RNA–Protein interactions for RNA: ENSMUST00000000312.11

Cdh1-201, Transcript of Cadherin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdh1, Length 4,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh1-201ENSMUST00000000312 Rhox8Q6VSS7 320 aa17.86■□□□□ 0.45
Cdh1-201ENSMUST00000000312 NischQ80TM9 1593 aa17.13■□□□□ 0.33
Cdh1-201ENSMUST00000000312 Ccdc136Q3TVA9 1136 aa16.23■□□□□ 0.19
Cdh1-201ENSMUST00000000312 Abcc9P70170 1546 aa16.16■□□□□ 0.18
Cdh1-201ENSMUST00000000312 Abcc8B2RUS7 1588 aa15.97■□□□□ 0.15
Cdh1-201ENSMUST00000000312 Esf1Q3V1V3 845 aaKnown RBP15.88■□□□□ 0.13
Cdh1-201ENSMUST00000000312 Gm35339A0A140LHH9 1649 aa15.81■□□□□ 0.12
Cdh1-201ENSMUST00000000312 Cngb1E1AZ71 1325 aa15.79■□□□□ 0.12
Cdh1-201ENSMUST00000000312 Trim41Q5NCC3 630 aa15.71■□□□□ 0.1
Cdh1-201ENSMUST00000000312 Ehmt2Q9Z148 1263 aaKnown RBP15.54■□□□□ 0.08
Cdh1-201ENSMUST00000000312 Gab3Q8BSM5 595 aa15.51■□□□□ 0.07
Cdh1-201ENSMUST00000000312 Zcchc6Q5BLK4 1491 aaKnown RBP15.49■□□□□ 0.07
Cdh1-201ENSMUST00000000312 Zeb1Q64318 1117 aa15.29■□□□□ 0.04
Cdh1-201ENSMUST00000000312 Npm2Q80W85 207 aa15.27■□□□□ 0.03
Cdh1-201ENSMUST00000000312 Myt1lP97500 1187 aa15.2■□□□□ 0.02
Cdh1-201ENSMUST00000000312 Il27Q8K3I6 234 aa15.17■□□□□ 0.02
Cdh1-201ENSMUST00000000312 Rb1cc1Q9ESK9 1588 aa15.01□□□□□ -0.01
Cdh1-201ENSMUST00000000312 NacadQ5SWP3 1504 aa14.99□□□□□ -0.01
Cdh1-201ENSMUST00000000312 Ccdc180J3QNE4 1664 aa14.95□□□□□ -0.02
Cdh1-201ENSMUST00000000312 HrcG5E8J6 738 aa14.93□□□□□ -0.02
Cdh1-201ENSMUST00000000312 Rtl1Q7M732 1744 aa14.88□□□□□ -0.03
Cdh1-201ENSMUST00000000312 Kdm5dQ62240 1548 aa14.84□□□□□ -0.03
Cdh1-201ENSMUST00000000312 Ube2uB1AUC4 352 aa14.79□□□□□ -0.04
Cdh1-201ENSMUST00000000312 Rpgrip1Q9EPQ2 1331 aa14.72□□□□□ -0.05
Cdh1-201ENSMUST00000000312 UbtfP25976 765 aaKnown RBP14.71□□□□□ -0.05
Cdh1-201ENSMUST00000000312 Brd4Q9ESU6 1400 aaKnown RBP14.69□□□□□ -0.06
Cdh1-201ENSMUST00000000312 Baz1aO88379 1555 aa14.68□□□□□ -0.06
Cdh1-201ENSMUST00000000312 Npm1Q61937 292 aaKnown RBP14.68□□□□□ -0.06
Cdh1-201ENSMUST00000000312 Dcaf1Q80TR8 1506 aa14.65□□□□□ -0.06
Cdh1-201ENSMUST00000000312 Ap3b1Q9Z1T1 1105 aa14.63□□□□□ -0.07
Cdh1-201ENSMUST00000000312 ScribQ80U72 1612 aa14.62□□□□□ -0.07
Cdh1-201ENSMUST00000000312 Chic1Q8CBW7 227 aa14.58□□□□□ -0.08
Cdh1-201ENSMUST00000000312 Ubl4bQ9CQ84 188 aa14.57□□□□□ -0.08
Cdh1-201ENSMUST00000000312 Wdr66E9Q743 1299 aa14.5□□□□□ -0.09
Cdh1-201ENSMUST00000000312 Las1lA2BE28 776 aaKnown RBP14.48□□□□□ -0.09
Cdh1-201ENSMUST00000000312 Sycp2Q9CUU3 1500 aa14.45□□□□□ -0.1
Cdh1-201ENSMUST00000000312 Acin1Q9JIX8 1338 aaKnown RBP14.36□□□□□ -0.11
Cdh1-201ENSMUST00000000312 Fam50aQ9WV03 339 aaKnown RBP14.33□□□□□ -0.11
Cdh1-201ENSMUST00000000312 Lmod2Q3UHZ5 550 aa14.32□□□□□ -0.12
Cdh1-201ENSMUST00000000312 Plekhg3Q4VAC9 1341 aa14.29□□□□□ -0.12
Cdh1-201ENSMUST00000000312 Kif15Q6P9L6 1387 aa14.27□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Cep164Q5DU05 1446 aa14.25□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Ercc6F8VPZ5 1481 aa14.25□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Golga3P55937 1487 aa14.23□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Pds5bQ4VA53 1446 aaKnown RBP14.23□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Cecr2E9Q2Z1 1453 aa14.22□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Ifnlr1Q8CGK5 535 aa14.21□□□□□ -0.13
Cdh1-201ENSMUST00000000312 NefmP08553 848 aa14.21□□□□□ -0.13
Cdh1-201ENSMUST00000000312 Rsf1E9PWW9 1441 aaKnown RBP14.19□□□□□ -0.14
Cdh1-201ENSMUST00000000312 Fkbp15Q6P9Q6 1216 aaKnown RBP14.17□□□□□ -0.14
Cdh1-201ENSMUST00000000312 Crybg2B7ZCC2 1516 aa14.15□□□□□ -0.14
Cdh1-201ENSMUST00000000312 Clip1Q922J3 1391 aa14.09□□□□□ -0.15
Cdh1-201ENSMUST00000000312 Mier1Q5UAK0 511 aa14.08□□□□□ -0.15
Cdh1-201ENSMUST00000000312 Zbtb7cQ8VCZ7 619 aa14.07□□□□□ -0.16
Cdh1-201ENSMUST00000000312 Neurod1Q60867 357 aa14.05□□□□□ -0.16
Cdh1-201ENSMUST00000000312 Smarca2Q6DIC0 1577 aa14.04□□□□□ -0.16
Cdh1-201ENSMUST00000000312 CftrP26361 1476 aa14.04□□□□□ -0.16
Cdh1-201ENSMUST00000000312 Pelp1Q9DBD5 1123 aaKnown RBP14.03□□□□□ -0.16
Cdh1-201ENSMUST00000000312 Atad2bE9Q166 1460 aaKnown RBP14□□□□□ -0.17
Cdh1-201ENSMUST00000000312 Ccdc88bQ4QRL3 1481 aa13.99□□□□□ -0.17
Cdh1-201ENSMUST00000000312 Ccdc18Q640L5 1455 aa13.98□□□□□ -0.17
Cdh1-201ENSMUST00000000312 Ppargc1bQ8VHJ7 1014 aa13.97□□□□□ -0.17
Cdh1-201ENSMUST00000000312 Synj1Q8CHC4 1574 aa13.93□□□□□ -0.18
Cdh1-201ENSMUST00000000312 NclP09405 707 aaKnown RBP13.92□□□□□ -0.18
Cdh1-201ENSMUST00000000312 Slc24a1Q91WD8 1130 aa13.91□□□□□ -0.18
