RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	ARP5	P53946	755 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	SRC1	Q03707	834 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	UBX2	Q04228	584 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	BDF2	Q07442	638 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CHL1	YPL008W	YPL150W	Q12152	901 aa		4.59	□□□□□ -1.67
CHL1	YPL008W	BUD31	P25337	157 aa	Predicted RBP	4.59	□□□□□ -1.68
CHL1	YPL008W	KNS1	P32350	737 aa	Predicted RBP	4.59	□□□□□ -1.68
CHL1	YPL008W	CRG1	P38892	291 aa	RIP-Chip data	4.59	□□□□□ -1.68	not detected
CHL1	YPL008W	KRE33	P53914	1056 aa	Known RBP	4.59	□□□□□ -1.68
CHL1	YPL008W	TSC13	Q99190	310 aa		4.59	□□□□□ -1.68
CHL1	YPL008W	RAM1	P22007	431 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	RPT1	P33299	467 aa	Known RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CHL1	YPL008W	GTT3	P39996	337 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	RPN11	P43588	306 aa	Known RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	ISM1	P48526	1002 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	RSC1	P53236	928 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	FCP1	Q03254	732 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	SYF1	Q04048	859 aa	Predicted RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	SPN1	Q06505	410 aa	Predicted RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	PUN1	Q06991	263 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	DPH6	Q12429	685 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	RPL22A	P05749	121 aa	Known RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	PGI1	P12709	554 aa	Known RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	NUD1	P32336	851 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	PTC4	P38089	393 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	RKM3	P38222	552 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	YHR020W	P38708	688 aa	Known RBP	4.58	□□□□□ -1.68
CHL1	YPL008W	UBP16	Q02863	499 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	DPL1	Q05567	589 aa		4.58	□□□□□ -1.68
CHL1	YPL008W	FBP26	P32604	452 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	MIC60	P36112	540 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	RFT1	P38206	574 aa	Predicted RBP	4.57	□□□□□ -1.68
CHL1	YPL008W	PAC1	P39946	494 aa	Known RBP	4.57	□□□□□ -1.68
CHL1	YPL008W	HXT10	P43581	546 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	IRC8	P47046	822 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	YNL193W	P53870	558 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	TRS120	Q04183	1289 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	RPN7	Q06103	429 aa	Known RBP	4.57	□□□□□ -1.68
CHL1	YPL008W	ESF1	Q06344	628 aa	Known RBP	4.57	□□□□□ -1.68
CHL1	YPL008W	DUR1,2	P32528	1835 aa	Known RBP	4.57	□□□□□ -1.68
CHL1	YPL008W	HAP4	P14064	554 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	DUT1	P33317	147 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	IXR1	P33417	597 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	CTF18	P49956	741 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	ESC2	Q06340	456 aa		4.57	□□□□□ -1.68
CHL1	YPL008W	DDP1	Q99321	188 aa	Known RBP	4.57	□□□□□ -1.68
CHL1	YPL008W	CBP3	P21560	335 aa		4.56	□□□□□ -1.68
CHL1	YPL008W	MPE1	P35728	441 aa	Known RBP	4.56	□□□□□ -1.68
CHL1	YPL008W	YBR197C	P38306	217 aa		4.56	□□□□□ -1.68
CHL1	YPL008W	CIC1	P38779	376 aa	Known RBP	4.56	□□□□□ -1.68
CHL1	YPL008W	RRP8	P38961	392 aa	Known RBP	4.56	□□□□□ -1.68
CHL1	YPL008W	UTP13	Q05946	817 aa	Known RBP	4.56	□□□□□ -1.68
CHL1	YPL008W	YPR097W	Q06839	1073 aa		4.56	□□□□□ -1.68
CHL1	YPL008W	FUR4	P05316	633 aa	Known RBP	4.56	□□□□□ -1.68
CHL1	YPL008W	NPR2	P39923	615 aa		4.56	□□□□□ -1.68
CHL1	YPL008W	TFG2	P41896	400 aa	Predicted RBP	4.56	□□□□□ -1.68
CHL1	YPL008W	YLR407W	Q06070	228 aa		4.56	□□□□□ -1.68
CHL1	YPL008W	CPA2	P03965	1118 aa	Known RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	PDC1	P06169	563 aa	Known RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	CYC8	P14922	966 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	TSR4	P25040	408 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	NGR1	P32831	672 aa	Known RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	TOM20	P35180	183 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	YKT6	P36015	200 aa	Known RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	YKL069W	P36088	180 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	PMC1	P38929	1173 aa	Predicted RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	PES4	P39684	611 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	ALG2	P43636	503 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	YJR142W	P47173	342 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	CWH41	P53008	833 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	PIB2	P53191	635 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	EST2	Q06163	884 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	TEC1	P18412	486 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	SPC110	P32380	944 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	MRPL10	P36520	322 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	LAM4	P38800	1345 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	FAA3	P39002	694 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	RPS26A	P39938	119 aa	Known RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	RPS26B	P39939	119 aa	Known RBP	4.55	□□□□□ -1.68
CHL1	YPL008W	ICP55	P40051	511 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	YGL081W	P53156	320 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	RTS3	P53289	263 aa		4.55	□□□□□ -1.68
CHL1	YPL008W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
CHL1	YPL008W	MGM1	P32266	881 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	SLA1	P32790	1244 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	BMH2	P34730	273 aa	Known RBP	4.54	□□□□□ -1.68
CHL1	YPL008W	MAL33	P38157	468 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	TIF4632	P39936	914 aa	Known RBP	4.54	□□□□□ -1.68
CHL1	YPL008W	IRC3	Q06683	689 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	THI3	Q07471	609 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	IMP2'	P32351	346 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	NPR3	P38742	1146 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	TCB2	P48231	1178 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	YPT11	P48559	417 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	RPA14	P50106	137 aa		4.54	□□□□□ -1.68
CHL1	YPL008W	STE20	Q03497	939 aa	Known RBP	4.54	□□□□□ -1.68
CHL1	YPL008W	CLF1	Q12309	687 aa	Predicted RBP	4.54	□□□□□ -1.68
CHL1	YPL008W	YPR015C	Q12531	247 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms