□□ 2.37
Chmp2b-201ENSMUST00000004965 Rtl1Q7M732 1744 aa29.55■■■□□ 2.32
Chmp2b-201ENSMUST00000004965 Gm35339A0A140LHH9 1649 aa29.3■■■□□ 2.28
Chmp2b-201ENSMUST00000004965 Rpgrip1Q9EPQ2 1331 aa29.28■■■□□ 2.28
Chmp2b-201ENSMUST00000004965 Abcc9P70170 1546 aa29.23■■■□□ 2.27
Chmp2b-201ENSMUST00000004965 Ccdc180J3QNE4 1664 aa29.01■■■□□ 2.23
Chmp2b-201ENSMUST00000004965 Abcc8B2RUS7 1588 aa28.19■■■□□ 2.1
Chmp2b-201ENSMUST00000004965 Rhox8Q6VSS7 320 aa28.07■■■□□ 2.08
Chmp2b-201ENSMUST00000004965 Acin1Q9JIX8 1338 aaKnown RBP28.03■■■□□ 2.08
Chmp2b-201ENSMUST00000004965 Zcchc6Q5BLK4 1491 aaKnown RBP27.86■■■□□ 2.05
Chmp2b-201ENSMUST00000004965 Dcaf1Q80TR8 1506 aa27.58■■■□□ 2.01
Chmp2b-201ENSMUST00000004965 HrcG5E8J6 738 aa27.31■■□□□ 1.96
Chmp2b-201ENSMUST00000004965 Pcgf6Q99NA9 353 aa27.23■■□□□ 1.95
Chmp2b-201ENSMUST00000004965 Trim41Q5NCC3 630 aa26.8■■□□□ 1.88
Chmp2b-201ENSMUST00000004965 Ehmt2Q9Z148 1263 aaKnown RBP26.52■■□□□ 1.84
Chmp2b-201ENSMUST00000004965 ScribQ80U72 1612 aa26.52■■□□□ 1.84
Chmp2b-201ENSMUST00000004965 Las1lA2BE28 776 aaKnown RBP26.37■■□□□ 1.81
Chmp2b-201ENSMUST00000004965 Supt5hO55201 1082 aaKnown RBP26.35■■□□□ 1.81
Chmp2b-201ENSMUST00000004965 Rb1cc1Q9ESK9 1588 aa26.26■■□□□ 1.8
Chmp2b-201ENSMUST00000004965 Cep164Q5DU05 1446 aa26.22■■□□□ 1.79
Chmp2b-201ENSMUST00000004965 Neurod1Q60867 357 aa26.17■■□□□ 1.78
Chmp2b-201ENSMUST00000004965 Baz1aO88379 1555 aa26.1■■□□□ 1.77
Chmp2b-201ENSMUST00000004965 Myt1Q8CFC2 1127 aa25.95■■□□□ 1.74
Chmp2b-201ENSMUST00000004965 NefmP08553 848 aa25.94■■□□□ 1.74
Chmp2b-201ENSMUST00000004965 Cngb1E1AZ71 1325 aa25.9■■□□□ 1.74
Chmp2b-201ENSMUST00000004965 Ccdc136Q3TVA9 1136 aa25.83■■□□□ 1.73
Chmp2b-201ENSMUST00000004965 Kdm5dQ62240 1548 aa25.81■■□□□ 1.72
Chmp2b-201ENSMUST00000004965 Anks4bQ8K3X6 423 aa25.77■■□□□ 1.72
Chmp2b-201ENSMUST00000004965 NacadQ5SWP3 1504 aa25.75■■□□□ 1.71
Chmp2b-201ENSMUST00000004965 Crybg2B7ZCC2 1516 aa25.64■■□□□ 1.7
Chmp2b-201ENSMUST00000004965 Smarca2Q6DIC0 1577 aa25.61■■□□□ 1.69
Chmp2b-201ENSMUST00000004965 1700123L14RikQ3V2K7 440 aa25.54■■□□□ 1.68
Chmp2b-201ENSMUST00000004965 CenpbP27790 599 aa25.47■■□□□ 1.67
Chmp2b-201ENSMUST00000004965 Sall2Q9QX96 1004 aa25.45■■□□□ 1.66
Chmp2b-201ENSMUST00000004965 Zeb1Q64318 1117 aa25.44■■□□□ 1.66
Chmp2b-201ENSMUST00000004965 Aplp2Q06335 707 aa25.43■■□□□ 1.66
Chmp2b-201ENSMUST00000004965 Mier1Q5UAK0 511 aa25.33■■□□□ 1.65
Chmp2b-201ENSMUST00000004965 Rsf1E9PWW9 1441 aaKnown RBP25.27■■□□□ 1.64
Chmp2b-201ENSMUST00000004965 Csrnp3P59055 597 aa25.24■■□□□ 1.63
Chmp2b-201ENSMUST00000004965 Sycp2Q9CUU3 1500 aa25.21■■□□□ 1.63
Chmp2b-201ENSMUST00000004965 Cdk11bP24788 784 aaKnown RBP25.09■■□□□ 1.61
Chmp2b-201ENSMUST00000004965 ClspnQ80YR7 1315 aa25.06■■□□□ 1.6
Chmp2b-201ENSMUST00000004965 Golga3P55937 1487 aa25■■□□□ 1.59
Chmp2b-201ENSMUST00000004965 Brd4Q9ESU6 1400 aaKnown RBP24.98■■□□□ 1.59
Chmp2b-201ENSMUST00000004965 Chic1Q8CBW7 227 aa24.97■■□□□ 1.59
Chmp2b-201ENSMUST00000004965 Nop58Q6DFW4 536 aaKnown RBP24.96■■□□□ 1.59
Chmp2b-201ENSMUST00000004965 Ccdc88bQ4QRL3 1481 aa24.92■■□□□ 1.58
Chmp2b-201ENSMUST00000004965 Gab3Q8BSM5 595 aa24.77■■□□□ 1.56
Chmp2b-201ENSMUST00000004965 Wdr66E9Q743 1299 aa24.76■■□□□ 1.55
Chmp2b-201ENSMUST00000004965 Aebp2Q9Z248 504 aaKnown RBP24.76■■□□□ 1.55
Chmp2b-201ENSMUST00000004965 BicraF8VPZ9 1578 aa24.74■■□□□ 1.55
Chmp2b-201ENSMUST00000004965 Top2bQ64511 1612 aa24.71■■□□□ 1.55
Chmp2b-201ENSMUST00000004965 Rapgef2Q8CHG7 1496 aa24.6■■□□□ 1.53
Chmp2b-201ENSMUST00000004965 DiexfQ8BTT6 772 aaKnown RBP24.58■■□□□ 1.53
Chmp2b-201ENSMUST00000004965 Tnnt3Q9QZ47 272 aa24.56■■□□□ 1.52
Chmp2b-201ENSMUST00000004965 Synj1Q8CHC4 1574 aa24.56■■□□□ 1.52
Chmp2b-201ENSMUST00000004965 TonslQ6NZL6 1363 aa24.53■■□□□ 1.52
Chmp2b-201ENSMUST00000004965 Cecr2E9Q2Z1 1453 aa24.39■■□□□ 1.5
Chmp2b-201ENSMUST00000004965 UbtfP25976 765 aaKnown RBP24.38■■□□□ 1.49
Chmp2b-201ENSMUST00000004965 CftrP26361 1476 aa24.35■■□□□ 1.49
Chmp2b-201ENSMUST00000004965 Bcl11aQ9QYE3 773 aa24.34■■□□□ 1.49
Chmp2b-201ENSMUST00000004965 Cttnbp2B9EJA2 1648 aa24.32■■□□□ 1.48
Chmp2b-201ENSMUST00000004965 Ncapd3Q6ZQK0 1506 aa24.31■■□□□ 1.48
Chmp2b-201ENSMUST00000004965 Top2aQ01320 1528 aaKnown RBP24.3■■□□□ 1.48
Chmp2b-201ENSMUST00000004965 Cep162Q6ZQ06 1403 aa24.26■■□□□ 1.47
Chmp2b-201ENSMUST00000004965 Fmn1Q05860 1466 aa24.23■■□□□ 1.47
Chmp2b-201ENSMUST00000004965 Cc2d2aQ8CFW7 1633 aa24.22■■□□□ 1.47
Chmp2b-201ENSMUST00000004965 Rtl5Q5DTT4 599 aa24.22■■□□□ 1.47
