RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	LSB3	P43603	459 aa	Known RBP	4.22	□□□□□ -1.73
DBF20	YPR111W	SIW14	P53965	281 aa		4.22	□□□□□ -1.73
DBF20	YPR111W	MRL1	Q06815	381 aa		4.22	□□□□□ -1.73
DBF20	YPR111W	YOR059C	Q08448	450 aa	Known RBP	4.22	□□□□□ -1.73
DBF20	YPR111W	GCR1	P07261	785 aa		4.22	□□□□□ -1.73
DBF20	YPR111W	SMY2	P32909	740 aa	Known RBP	4.22	□□□□□ -1.73
DBF20	YPR111W	VPS53	P47061	822 aa		4.22	□□□□□ -1.73
DBF20	YPR111W	ELA1	P53861	379 aa	Predicted RBP	4.22	□□□□□ -1.73
DBF20	YPR111W	JIP5	Q06214	492 aa	Predicted RBP	4.22	□□□□□ -1.73
DBF20	YPR111W	HDA2	Q06629	674 aa		4.22	□□□□□ -1.73
DBF20	YPR111W	MCA1	Q08601	432 aa		4.22	□□□□□ -1.73
DBF20	YPR111W	HEM13	P11353	328 aa	Known RBP	4.21	□□□□□ -1.74
DBF20	YPR111W	MSB1	P21339	1137 aa	Known RBP	4.21	□□□□□ -1.74
DBF20	YPR111W	KAE1	P36132	386 aa		4.21	□□□□□ -1.74
DBF20	YPR111W	MSH4	P40965	878 aa	Predicted RBP	4.21	□□□□□ -1.74
DBF20	YPR111W	SPO74	P45819	413 aa		4.21	□□□□□ -1.74
DBF20	YPR111W	CHS2	P14180	963 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	CDC34	P14682	295 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	RET1	P22276	1149 aa	Known RBP	4.2	□□□□□ -1.74
DBF20	YPR111W	NFS1	P25374	497 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	AKR1	P39010	764 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	MMM1	P41800	426 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	KRI1	P42846	591 aa	Known RBP	4.2	□□□□□ -1.74
DBF20	YPR111W	ALT1	P52893	592 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
DBF20	YPR111W	PIN2	Q12057	282 aa		4.2	□□□□□ -1.74
DBF20	YPR111W	RPS4A	P0CX35	261 aa	Known RBP	4.19	□□□□□ -1.74
DBF20	YPR111W	RPS4B	P0CX36	261 aa	Known RBP	4.19	□□□□□ -1.74
DBF20	YPR111W	NAM7	P30771	971 aa	Known RBP	4.19	□□□□□ -1.74
DBF20	YPR111W	GNP1	P48813	663 aa		4.19	□□□□□ -1.74
DBF20	YPR111W	YNR063W	P53749	607 aa		4.19	□□□□□ -1.74
DBF20	YPR111W	HRK1	Q08732	759 aa	Known RBP	4.19	□□□□□ -1.74
DBF20	YPR111W	NSI1	Q12457	570 aa		4.19	□□□□□ -1.74
DBF20	YPR111W	QNS1	P38795	714 aa	Known RBP	4.19	□□□□□ -1.74
DBF20	YPR111W	CIT3	P43635	486 aa		4.19	□□□□□ -1.74
DBF20	YPR111W	MKK2	P32491	506 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	OCA5	P38738	679 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	HXT13	P39924	564 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	HXT17	P53631	564 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	HXT15	P54854	567 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	ROD1	Q02805	837 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	VPS16	Q03308	798 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	RSA3	Q05942	220 aa	Known RBP	4.18	□□□□□ -1.74
DBF20	YPR111W	YLR257W	Q06146	321 aa	Known RBP	4.18	□□□□□ -1.74
DBF20	YPR111W	YLR122C	Q12312	125 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	PTC5	Q12511	572 aa		4.18	□□□□□ -1.74
DBF20	YPR111W	DED1	P06634	604 aa	Known RBP	4.17	□□□□□ -1.74
DBF20	YPR111W	SYP1	P25623	870 aa	Known RBP	4.17	□□□□□ -1.74
DBF20	YPR111W	CWC24	P53769	259 aa		4.17	□□□□□ -1.74
DBF20	YPR111W	SBP1	P10080	294 aa	Known RBP	4.16	□□□□□ -1.74
DBF20	YPR111W	DUT1	P33317	147 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	SNF7	P39929	240 aa	Known RBP	4.16	□□□□□ -1.74
DBF20	YPR111W	CNN1	P43618	361 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	YGR053C	P53234	283 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	RCM1	P53972	490 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	ALD6	P54115	500 aa	Known RBP	4.16	□□□□□ -1.74
DBF20	YPR111W	PUS7	Q08647	676 aa	Known RBP	4.16	□□□□□ -1.74
DBF20	YPR111W	YPL260W	Q08977	551 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	AFG2	P32794	780 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	RER2	P35196	286 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	ALG3	P38179	458 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	RGD1	P38339	666 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	GDE1	Q02979	1223 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	TPP1	Q03796	238 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	MED7	Q08278	222 aa		4.16	□□□□□ -1.74
DBF20	YPR111W	DBP5	P20449	482 aa	Known RBP	4.15	□□□□□ -1.75
DBF20	YPR111W	LYP1	P32487	611 aa		4.15	□□□□□ -1.75
DBF20	YPR111W	WHI3	P34761	661 aa	Known RBP	4.15	□□□□□ -1.75
DBF20	YPR111W	VAC8	P39968	578 aa		4.15	□□□□□ -1.75
DBF20	YPR111W	TYW3	P53177	273 aa		4.15	□□□□□ -1.75
DBF20	YPR111W	RAT1	Q02792	1006 aa	Known RBP	4.15	□□□□□ -1.75
DBF20	YPR111W	SPO20	Q04359	397 aa		4.15	□□□□□ -1.75
DBF20	YPR111W	KIP1	P28742	1111 aa		4.14	□□□□□ -1.75
DBF20	YPR111W	HNT2	P49775	206 aa		4.14	□□□□□ -1.75
DBF20	YPR111W	YGR130C	P53278	816 aa		4.14	□□□□□ -1.75
DBF20	YPR111W	YVC1	Q12324	675 aa		4.14	□□□□□ -1.75
DBF20	YPR111W	RPN3	P40016	523 aa	Known RBP	4.13	□□□□□ -1.75
DBF20	YPR111W	EEB1	Q02891	456 aa		4.13	□□□□□ -1.75
DBF20	YPR111W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
DBF20	YPR111W	CYC7	P00045	113 aa		4.13	□□□□□ -1.75
DBF20	YPR111W	TRP2	P00899	507 aa	Known RBP	4.13	□□□□□ -1.75
DBF20	YPR111W	SRO9	P25567	434 aa	Known RBP	4.13	□□□□□ -1.75
DBF20	YPR111W	MDL2	P33311	773 aa		4.13	□□□□□ -1.75
DBF20	YPR111W	FAA4	P47912	694 aa	Known RBP	4.13	□□□□□ -1.75
DBF20	YPR111W	HOS3	Q02959	697 aa	Known RBP	4.13	□□□□□ -1.75
DBF20	YPR111W	EAR1	Q03212	550 aa		4.13	□□□□□ -1.75
DBF20	YPR111W	TIF35	Q04067	274 aa	Known RBP	4.13	□□□□□ -1.75
DBF20	YPR111W	TRE1	Q08919	783 aa		4.13	□□□□□ -1.75
DBF20	YPR111W	RKM4	Q12504	494 aa		4.13	□□□□□ -1.75
DBF20	YPR111W	COQ4	O13525	335 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	YSC84	P32793	468 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	YHL012W	P38709	493 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	MPH1	P40562	993 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	OYE3	P41816	400 aa	Predicted RBP	4.12	□□□□□ -1.75
DBF20	YPR111W	YJL045W	P47052	634 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	TNA1	P53322	534 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	SPO21	Q12411	609 aa		4.12	□□□□□ -1.75
DBF20	YPR111W	TRP3	P00937	484 aa		4.11	□□□□□ -1.75
DBF20	YPR111W	MLS1	P30952	554 aa		4.11	□□□□□ -1.75
DBF20	YPR111W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms