RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B PUP1P25043 261 aa1.97□□□□□ -2.09
snR39BsnR39B CCZ1P38273 704 aa1.97□□□□□ -2.09
snR39BsnR39B SEC26P41810 973 aaKnown RBP1.97□□□□□ -2.09
snR39BsnR39B MCM6P53091 1017 aaKnown RBP1.97□□□□□ -2.09
snR39BsnR39B YAF9P53930 226 aa1.97□□□□□ -2.09
snR39BsnR39B COQ4O13525 335 aa1.96□□□□□ -2.1
snR39BsnR39B CHS7P38843 316 aa1.96□□□□□ -2.1
snR39BsnR39B RVS167P39743 482 aaKnown RBP1.96□□□□□ -2.1
snR39BsnR39B BDF2Q07442 638 aa1.96□□□□□ -2.1
snR39BsnR39B CYC1P00044 109 aaPredicted RBP1.95□□□□□ -2.1
snR39BsnR39B CPS1P27614 576 aa1.95□□□□□ -2.1
snR39BsnR39B OAR1P35731 278 aa1.95□□□□□ -2.1
snR39BsnR39B UBA2P52488 636 aa1.95□□□□□ -2.1
snR39BsnR39B NUT1P53114 1132 aa1.95□□□□□ -2.1
snR39BsnR39B RSA3Q05942 220 aaKnown RBP1.95□□□□□ -2.1
snR39BsnR39B DUS4Q06063 367 aa1.95□□□□□ -2.1
snR39BsnR39B ACK1Q07622 623 aaPredicted RBP1.95□□□□□ -2.1
snR39BsnR39B PPM2Q08282 695 aa1.95□□□□□ -2.1
snR39BsnR39B TY1A-LR4P0C2I8 440 aaKnown RBP1.94□□□□□ -2.1
snR39BsnR39B TY1A-DR6P0CX70 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-ER1P0CX71 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-LR2P0CX72 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-PLP0CX73 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-JR1P0CX74 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-LR3P0CX75 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-ML2P0CX76 440 aa1.94□□□□□ -2.1
snR39BsnR39B CDC20P26309 610 aa1.94□□□□□ -2.1
snR39BsnR39B YSC84P32793 468 aa1.94□□□□□ -2.1
snR39BsnR39B SLS1P42900 643 aa1.94□□□□□ -2.1
snR39BsnR39B IOC3P43596 787 aa1.94□□□□□ -2.1
snR39BsnR39B VPS53P47061 822 aa1.94□□□□□ -2.1
snR39BsnR39B YNL011CP53980 444 aa1.94□□□□□ -2.1
snR39BsnR39B ROT1Q03691 256 aa1.94□□□□□ -2.1
snR39BsnR39B RSM24Q03976 319 aa1.94□□□□□ -2.1
snR39BsnR39B BSC2Q05611 235 aa1.94□□□□□ -2.1
snR39BsnR39B RSB1Q08417 382 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-GR1Q12085 440 aa1.94□□□□□ -2.1
snR39BsnR39B TY1A-PR3Q6Q5H1 440 aaKnown RBP1.94□□□□□ -2.1
snR39BsnR39B TY1A-OLQ92392 440 aaKnown RBP1.94□□□□□ -2.1
snR39BsnR39B FLP1P03870 423 aa1.93□□□□□ -2.1
snR39BsnR39B PMA1P05030 918 aaKnown RBP1.93□□□□□ -2.1
snR39BsnR39B DCG1P32460 244 aa1.93□□□□□ -2.1
snR39BsnR39B LST4P34239 828 aa1.93□□□□□ -2.1
snR39BsnR39B DEF1P35732 738 aaKnown RBP1.93□□□□□ -2.1
snR39BsnR39B EXO5P38289 585 aa1.93□□□□□ -2.1
snR39BsnR39B ATF1P40353 525 aa1.93□□□□□ -2.1
snR39BsnR39B YJL045WP47052 634 aa1.93□□□□□ -2.1
snR39BsnR39B YML083CQ04526 418 aa1.93□□□□□ -2.1
snR39BsnR39B TMA10Q06177 86 aa1.93□□□□□ -2.1
snR39BsnR39B GPB1Q08886 897 aa1.93□□□□□ -2.1