Chmp2b-201ENSMUST00000004965 Fam71e1A1L3C1 212 aa24.19■■□□□ 1.46
Chmp2b-201ENSMUST00000004965 Eif4g1Q6NZJ6 1600 aaKnown RBP24.18■■□□□ 1.46
Chmp2b-201ENSMUST00000004965 Gm38655A0A286YDK6 273 aa24.12■■□□□ 1.45
Chmp2b-201ENSMUST00000004965 Kdm5bQ80Y84 1544 aa24.07■■□□□ 1.44
Chmp2b-201ENSMUST00000004965 Hnrnpul2Q00PI9 745 aaKnown RBP24.07■■□□□ 1.44
Chmp2b-201ENSMUST00000004965 Anp32aO35381 247 aa24.05■■□□□ 1.44
Chmp2b-201ENSMUST00000004965 Stra8P70278 393 aa24.03■■□□□ 1.44
Chmp2b-201ENSMUST00000004965 TchhA0A0B4J1F9 1599 aa23.97■■□□□ 1.43
Chmp2b-201ENSMUST00000004965 Clip1Q922J3 1391 aa23.95■■□□□ 1.42
Chmp2b-201ENSMUST00000004965 Esf1Q3V1V3 845 aaKnown RBP23.94■■□□□ 1.42
Chmp2b-201ENSMUST00000004965 Smarca4Q3TKT4 1613 aaKnown RBP23.94■■□□□ 1.42
Chmp2b-201ENSMUST00000004965 Ppargc1bQ8VHJ7 1014 aa23.94■■□□□ 1.42
Chmp2b-201ENSMUST00000004965 SafbD3YXK2 937 aaKnown RBP23.88■■□□□ 1.41
Chmp2b-201ENSMUST00000004965 Pelp1Q9DBD5 1123 aaKnown RBP23.87■■□□□ 1.41
Chmp2b-201ENSMUST00000004965 Znf710Q3U288 666 aa23.86■■□□□ 1.41
Chmp2b-201ENSMUST00000004965 Ccdc18Q640L5 1455 aa23.85■■□□□ 1.41
Chmp2b-201ENSMUST00000004965 Pds5bQ4VA53 1446 aaKnown RBP23.85■■□□□ 1.41
Chmp2b-201ENSMUST00000004965 Atad2bE9Q166 1460 aaKnown RBP23.79■■□□□ 1.4
Chmp2b-201ENSMUST00000004965 Rpap1Q80TE0 1409 aa23.79■■□□□ 1.4
Chmp2b-201ENSMUST00000004965 Mapk8ip2Q9ERE9 830 aa23.79■■□□□ 1.4
Chmp2b-201ENSMUST00000004965 UacaQ8CGB3 1411 aa23.73■■□□□ 1.39
Chmp2b-201ENSMUST00000004965 Baz1bQ9Z277 1479 aa23.7■■□□□ 1.39
Chmp2b-201ENSMUST00000004965 Arhgef5E9Q7D5 1581 aa23.7■■□□□ 1.38
Chmp2b-201ENSMUST00000004965 Iqgap2Q3UQ44 1575 aa23.69■■□□□ 1.38
Chmp2b-201ENSMUST00000004965 Myt1lP97500 1187 aa23.66■■□□□ 1.38
Chmp2b-201ENSMUST00000004965 Eea1Q8BL66 1411 aa23.66■■□□□ 1.38
Chmp2b-201ENSMUST00000004965 Plekhg3Q4VAC9 1341 aa23.66■■□□□ 1.38
Chmp2b-201ENSMUST00000004965 Arap1Q4LDD4 1452 aa23.64■■□□□ 1.38
Chmp2b-201ENSMUST00000004965 Camsap2Q8C1B1 1461 aa23.63■■□□□ 1.37
Chmp2b-201ENSMUST00000004965 TnnQ80Z71 1560 aa23.62■■□□□ 1.37
Chmp2b-201ENSMUST00000004965 Arhgap35Q91YM2 1499 aa23.61■■□□□ 1.37
Chmp2b-201ENSMUST00000004965 NrkQ9R0G8 1455 aa23.59■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 92.1 ms