RNA–Protein interactions for RNA: ENSMUST00000002444.13

Rfx2-201, Transcript of DNA-binding protein RFX2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rfx2, Length 3,353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2-201ENSMUST00000002444 Rhox8Q6VSS7 320 aa17.62■□□□□ 0.41
Rfx2-201ENSMUST00000002444 NischQ80TM9 1593 aa17.53■□□□□ 0.4
Rfx2-201ENSMUST00000002444 Abcc9P70170 1546 aa16.8■□□□□ 0.28
Rfx2-201ENSMUST00000002444 Ehmt2Q9Z148 1263 aaKnown RBP16.57■□□□□ 0.24
Rfx2-201ENSMUST00000002444 Gm35339A0A140LHH9 1649 aa16.42■□□□□ 0.22
Rfx2-201ENSMUST00000002444 Abcc8B2RUS7 1588 aa16.41■□□□□ 0.22
Rfx2-201ENSMUST00000002444 Ccdc136Q3TVA9 1136 aa16.26■□□□□ 0.19
Rfx2-201ENSMUST00000002444 Rpgrip1Q9EPQ2 1331 aa16.17■□□□□ 0.18
Rfx2-201ENSMUST00000002444 Ccdc180J3QNE4 1664 aa16.16■□□□□ 0.18
Rfx2-201ENSMUST00000002444 Rtl1Q7M732 1744 aa16.13■□□□□ 0.17
Rfx2-201ENSMUST00000002444 Acin1Q9JIX8 1338 aaKnown RBP15.96■□□□□ 0.14
Rfx2-201ENSMUST00000002444 Trim41Q5NCC3 630 aa15.8■□□□□ 0.12
Rfx2-201ENSMUST00000002444 HrcG5E8J6 738 aa15.69■□□□□ 0.1
Rfx2-201ENSMUST00000002444 Zcchc6Q5BLK4 1491 aaKnown RBP15.66■□□□□ 0.1
Rfx2-201ENSMUST00000002444 Pcgf6Q99NA9 353 aa15.62■□□□□ 0.09
Rfx2-201ENSMUST00000002444 Gab3Q8BSM5 595 aa15.62■□□□□ 0.09
Rfx2-201ENSMUST00000002444 Cngb1E1AZ71 1325 aa15.54■□□□□ 0.08
Rfx2-201ENSMUST00000002444 Zeb1Q64318 1117 aa15.47■□□□□ 0.07
Rfx2-201ENSMUST00000002444 Supt5hO55201 1082 aaKnown RBP15.41■□□□□ 0.06
Rfx2-201ENSMUST00000002444 Dcaf1Q80TR8 1506 aa15.4■□□□□ 0.06
Rfx2-201ENSMUST00000002444 Rb1cc1Q9ESK9 1588 aa15.39■□□□□ 0.05
Rfx2-201ENSMUST00000002444 ScribQ80U72 1612 aa15.2■□□□□ 0.02
Rfx2-201ENSMUST00000002444 Esf1Q3V1V3 845 aaKnown RBP15.2■□□□□ 0.02
Rfx2-201ENSMUST00000002444 Chic1Q8CBW7 227 aa15.19■□□□□ 0.02
Rfx2-201ENSMUST00000002444 Kdm5dQ62240 1548 aa15.11■□□□□ 0.01
Rfx2-201ENSMUST00000002444 Baz1aO88379 1555 aa15.1■□□□□ 0.01
Rfx2-201ENSMUST00000002444 Wdr66E9Q743 1299 aa15.07■□□□□ 0
Rfx2-201ENSMUST00000002444 Cep164Q5DU05 1446 aa15.06■□□□□ 0
Rfx2-201ENSMUST00000002444 UbtfP25976 765 aaKnown RBP15.05■□□□□ 0
Rfx2-201ENSMUST00000002444 Mier1Q5UAK0 511 aa15.05■□□□□ 0
Rfx2-201ENSMUST00000002444 Neurod1Q60867 357 aa15.03■□□□□ -0
Rfx2-201ENSMUST00000002444 Ppargc1bQ8VHJ7 1014 aa15.03■□□□□ -0
Rfx2-201ENSMUST00000002444 Myt1lP97500 1187 aa15□□□□□ -0.01
Rfx2-201ENSMUST00000002444 NacadQ5SWP3 1504 aa14.96□□□□□ -0.01
Rfx2-201ENSMUST00000002444 NefmP08553 848 aa14.95□□□□□ -0.02
Rfx2-201ENSMUST00000002444 Sall2Q9QX96 1004 aa14.91□□□□□ -0.02
Rfx2-201ENSMUST00000002444 Rsf1E9PWW9 1441 aaKnown RBP14.91□□□□□ -0.02
Rfx2-201ENSMUST00000002444 Las1lA2BE28 776 aaKnown RBP14.86□□□□□ -0.03
Rfx2-201ENSMUST00000002444 Npm2Q80W85 207 aa14.79□□□□□ -0.04
Rfx2-201ENSMUST00000002444 Ccdc88bQ4QRL3 1481 aa14.77□□□□□ -0.04
Rfx2-201ENSMUST00000002444 Brd4Q9ESU6 1400 aaKnown RBP14.7□□□□□ -0.06
Rfx2-201ENSMUST00000002444 Smarca2Q6DIC0 1577 aa14.69□□□□□ -0.06
Rfx2-201ENSMUST00000002444 Aebp2Q9Z248 504 aaKnown RBP14.67□□□□□ -0.06
Rfx2-201ENSMUST00000002444 Csrnp3P59055 597 aa14.64□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Cecr2E9Q2Z1 1453 aa14.63□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Plekhg3Q4VAC9 1341 aa14.62□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Golga3P55937 1487 aa14.62□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Cdk11bP24788 784 aaKnown RBP14.6□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Nop58Q6DFW4 536 aaKnown RBP14.6□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Sycp2Q9CUU3 1500 aa14.59□□□□□ -0.07
Rfx2-201ENSMUST00000002444 Gm38655A0A286YDK6 273 aa14.58□□□□□ -0.08
Rfx2-201ENSMUST00000002444 Ap3b1Q9Z1T1 1105 aa14.57□□□□□ -0.08
Rfx2-201ENSMUST00000002444 Il27Q8K3I6 234 aa14.54□□□□□ -0.08
Rfx2-201ENSMUST00000002444 TonslQ6NZL6 1363 aa14.49□□□□□ -0.09
Rfx2-201ENSMUST00000002444 Eid3Q3V124 375 aa14.48□□□□□ -0.09
Rfx2-201ENSMUST00000002444 1700123L14RikQ3V2K7 440 aa14.48□□□□□ -0.09
Rfx2-201ENSMUST00000002444 Crybg2B7ZCC2 1516 aa14.48□□□□□ -0.09
Rfx2-201ENSMUST00000002444 Anks4bQ8K3X6 423 aa14.47□□□□□ -0.09
Rfx2-201ENSMUST00000002444 ClspnQ80YR7 1315 aa14.45□□□□□ -0.1
Rfx2-201ENSMUST00000002444 Synj1Q8CHC4 1574 aa14.44□□□□□ -0.1
Rfx2-201ENSMUST00000002444 Mapk8ip2Q9ERE9 830 aa14.43□□□□□ -0.1
Rfx2-201ENSMUST00000002444 Clip1Q922J3 1391 aa14.36□□□□□ -0.11
Rfx2-201ENSMUST00000002444 CftrP26361 1476 aa14.34□□□□□ -0.11
Rfx2-201ENSMUST00000002444 CenpbP27790 599 aa14.31□□□□□ -0.12
Rfx2-201ENSMUST00000002444 Fam50aQ9WV03 339 aaKnown RBP14.28□□□□□ -0.12
Rfx2-201ENSMUST00000002444 Ube2uB1AUC4 352 aa14.25□□□□□ -0.13
Rfx2-201ENSMUST00000002444 Lmod2Q3UHZ5 550 aa14.23□□□□□ -0.13
Rfx2-201ENSMUST00000002444 Cep162Q6ZQ06 1403 aa14.23□□□□□ -0.13
Rfx2-201ENSMUST00000002444 Slc24a1Q91WD8 1130 aa14.21□□□□□ -0.13
Rfx2-201ENSMUST00000002444 Rapgef2Q8CHG7 1496 aa14.21□□□□□ -0.13
Rfx2-201ENSMUST00000002444 BicraF8VPZ9 1578 aa14.21□□□□□ -0.13
Rfx2-201ENSMUST00000002444 NclP09405 707 aaKnown RBP14.18□□□□□ -0.14
Rfx2-201ENSMUST00000002444 Cc2d2aQ8CFW7 1633 aa14.15□□□□□ -0.14
Rfx2-201ENSMUST00000002444 Aplp2Q06335 707 aa14.13□□□□□ -0.15
Rfx2-201ENSMUST00000002444 SafbD3YXK2 937 aaKnown RBP14.1□□□□□ -0.15
Rfx2-201ENSMUST00000002444 Fmn1Q05860 1466 aa14.09□□□□□ -0.15
Rfx2-201ENSMUST00000002444 Hnrnpul2Q00PI9 745 aaKnown RBP14.06□□□□□ -0.16
Rfx2-201ENSMUST00000002444 Cttnbp2B9EJA2 1648 aa14.04□□□□□ -0.16
Rfx2-201ENSMUST00000002444 Setd5Q5XJV7 1441 aa14.04□□□□□ -0.16
Rfx2-201ENSMUST00000002444 Top2bQ64511 1612 aa14.03□□□□□ -0.16
Rfx2-201ENSMUST00000002444 Smarca4Q3TKT4 1613 aaKnown RBP14□□□□□ -0.17
Rfx2-201ENSMUST00000002444 BlmO88700 1416 aa13.99□□□□□ -0.17
Rfx2-201ENSMUST00000002444 Eea1Q8BL66 1411 aa13.96□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Top2aQ01320 1528 aaKnown RBP13.95□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Kif15Q6P9L6 1387 aa13.94□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Tnnt3Q9QZ47 272 aa13.94□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Eif5bQ05D44 1216 aaKnown RBP13.93□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Npm1Q61937 292 aaKnown RBP13.93□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Fam71e1A1L3C1 212 aa13.92□□□□□ -0.18
Rfx2-201ENSMUST00000002444 Ubl4bQ9CQ84 188 aa13.89□□□□□ -0.19
Rfx2-201ENSMUST00000002444 Hspa5P20029 655 aaKnown RBP13.88□□□□□ -0.19
Rfx2-201ENSMUST00000002444 Chic2Q9D9G3 165 aa13.88□□□□□ -0.19
Rfx2-201ENSMUST00000002444 Iqgap2Q3UQ44 1575 aa13.87□□□□□ -0.19
Rfx2-201ENSMUST00000002444 Stra8P70278 393 aa13.86□□□□□ -0.19
Rfx2-201ENSMUST00000002444 Ncapd3Q6ZQK0 1506 aa13.86□□□□□ -0.19
Rfx2-201ENSMUST00000002444 PtprkP35822 1457 aa13.85□□□□□ -0.19
Rfx2-201ENSMUST00000002444 Atad2bE9Q166 1460 aaKnown RBP13.82□□□□□ -0.2
Rfx2-201ENSMUST00000002444 Sin3aQ60520 1274 aaKnown RBP13.82□□□□□ -0.2
Rfx2-201ENSMUST00000002444 Pds5bQ4VA53 1446 aaKnown RBP13.81□□□□□ -0.2
Rfx2-201ENSMUST00000002444 Arap1Q4LDD4 1452 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 77.4 ms