snR39BsnR39B SSA4P22202 642 aaKnown RBP1.92□□□□□ -2.1
snR39BsnR39B VMA4P22203 233 aaKnown RBP1.92□□□□□ -2.1
snR39BsnR39B NEM1P38757 446 aa1.92□□□□□ -2.1
snR39BsnR39B QNS1P38795 714 aaKnown RBP1.92□□□□□ -2.1
snR39BsnR39B NMD3P38861 518 aaKnown RBP1.92□□□□□ -2.1
snR39BsnR39B PIK1P39104 1066 aa1.92□□□□□ -2.1
snR39BsnR39B STU2P46675 888 aa1.92□□□□□ -2.1
snR39BsnR39B RKM2Q03942 479 aa1.92□□□□□ -2.1
snR39BsnR39B RPP2AP05319 106 aaKnown RBP1.91□□□□□ -2.1
snR39BsnR39B KIN2P13186 1147 aaKnown RBP1.91□□□□□ -2.1
snR39BsnR39B BAP2P38084 609 aa1.91□□□□□ -2.1
snR39BsnR39B MOH1P38191 138 aa1.91□□□□□ -2.1
snR39BsnR39B RFC5P38251 354 aa1.91□□□□□ -2.1
snR39BsnR39B XKS1P42826 600 aa1.91□□□□□ -2.1
snR39BsnR39B PHO23P50947 330 aa1.91□□□□□ -2.1
snR39BsnR39B TNA1P53322 534 aa1.91□□□□□ -2.1
snR39BsnR39B CDC55Q00362 526 aa1.91□□□□□ -2.1
snR39BsnR39B NOG1Q02892 647 aaKnown RBP1.91□□□□□ -2.1
snR39BsnR39B HOS3Q02959 697 aaKnown RBP1.91□□□□□ -2.1
snR39BsnR39B UTP5Q04177 643 aaKnown RBP1.91□□□□□ -2.1
snR39BsnR39B NOB1Q08444 459 aaKnown RBP1.91□□□□□ -2.1
snR39BsnR39B CUE2P36075 443 aaKnown RBP1.9□□□□□ -2.11
snR39BsnR39B MSS4P38994 779 aa1.9□□□□□ -2.11
snR39BsnR39B BOL3P39724 118 aa1.9□□□□□ -2.11
snR39BsnR39B KIN4Q01919 800 aa1.9□□□□□ -2.11
snR39BsnR39B PLB2Q03674 706 aa1.9□□□□□ -2.11
snR39BsnR39B NOP12Q08208 459 aaKnown RBP1.9□□□□□ -2.11
snR39BsnR39B AIM39Q08223 395 aa1.9□□□□□ -2.11
snR39BsnR39B GAL10P04397 699 aa1.89□□□□□ -2.11
snR39BsnR39B SCP160P06105 1222 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
snR39BsnR39B CMP2P14747 604 aa1.89□□□□□ -2.11
snR39BsnR39B RPN3P40016 523 aaKnown RBP1.89□□□□□ -2.11
snR39BsnR39B VPS62P53285 467 aa1.89□□□□□ -2.11
snR39BsnR39B YLR224WQ05947 369 aa1.89□□□□□ -2.11
snR39BsnR39B INP54Q08227 384 aaKnown RBP1.89□□□□□ -2.11
snR39BsnR39B ADD66P36040 267 aa1.88□□□□□ -2.11
snR39BsnR39B GLO3P38682 493 aaKnown RBP1.88□□□□□ -2.11
snR39BsnR39B ACF4P47129 309 aa1.88□□□□□ -2.11
snR39BsnR39B YNR063WP53749 607 aa1.88□□□□□ -2.11
snR39BsnR39B TRS120Q04183 1289 aa1.88□□□□□ -2.11
snR39BsnR39B CDC6P09119 513 aa1.87□□□□□ -2.11
snR39BsnR39B MSH3P25336 1018 aa1.87□□□□□ -2.11
snR39BsnR39B QRI1P43123 477 aaKnown RBP1.87□□□□□ -2.11
snR39BsnR39B MON1P53129 644 aa1.87□□□□□ -2.11
snR39BsnR39B TIM44Q01852 431 aa1.87□□□□□ -2.11
snR39BsnR39B YAP6Q03935 383 aa1.87□□□□□ -2.11
snR39BsnR39B NOC3Q07896 663 aaPredicted RBP1.87□□□□□ -2.11
snR39BsnR39B MNL2Q12205 849 aa1.87□□□□□ -2.11
snR39BsnR39B KAR2P16474 682 aaKnown RBP1.86□□□□□ -2.11
snR39BsnR39B EMC1P25574 760 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 102 ms