RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	ASE1	P50275	885 aa		10.67	□□□□□ -0.7
DBP1	YPL119C	CLF1	Q12309	687 aa	Predicted RBP	10.67	□□□□□ -0.7
DBP1	YPL119C	SDA1	P53313	767 aa	Known RBP	10.66	□□□□□ -0.7
DBP1	YPL119C	SLK19	Q08581	821 aa	Known RBP	10.66	□□□□□ -0.7
DBP1	YPL119C	CDC37	P06101	506 aa	Known RBP	10.66	□□□□□ -0.7
DBP1	YPL119C	PDC1	P06169	563 aa	Known RBP	10.66	□□□□□ -0.7
DBP1	YPL119C	SAS3	P34218	831 aa		10.66	□□□□□ -0.7
DBP1	YPL119C	YBL028C	P38202	106 aa		10.66	□□□□□ -0.7
DBP1	YPL119C	TPM2	P40414	161 aa		10.66	□□□□□ -0.7
DBP1	YPL119C	YGR237C	P50089	785 aa		10.66	□□□□□ -0.7
DBP1	YPL119C	VPS75	P53853	264 aa		10.66	□□□□□ -0.7
DBP1	YPL119C	SAM2	P19358	384 aa	Known RBP	10.65	□□□□□ -0.7
DBP1	YPL119C	ADP1	P25371	1049 aa		10.65	□□□□□ -0.7
DBP1	YPL119C	SAP190	P36123	1033 aa		10.65	□□□□□ -0.7
DBP1	YPL119C	SPT8	P38915	602 aa		10.65	□□□□□ -0.7
DBP1	YPL119C	SHC1	P39000	512 aa		10.65	□□□□□ -0.7
DBP1	YPL119C	CCT3	P39077	534 aa	Known RBP	10.65	□□□□□ -0.7
DBP1	YPL119C	YJL171C	P46992	396 aa		10.65	□□□□□ -0.7
DBP1	YPL119C	SKG3	Q06315	1026 aa		10.65	□□□□□ -0.7
DBP1	YPL119C	SPB4	P25808	606 aa	Predicted RBP	10.64	□□□□□ -0.71
DBP1	YPL119C	HIR1	P32479	840 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	STV1	P37296	890 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	VPS45	P38932	577 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	DAK2	P43550	591 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	UBA2	P52488	636 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	VPS4	P52917	437 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	MTC3	P53077	123 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	LSC2	P53312	427 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	RET3	P53600	189 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	DSE4	P53753	1117 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	BNI5	P53890	448 aa	Known RBP	10.64	□□□□□ -0.71
DBP1	YPL119C	TRM44	Q02648	567 aa	Known RBP	10.64	□□□□□ -0.71
DBP1	YPL119C	CRF1	Q04930	467 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	NOP58	Q12499	511 aa	Known RBP	10.64	□□□□□ -0.71
DBP1	YPL119C	MSM1	P22438	575 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	RTT107	P38850	1070 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	UBP9	P39967	754 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	CSM3	Q04659	317 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	SUE1	Q06524	206 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	TLG2	Q08144	397 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	APL4	Q12028	832 aa		10.64	□□□□□ -0.71
DBP1	YPL119C	SEC65	P29478	273 aa		10.63	□□□□□ -0.71
DBP1	YPL119C	PSO2	P30620	661 aa		10.63	□□□□□ -0.71
DBP1	YPL119C	YET1	P35723	206 aa		10.63	□□□□□ -0.71
DBP1	YPL119C	CIT3	P43635	486 aa		10.63	□□□□□ -0.71
DBP1	YPL119C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.63	□□□□□ -0.71	not detected
DBP1	YPL119C	HOS3	Q02959	697 aa	Known RBP	10.63	□□□□□ -0.71
DBP1	YPL119C	LAP2	Q10740	671 aa		10.63	□□□□□ -0.71
DBP1	YPL119C	PMA1	P05030	918 aa	Known RBP	10.62	□□□□□ -0.71
DBP1	YPL119C	RRP43	P25359	394 aa	Predicted RBP	10.62	□□□□□ -0.71
DBP1	YPL119C	SPT21	P35209	758 aa		10.62	□□□□□ -0.71
DBP1	YPL119C	PCH2	P38126	564 aa		10.62	□□□□□ -0.71
DBP1	YPL119C	CST26	P38226	397 aa		10.62	□□□□□ -0.71
DBP1	YPL119C	ORC6	P38826	435 aa		10.62	□□□□□ -0.71
DBP1	YPL119C	STR2	P47164	639 aa		10.62	□□□□□ -0.71
DBP1	YPL119C	YGR153W	P48238	217 aa		10.62	□□□□□ -0.71
DBP1	YPL119C	SPP382	Q06411	708 aa	Predicted RBP	10.62	□□□□□ -0.71
DBP1	YPL119C	KIN1	P13185	1064 aa		10.61	□□□□□ -0.71
DBP1	YPL119C	RPL8A	P17076	256 aa	Known RBP	10.61	□□□□□ -0.71
DBP1	YPL119C	GAP1	P19145	602 aa	Predicted RBP	10.61	□□□□□ -0.71
DBP1	YPL119C	MRC1	P25588	1096 aa		10.61	□□□□□ -0.71
DBP1	YPL119C	PET10	P36139	283 aa		10.61	□□□□□ -0.71
DBP1	YPL119C	ATG32	P40458	529 aa		10.61	□□□□□ -0.71
DBP1	YPL119C	VIP1	Q06685	1146 aa	Known RBP	10.61	□□□□□ -0.71
DBP1	YPL119C	UTP7	P40055	554 aa	Known RBP	10.61	□□□□□ -0.71
DBP1	YPL119C	TCB2	P48231	1178 aa		10.61	□□□□□ -0.71
DBP1	YPL119C	EBS1	Q03466	884 aa	Known RBP	10.61	□□□□□ -0.71
DBP1	YPL119C	ADY4	Q05955	493 aa		10.61	□□□□□ -0.71
DBP1	YPL119C	PHO13	P19881	312 aa		10.6	□□□□□ -0.71
DBP1	YPL119C	ERG7	P38604	731 aa		10.6	□□□□□ -0.71
DBP1	YPL119C	YGR273C	P53329	174 aa		10.6	□□□□□ -0.71
DBP1	YPL119C	AIM33	Q04516	312 aa		10.6	□□□□□ -0.71
DBP1	YPL119C	YCG1	Q06680	1035 aa		10.6	□□□□□ -0.71
DBP1	YPL119C	TUB2	P02557	457 aa	Known RBP	10.59	□□□□□ -0.71
DBP1	YPL119C	RPS6A	P0CX37	236 aa	Known RBP	10.59	□□□□□ -0.71
DBP1	YPL119C	RPS6B	P0CX38	236 aa	Predicted RBP	10.59	□□□□□ -0.71
DBP1	YPL119C	SPC110	P32380	944 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	LEO1	P38439	464 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	VTC2	P43585	828 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	FYV8	P46949	817 aa	Known RBP	10.59	□□□□□ -0.71
DBP1	YPL119C	UTP4	Q06679	776 aa	Known RBP	10.59	□□□□□ -0.71
DBP1	YPL119C	YOL075C	Q08234	1294 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	OXR1	Q08952	273 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	YPL216W	Q08964	1102 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	TUS1	Q06412	1307 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	BCD1	P38772	366 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	CTM1	P38818	585 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	PES4	P39684	611 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	LSB1	P53281	241 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	ATG20	Q07528	640 aa		10.59	□□□□□ -0.71
DBP1	YPL119C	HPR1	P17629	752 aa	Known RBP	10.58	□□□□□ -0.72
DBP1	YPL119C	GSY1	P23337	708 aa		10.58	□□□□□ -0.72
DBP1	YPL119C	SHM1	P37292	490 aa	Predicted RBP	10.58	□□□□□ -0.72
DBP1	YPL119C	SNU71	P53207	620 aa	Known RBP	10.58	□□□□□ -0.72
DBP1	YPL119C	YLH47	Q06493	454 aa		10.58	□□□□□ -0.72
DBP1	YPL119C	PET123	P17558	318 aa		10.57	□□□□□ -0.72
DBP1	YPL119C	RAD53	P22216	821 aa		10.57	□□□□□ -0.72
DBP1	YPL119C	PWP2	P25635	923 aa	Known RBP	10.57	□□□□□ -0.72
DBP1	YPL119C	THI6	P41835	540 aa		10.57	□□□□□ -0.72
DBP1	YPL119C	AIP1	P46680	615 aa	Known RBP	10.57	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 43 ms