RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Rhox8Q6VSS7 320 aa16.99■□□□□ 0.31
Col6a1-201ENSMUST00000001147 NischQ80TM9 1593 aa16.43■□□□□ 0.22
Col6a1-201ENSMUST00000001147 Ehmt2Q9Z148 1263 aaKnown RBP15.74■□□□□ 0.11
Col6a1-201ENSMUST00000001147 Abcc9P70170 1546 aa15.65■□□□□ 0.1
Col6a1-201ENSMUST00000001147 Rpgrip1Q9EPQ2 1331 aa15.56■□□□□ 0.08
Col6a1-201ENSMUST00000001147 Ccdc136Q3TVA9 1136 aa15.53■□□□□ 0.08
Col6a1-201ENSMUST00000001147 Abcc8B2RUS7 1588 aa15.3■□□□□ 0.04
Col6a1-201ENSMUST00000001147 Ccdc180J3QNE4 1664 aa15.23■□□□□ 0.03
Col6a1-201ENSMUST00000001147 Rtl1Q7M732 1744 aa15.15■□□□□ 0.02
Col6a1-201ENSMUST00000001147 Gm35339A0A140LHH9 1649 aa15.12■□□□□ 0.01
Col6a1-201ENSMUST00000001147 Acin1Q9JIX8 1338 aaKnown RBP15.12■□□□□ 0.01
Col6a1-201ENSMUST00000001147 Trim41Q5NCC3 630 aa15.11■□□□□ 0.01
Col6a1-201ENSMUST00000001147 Gab3Q8BSM5 595 aa14.97□□□□□ -0.01
Col6a1-201ENSMUST00000001147 Cngb1E1AZ71 1325 aa14.96□□□□□ -0.01
Col6a1-201ENSMUST00000001147 HrcG5E8J6 738 aa14.93□□□□□ -0.02
Col6a1-201ENSMUST00000001147 Zeb1Q64318 1117 aa14.81□□□□□ -0.04
Col6a1-201ENSMUST00000001147 Esf1Q3V1V3 845 aaKnown RBP14.74□□□□□ -0.05
Col6a1-201ENSMUST00000001147 Pcgf6Q99NA9 353 aa14.74□□□□□ -0.05
Col6a1-201ENSMUST00000001147 Las1lA2BE28 776 aaKnown RBP14.67□□□□□ -0.06
Col6a1-201ENSMUST00000001147 Zcchc6Q5BLK4 1491 aaKnown RBP14.62□□□□□ -0.07
Col6a1-201ENSMUST00000001147 Wdr66E9Q743 1299 aa14.56□□□□□ -0.08
Col6a1-201ENSMUST00000001147 Supt5hO55201 1082 aaKnown RBP14.52□□□□□ -0.09
Col6a1-201ENSMUST00000001147 Myt1lP97500 1187 aa14.47□□□□□ -0.09
Col6a1-201ENSMUST00000001147 UbtfP25976 765 aaKnown RBP14.44□□□□□ -0.1
Col6a1-201ENSMUST00000001147 Dcaf1Q80TR8 1506 aa14.44□□□□□ -0.1
Col6a1-201ENSMUST00000001147 Rb1cc1Q9ESK9 1588 aa14.42□□□□□ -0.1
Col6a1-201ENSMUST00000001147 NefmP08553 848 aa14.39□□□□□ -0.11
Col6a1-201ENSMUST00000001147 Npm2Q80W85 207 aa14.35□□□□□ -0.11
Col6a1-201ENSMUST00000001147 Chic1Q8CBW7 227 aa14.3□□□□□ -0.12
Col6a1-201ENSMUST00000001147 Mier1Q5UAK0 511 aa14.28□□□□□ -0.12
Col6a1-201ENSMUST00000001147 Ppargc1bQ8VHJ7 1014 aa14.24□□□□□ -0.13
Col6a1-201ENSMUST00000001147 Cep164Q5DU05 1446 aa14.21□□□□□ -0.13
Col6a1-201ENSMUST00000001147 Baz1aO88379 1555 aa14.14□□□□□ -0.15
Col6a1-201ENSMUST00000001147 Neurod1Q60867 357 aa14.11□□□□□ -0.15
Col6a1-201ENSMUST00000001147 Kdm5dQ62240 1548 aa14.06□□□□□ -0.16
Col6a1-201ENSMUST00000001147 Sall2Q9QX96 1004 aa14.05□□□□□ -0.16
Col6a1-201ENSMUST00000001147 Myt1Q8CFC2 1127 aa14.05□□□□□ -0.16
Col6a1-201ENSMUST00000001147 Il27Q8K3I6 234 aa14.02□□□□□ -0.17
Col6a1-201ENSMUST00000001147 NacadQ5SWP3 1504 aa14.02□□□□□ -0.17
Col6a1-201ENSMUST00000001147 CenpbP27790 599 aa14.01□□□□□ -0.17
Col6a1-201ENSMUST00000001147 Cdk11bP24788 784 aaKnown RBP14□□□□□ -0.17
Col6a1-201ENSMUST00000001147 Brd4Q9ESU6 1400 aaKnown RBP13.99□□□□□ -0.17
Col6a1-201ENSMUST00000001147 Ap3b1Q9Z1T1 1105 aa13.97□□□□□ -0.17
Col6a1-201ENSMUST00000001147 Nop58Q6DFW4 536 aaKnown RBP13.96□□□□□ -0.17
Col6a1-201ENSMUST00000001147 Rsf1E9PWW9 1441 aaKnown RBP13.95□□□□□ -0.18
Col6a1-201ENSMUST00000001147 Ube2uB1AUC4 352 aa13.95□□□□□ -0.18
Col6a1-201ENSMUST00000001147 Plekhg3Q4VAC9 1341 aa13.93□□□□□ -0.18
Col6a1-201ENSMUST00000001147 ScribQ80U72 1612 aa13.92□□□□□ -0.18
Col6a1-201ENSMUST00000001147 TonslQ6NZL6 1363 aa13.88□□□□□ -0.19
Col6a1-201ENSMUST00000001147 Ccdc88bQ4QRL3 1481 aa13.81□□□□□ -0.2
Col6a1-201ENSMUST00000001147 Golga3P55937 1487 aa13.8□□□□□ -0.2
Col6a1-201ENSMUST00000001147 ClspnQ80YR7 1315 aa13.78□□□□□ -0.2
Col6a1-201ENSMUST00000001147 Csrnp3P59055 597 aa13.78□□□□□ -0.2
Col6a1-201ENSMUST00000001147 Aebp2Q9Z248 504 aaKnown RBP13.78□□□□□ -0.2
Col6a1-201ENSMUST00000001147 Fam50aQ9WV03 339 aaKnown RBP13.77□□□□□ -0.2
Col6a1-201ENSMUST00000001147 Eid3Q3V124 375 aa13.76□□□□□ -0.21
Col6a1-201ENSMUST00000001147 Slc24a1Q91WD8 1130 aa13.73□□□□□ -0.21
Col6a1-201ENSMUST00000001147 Gm38655A0A286YDK6 273 aa13.72□□□□□ -0.21
Col6a1-201ENSMUST00000001147 DiexfQ8BTT6 772 aaKnown RBP13.72□□□□□ -0.21
Col6a1-201ENSMUST00000001147 Pelp1Q9DBD5 1123 aaKnown RBP13.72□□□□□ -0.21
Col6a1-201ENSMUST00000001147 Anks4bQ8K3X6 423 aa13.71□□□□□ -0.21
Col6a1-201ENSMUST00000001147 Clip1Q922J3 1391 aa13.7□□□□□ -0.22
Col6a1-201ENSMUST00000001147 Mapk8ip2Q9ERE9 830 aa13.69□□□□□ -0.22
Col6a1-201ENSMUST00000001147 NclP09405 707 aaKnown RBP13.68□□□□□ -0.22
Col6a1-201ENSMUST00000001147 Smarca2Q6DIC0 1577 aa13.67□□□□□ -0.22
Col6a1-201ENSMUST00000001147 Cecr2E9Q2Z1 1453 aa13.65□□□□□ -0.22
Col6a1-201ENSMUST00000001147 Lmod2Q3UHZ5 550 aa13.64□□□□□ -0.23
Col6a1-201ENSMUST00000001147 Sycp2Q9CUU3 1500 aa13.58□□□□□ -0.24
Col6a1-201ENSMUST00000001147 Crybg2B7ZCC2 1516 aa13.58□□□□□ -0.24
Col6a1-201ENSMUST00000001147 1700123L14RikQ3V2K7 440 aa13.57□□□□□ -0.24
Col6a1-201ENSMUST00000001147 Stra8P70278 393 aa13.53□□□□□ -0.24
Col6a1-201ENSMUST00000001147 Amer1Q7TS75 1132 aa13.53□□□□□ -0.24
Col6a1-201ENSMUST00000001147 Tnnt3Q9QZ47 272 aa13.49□□□□□ -0.25
Col6a1-201ENSMUST00000001147 Synj1Q8CHC4 1574 aa13.48□□□□□ -0.25
Col6a1-201ENSMUST00000001147 CftrP26361 1476 aa13.46□□□□□ -0.26
Col6a1-201ENSMUST00000001147 Eif5bQ05D44 1216 aaKnown RBP13.42□□□□□ -0.26
Col6a1-201ENSMUST00000001147 Aplp2Q06335 707 aa13.42□□□□□ -0.26
Col6a1-201ENSMUST00000001147 Cep162Q6ZQ06 1403 aa13.41□□□□□ -0.26
Col6a1-201ENSMUST00000001147 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Col6a1-201ENSMUST00000001147 Setd5Q5XJV7 1441 aa13.39□□□□□ -0.27
Col6a1-201ENSMUST00000001147 BlmO88700 1416 aa13.37□□□□□ -0.27
Col6a1-201ENSMUST00000001147 Rapgef2Q8CHG7 1496 aa13.32□□□□□ -0.28
Col6a1-201ENSMUST00000001147 Fmn1Q05860 1466 aa13.32□□□□□ -0.28
Col6a1-201ENSMUST00000001147 NrdcQ8BHG1 1161 aa13.29□□□□□ -0.28
Col6a1-201ENSMUST00000001147 Eea1Q8BL66 1411 aa13.29□□□□□ -0.28
Col6a1-201ENSMUST00000001147 Kif15Q6P9L6 1387 aa13.27□□□□□ -0.28
Col6a1-201ENSMUST00000001147 Chic2Q9D9G3 165 aa13.27□□□□□ -0.29
Col6a1-201ENSMUST00000001147 SafbD3YXK2 937 aaKnown RBP13.24□□□□□ -0.29
Col6a1-201ENSMUST00000001147 Hnrnpul2Q00PI9 745 aaKnown RBP13.24□□□□□ -0.29
Col6a1-201ENSMUST00000001147 Ubl4bQ9CQ84 188 aa13.21□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Ttbk1Q6PCN3 1308 aa13.18□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Anp32aO35381 247 aa13.18□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Zbtb7cQ8VCZ7 619 aa13.17□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Fam71e1A1L3C1 212 aa13.15□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Cttnbp2B9EJA2 1648 aa13.15□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Hspa5P20029 655 aaKnown RBP13.15□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Cc2d2aQ8CFW7 1633 aa13.15□□□□□ -0.3
Col6a1-201ENSMUST00000001147 Rtl5Q5DTT4 599 aa13.15□□□□□ -0.31
Col6a1-201ENSMUST00000001147 Ccer2J3QPU5 274 aa13.14□□□□□ -0.31
Col6a1-201ENSMUST00000001147 Calr4Q3TQS0 420 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 288.2 ms