Cdh1-201ENSMUST00000000312 Hnrnpul2Q00PI9 745 aaKnown RBP13.91□□□□□ -0.18
Cdh1-201ENSMUST00000000312 Smarca4Q3TKT4 1613 aaKnown RBP13.9□□□□□ -0.18
Cdh1-201ENSMUST00000000312 Setd5Q5XJV7 1441 aa13.89□□□□□ -0.19
Cdh1-201ENSMUST00000000312 Eid3Q3V124 375 aa13.89□□□□□ -0.19
Cdh1-201ENSMUST00000000312 Phldb1Q6PDH0 1371 aaKnown RBP13.87□□□□□ -0.19
Cdh1-201ENSMUST00000000312 Cux2P70298 1426 aa13.85□□□□□ -0.19
Cdh1-201ENSMUST00000000312 BlmO88700 1416 aa13.84□□□□□ -0.19
Cdh1-201ENSMUST00000000312 TonslQ6NZL6 1363 aa13.83□□□□□ -0.19
Cdh1-201ENSMUST00000000312 Fmn1Q05860 1466 aa13.82□□□□□ -0.2
Cdh1-201ENSMUST00000000312 Arhgap27A2AB59 869 aa13.82□□□□□ -0.2
Cdh1-201ENSMUST00000000312 Os9Q8K2C7 672 aa13.82□□□□□ -0.2
Cdh1-201ENSMUST00000000312 Plppr3Q7TPB0 716 aa13.8□□□□□ -0.2
Cdh1-201ENSMUST00000000312 Chic2Q9D9G3 165 aa13.8□□□□□ -0.2
Cdh1-201ENSMUST00000000312 Iqgap2Q3UQ44 1575 aa13.79□□□□□ -0.2
Cdh1-201ENSMUST00000000312 BicraF8VPZ9 1578 aa13.77□□□□□ -0.21
Cdh1-201ENSMUST00000000312 Ttbk1Q6PCN3 1308 aa13.76□□□□□ -0.21
Cdh1-201ENSMUST00000000312 Cttnbp2B9EJA2 1648 aa13.71□□□□□ -0.21
Cdh1-201ENSMUST00000000312 Erich6D3Z6S9 713 aa13.71□□□□□ -0.22
Cdh1-201ENSMUST00000000312 Eea1Q8BL66 1411 aa13.7□□□□□ -0.22
Cdh1-201ENSMUST00000000312 Zbtb4Q5F293 982 aa13.68□□□□□ -0.22
Cdh1-201ENSMUST00000000312 Gm13697A2AK42 830 aa13.67□□□□□ -0.22
Cdh1-201ENSMUST00000000312 Cep162Q6ZQ06 1403 aa13.67□□□□□ -0.22
Cdh1-201ENSMUST00000000312 Supt5hO55201 1082 aaKnown RBP13.67□□□□□ -0.22
Cdh1-201ENSMUST00000000312 Pcgf6Q99NA9 353 aa13.67□□□□□ -0.22
Cdh1-201ENSMUST00000000312 LrpprcQ6PB66 1392 aaKnown RBP13.62□□□□□ -0.23
Cdh1-201ENSMUST00000000312 Mapk8ip2Q9ERE9 830 aa13.6□□□□□ -0.23
Cdh1-201ENSMUST00000000312 Dhx29Q6PGC1 1365 aaKnown RBP13.59□□□□□ -0.23
Cdh1-201ENSMUST00000000312 Dnajc5bQ9CQ94 199 aa13.59□□□□□ -0.23
Cdh1-201ENSMUST00000000312 Baz1bQ9Z277 1479 aa13.58□□□□□ -0.23
Cdh1-201ENSMUST00000000312 Rapgef2Q8CHG7 1496 aa13.57□□□□□ -0.24
Cdh1-201ENSMUST00000000312 AknaQ80VW7 1404 aa13.55□□□□□ -0.24
Cdh1-201ENSMUST00000000312 Frmpd1A2AKB4 1549 aa13.55□□□□□ -0.24
Cdh1-201ENSMUST00000000312 Atp1b4Q99ME6 356 aa13.54□□□□□ -0.24
Cdh1-201ENSMUST00000000312 Aebp1Q640N1 1128 aa13.54□□□□□ -0.24
Cdh1-201ENSMUST00000000312 Cdk11bP24788 784 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms