RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C ISR1Q06098 443 aaKnown RBP6.75□□□□□ -1.33
VPS4YPR173C YCG1Q06680 1035 aa6.75□□□□□ -1.33
VPS4YPR173C ATG20Q07528 640 aa6.75□□□□□ -1.33
VPS4YPR173C GIN4Q12263 1142 aa6.75□□□□□ -1.33
VPS4YPR173C GAL2P13181 574 aa6.74□□□□□ -1.33
VPS4YPR173C MSH1P25846 959 aa6.74□□□□□ -1.33
VPS4YPR173C FBP26P32604 452 aa6.74□□□□□ -1.33
VPS4YPR173C MRT4P33201 236 aaKnown RBP6.74□□□□□ -1.33
VPS4YPR173C OSH3P38713 996 aaKnown RBP6.74□□□□□ -1.33
VPS4YPR173C FYV10P40492 516 aa6.74□□□□□ -1.33
VPS4YPR173C XKS1P42826 600 aa6.74□□□□□ -1.33
VPS4YPR173C PIB2P53191 635 aa6.74□□□□□ -1.33
VPS4YPR173C SRC1Q03707 834 aa6.74□□□□□ -1.33
VPS4YPR173C YKL068W-AQ3E826 78 aa6.74□□□□□ -1.33
VPS4YPR173C RAS1P01119 309 aa6.73□□□□□ -1.33
VPS4YPR173C RNA1P11745 407 aaKnown RBP6.73□□□□□ -1.33
VPS4YPR173C PGI1P12709 554 aaKnown RBP6.73□□□□□ -1.33
VPS4YPR173C OPI1P21957 404 aa6.73□□□□□ -1.33
VPS4YPR173C SRP40P32583 406 aaPredicted RBP6.73□□□□□ -1.33
VPS4YPR173C CIC1P38779 376 aaKnown RBP6.73□□□□□ -1.33
VPS4YPR173C NOC2P39744 710 aaKnown RBP6.73□□□□□ -1.33
VPS4YPR173C BUD6P41697 788 aa6.73□□□□□ -1.33
VPS4YPR173C YGL082WP53155 381 aa6.73□□□□□ -1.33
VPS4YPR173C VMS1Q04311 632 aaKnown RBP6.73□□□□□ -1.33
VPS4YPR173C SML1Q04964 104 aa6.73□□□□□ -1.33
VPS4YPR173C YLR407WQ06070 228 aa6.73□□□□□ -1.33
VPS4YPR173C SUP35P05453 685 aaKnown RBP6.72□□□□□ -1.33
VPS4YPR173C RRP1P35178 278 aaPredicted RBP6.72□□□□□ -1.33
VPS4YPR173C VPS41P38959 992 aa6.72□□□□□ -1.33
VPS4YPR173C HAL5P38970 855 aaKnown RBP6.72□□□□□ -1.33
VPS4YPR173C VPS75P53853 264 aa6.72□□□□□ -1.33
VPS4YPR173C TLG2Q08144 397 aa6.72□□□□□ -1.33
VPS4YPR173C PGA3Q12746 312 aaKnown RBP6.72□□□□□ -1.33
VPS4YPR173C RPL22AP05749 121 aaKnown RBP6.71□□□□□ -1.34
VPS4YPR173C PET123P17558 318 aa6.71□□□□□ -1.34
VPS4YPR173C PEP3P27801 918 aa6.71□□□□□ -1.34
VPS4YPR173C PRP45P28004 379 aaPredicted RBP6.71□□□□□ -1.34
VPS4YPR173C RTT107P38850 1070 aa6.71□□□□□ -1.34
VPS4YPR173C MSB3P48566 633 aaPredicted RBP6.71□□□□□ -1.34
VPS4YPR173C YGL140CP53120 1219 aa6.71□□□□□ -1.34
VPS4YPR173C VPS64Q03944 604 aa6.71□□□□□ -1.34
VPS4YPR173C CTI6Q08923 506 aa6.71□□□□□ -1.34
VPS4YPR173C TCB1Q12466 1186 aa6.71□□□□□ -1.34
VPS4YPR173C PHO87P25360 923 aa6.7□□□□□ -1.34
VPS4YPR173C DPB3P27344 201 aa6.7□□□□□ -1.34
VPS4YPR173C MKS1P34072 584 aa6.7□□□□□ -1.34
VPS4YPR173C UBX7P38349 436 aa6.7□□□□□ -1.34
VPS4YPR173C MSH4P40965 878 aaPredicted RBP6.7□□□□□ -1.34
VPS4YPR173C OSW7P43611 510 aa6.7□□□□□ -1.34
VPS4YPR173C CLA4P48562 842 aa6.7□□□□□ -1.34
VPS4YPR173C MTC5Q03897 1148 aa6.7□□□□□ -1.34
VPS4YPR173C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
VPS4YPR173C YOL087CQ99247 1116 aa6.7□□□□□ -1.34
VPS4YPR173C HAP4P14064 554 aa6.69□□□□□ -1.34
VPS4YPR173C MIP1P15801 1254 aa6.69□□□□□ -1.34
VPS4YPR173C OSM1P21375 501 aaKnown RBP6.69□□□□□ -1.34
VPS4YPR173C PCH2P38126 564 aa6.69□□□□□ -1.34
VPS4YPR173C YBL086CP38177 466 aa6.69□□□□□ -1.34
VPS4YPR173C PSY4P38193 441 aa6.69□□□□□ -1.34
VPS4YPR173C MED8P38304 223 aa6.69□□□□□ -1.34
VPS4YPR173C CAJ1P39101 391 aa6.69□□□□□ -1.34
VPS4YPR173C DSN1P40568 576 aa6.69□□□□□ -1.34
VPS4YPR173C APT1P49435 187 aaKnown RBP6.69□□□□□ -1.34
VPS4YPR173C MAL13P53338 473 aa6.69□□□□□ -1.34
VPS4YPR173C RBA50Q04418 439 aa6.69□□□□□ -1.34
VPS4YPR173C ESF1Q06344 628 aaKnown RBP6.69□□□□□ -1.34
VPS4YPR173C APL4Q12028 832 aa6.69□□□□□ -1.34
VPS4YPR173C PSH1Q12161 406 aa6.69□□□□□ -1.34
VPS4YPR173C CDC4P07834 779 aa6.68□□□□□ -1.34
VPS4YPR173C PHO13P19881 312 aa6.68□□□□□ -1.34
VPS4YPR173C UBC1P21734 215 aaKnown RBP6.68□□□□□ -1.34
VPS4YPR173C CDC15P27636 974 aa6.68□□□□□ -1.34
VPS4YPR173C ECM1P39715 212 aa6.68□□□□□ -1.34
VPS4YPR173C NDC80P40460 691 aa6.68□□□□□ -1.34
VPS4YPR173C ACS2P52910 683 aaKnown RBP6.68□□□□□ -1.34
VPS4YPR173C ALF1P53904 254 aa6.68□□□□□ -1.34
VPS4YPR173C FAR11P53917 953 aa6.68□□□□□ -1.34
VPS4YPR173C ISU1Q03020 165 aa6.68□□□□□ -1.34
VPS4YPR173C RMT2Q03305 412 aa6.68□□□□□ -1.34
VPS4YPR173C HDA3Q06623 655 aa6.68□□□□□ -1.34
VPS4YPR173C SSP2Q08646 371 aa6.68□□□□□ -1.34
VPS4YPR173C TSC13Q99190 310 aa6.68□□□□□ -1.34
VPS4YPR173C SSK22P25390 1331 aaPredicted RBP6.68□□□□□ -1.34
VPS4YPR173C HSP82P02829 709 aaKnown RBP6.67□□□□□ -1.34
VPS4YPR173C HXK1P04806 485 aaKnown RBP6.67□□□□□ -1.34
VPS4YPR173C SPT2P06843 333 aaPredicted RBP6.67□□□□□ -1.34
VPS4YPR173C CBP3P21560 335 aa6.67□□□□□ -1.34
VPS4YPR173C IMP2'P32351 346 aa6.67□□□□□ -1.34
VPS4YPR173C YEL043WP32618 956 aa6.67□□□□□ -1.34
VPS4YPR173C SLA1P32790 1244 aa6.67□□□□□ -1.34
VPS4YPR173C SAP190P36123 1033 aa6.67□□□□□ -1.34
VPS4YPR173C PXL1P36166 706 aa6.67□□□□□ -1.34
VPS4YPR173C YFL034WP43564 1073 aa6.67□□□□□ -1.34
VPS4YPR173C YMR102CQ03177 834 aa6.67□□□□□ -1.34
VPS4YPR173C GYL1Q04322 720 aa6.67□□□□□ -1.34
VPS4YPR173C MET32Q12041 191 aa6.67□□□□□ -1.34
VPS4YPR173C SSF2Q12153 453 aaPredicted RBP6.67□□□□□ -1.34
VPS4YPR173C SEC18P18759 758 aaKnown RBP6.66□□□□□ -1.34
VPS4YPR173C MCM4P30665 933 aaKnown RBP6.66□□□□□ -1.34
VPS4YPR173C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
Retrieved 100 of 5,963 RNA–protein pairs in 87.3 ms