RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 TY1A-JR1P0CX74 440 aa3.05□□□□□ -1.92
snR48snR48 TY1A-LR3P0CX75 440 aa3.05□□□□□ -1.92
snR48snR48 TY1A-ML2P0CX76 440 aa3.05□□□□□ -1.92
snR48snR48 DUR3P33413 735 aa3.05□□□□□ -1.92
snR48snR48 ECM23Q02710 187 aa3.05□□□□□ -1.92
snR48snR48 HRK1Q08732 759 aaKnown RBP3.05□□□□□ -1.92
snR48snR48 TY1A-GR1Q12085 440 aa3.05□□□□□ -1.92
snR48snR48 ICT1Q12385 394 aa3.05□□□□□ -1.92
snR48snR48 TY1A-PR3Q6Q5H1 440 aaKnown RBP3.05□□□□□ -1.92
snR48snR48 TY1A-OLQ92392 440 aaKnown RBP3.05□□□□□ -1.92
snR48snR48 RET1P22276 1149 aaKnown RBP3.04□□□□□ -1.92
snR48snR48 UBX7P38349 436 aa3.04□□□□□ -1.92
snR48snR48 UBP3Q01477 912 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
snR48snR48 PUN1Q06991 263 aa3.04□□□□□ -1.92
snR48snR48 AFT2Q08957 416 aa3.04□□□□□ -1.92
snR48snR48 SAP155P43612 1002 aa3.03□□□□□ -1.92
snR48snR48 STU2P46675 888 aa3.03□□□□□ -1.92
snR48snR48 NPL3Q01560 414 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
snR48snR48 YAP7Q08182 245 aa3.03□□□□□ -1.92
snR48snR48 RPB10P22139 70 aa3.02□□□□□ -1.93
snR48snR48 NMD3P38861 518 aaKnown RBP3.02□□□□□ -1.93
snR48snR48 NBA1Q08229 501 aaKnown RBP3.02□□□□□ -1.93
snR48snR48 GPB1Q08886 897 aa3.02□□□□□ -1.93
snR48snR48 MCM5P29496 775 aaKnown RBP3.01□□□□□ -1.93
snR48snR48 RPN1P38764 993 aaKnown RBP3.01□□□□□ -1.93
snR48snR48 SEC26P41810 973 aaKnown RBP3.01□□□□□ -1.93
snR48snR48 VPS62P53285 467 aa3.01□□□□□ -1.93
snR48snR48 YAR028WP39548 234 aa3□□□□□ -1.93
snR48snR48 YLR224WQ05947 369 aa3□□□□□ -1.93
snR48snR48 TMT1P32643 299 aa2.99□□□□□ -1.93
snR48snR48 YER158CP40095 573 aa2.99□□□□□ -1.93
snR48snR48 RSA3Q05942 220 aaKnown RBP2.99□□□□□ -1.93
snR48snR48 GAL10P04397 699 aa2.98□□□□□ -1.93
snR48snR48 SRM1P21827 482 aa2.98□□□□□ -1.93
snR48snR48 YJL045WP47052 634 aa2.98□□□□□ -1.93
snR48snR48 TMN2Q04562 672 aa2.98□□□□□ -1.93
snR48snR48 SLS1P42900 643 aa2.97□□□□□ -1.93
snR48snR48 PBP1P53297 722 aaKnown RBP2.97□□□□□ -1.93
snR48snR48 YAP6Q03935 383 aa2.97□□□□□ -1.93
snR48snR48 HOF1Q05080 669 aa2.97□□□□□ -1.93
snR48snR48 YSC84P32793 468 aa2.96□□□□□ -1.94
snR48snR48 IRC10Q08118 586 aa2.96□□□□□ -1.94
snR48snR48 LSO1Q3E827 93 aa2.96□□□□□ -1.94
snR48snR48 RRN6P32786 894 aa2.95□□□□□ -1.94
snR48snR48 EXO5P38289 585 aa2.95□□□□□ -1.94
snR48snR48 HSE1P38753 452 aa2.95□□□□□ -1.94
snR48snR48 NEM1P38757 446 aa2.95□□□□□ -1.94
snR48snR48 HRR25P29295 494 aaKnown RBP2.94□□□□□ -1.94
snR48snR48 ECM2P38241 364 aaKnown RBP2.94□□□□□ -1.94
snR48snR48 YAF9P53930 226 aa2.94□□□□□ -1.94
snR48snR48 RSC4Q02206 625 aa2.94□□□□□ -1.94
snR48snR48 RCL1Q08096 367 aaPredicted RBP2.94□□□□□ -1.94
snR48snR48 BAP2P38084 609 aa2.93□□□□□ -1.94
snR48snR48 CWC15Q03772 175 aaKnown RBP2.93□□□□□ -1.94
snR48snR48 PMT7Q06644 662 aa2.93□□□□□ -1.94
snR48snR48 NOP12Q08208 459 aaKnown RBP2.93□□□□□ -1.94
snR48snR48 AIM39Q08223 395 aa2.93□□□□□ -1.94
snR48snR48 HMI1Q12039 706 aa2.93□□□□□ -1.94
snR48snR48 CMP2P14747 604 aa2.92□□□□□ -1.94
snR48snR48 COQ4O13525 335 aa2.91□□□□□ -1.94
snR48snR48 LEU3P08638 886 aa2.91□□□□□ -1.94
snR48snR48 EMC1P25574 760 aa2.91□□□□□ -1.94
snR48snR48 YKL077WP36081 392 aa2.91□□□□□ -1.94
snR48snR48 CCZ1P38273 704 aa2.91□□□□□ -1.94
snR48snR48 SIP5P40210 489 aaKnown RBP2.91□□□□□ -1.94
snR48snR48 RSM24Q03976 319 aa2.91□□□□□ -1.94
snR48snR48 MCH5Q08777 521 aa2.91□□□□□ -1.94
snR48snR48 MDM10P18409 493 aa2.9□□□□□ -1.95
snR48snR48 YUR1P26725 428 aa2.9□□□□□ -1.95
snR48snR48 NOB1Q08444 459 aaKnown RBP2.9□□□□□ -1.95
snR48snR48 LAP2Q10740 671 aa2.9□□□□□ -1.95
snR48snR48 TTI1P36097 1038 aa2.89□□□□□ -1.95
snR48snR48 QNS1P38795 714 aaKnown RBP2.89□□□□□ -1.95
snR48snR48 SPO21Q12411 609 aa2.89□□□□□ -1.95
snR48snR48 PIK1P39104 1066 aa2.88□□□□□ -1.95
snR48snR48 MTR4P47047 1073 aaKnown RBP2.88□□□□□ -1.95
snR48snR48 NUT1P53114 1132 aa2.88□□□□□ -1.95
snR48snR48 SEC5P89102 971 aa2.88□□□□□ -1.95
snR48snR48 COQ11Q05892 277 aa2.88□□□□□ -1.95
snR48snR48 RIB2Q12362 591 aaKnown RBP2.88□□□□□ -1.95
snR48snR48 PLB1P39105 664 aa2.87□□□□□ -1.95
snR48snR48 EXG2P52911 562 aa2.87□□□□□ -1.95
snR48snR48 UTP5Q04177 643 aaKnown RBP2.87□□□□□ -1.95
snR48snR48 PNP1Q05788 311 aa2.87□□□□□ -1.95
snR48snR48 FLP1P03870 423 aa2.86□□□□□ -1.95
snR48snR48 PFK1P16861 987 aaKnown RBP2.86□□□□□ -1.95
snR48snR48 RGT1P32862 1170 aa2.86□□□□□ -1.95
snR48snR48 SHU2P38957 223 aa2.86□□□□□ -1.95
snR48snR48 SIZ1Q04195 904 aa2.86□□□□□ -1.95
snR48snR48 OMS1Q06668 471 aa2.86□□□□□ -1.95
snR48snR48 RSB1Q08417 382 aa2.86□□□□□ -1.95
snR48snR48 SCS3P53012 380 aa2.85□□□□□ -1.95
snR48snR48 SNF5P18480 905 aa2.84□□□□□ -1.95
snR48snR48 MTH1P35198 433 aa2.84□□□□□ -1.95
snR48snR48 RFC5P38251 354 aa2.84□□□□□ -1.95
snR48snR48 XKS1P42826 600 aa2.84□□□□□ -1.95
snR48snR48 STB4P50104 949 aa2.84□□□□□ -1.95
snR48snR48 GLO1P50107 326 aa2.84□□□□□ -1.95
snR48snR48 GTF1P53260 183 aaPredicted RBP2.84□□□□□ -1.95
snR48snR48 TNA1P53322 534 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms