RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	CDC34	P14682	295 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	SKN7	P38889	622 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	ARI1	P53111	347 aa	Known RBP	5.8	□□□□□ -1.48
YTM1	YOR272W	VPS16	Q03308	798 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	RKM2	Q03942	479 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	DOT1	Q04089	582 aa	Known RBP	5.8	□□□□□ -1.48
YTM1	YOR272W	EST2	Q06163	884 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	LAP2	Q10740	671 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	YCK2	P23292	546 aa	Known RBP	5.8	□□□□□ -1.48
YTM1	YOR272W	SLN1	P39928	1220 aa	Predicted RBP	5.8	□□□□□ -1.48
YTM1	YOR272W	SIW14	P53965	281 aa		5.8	□□□□□ -1.48
YTM1	YOR272W	ALG6	Q12001	544 aa	Known RBP	5.8	□□□□□ -1.48
YTM1	YOR272W	HSE1	P38753	452 aa		5.79	□□□□□ -1.48
YTM1	YOR272W	YAR028W	P39548	234 aa		5.79	□□□□□ -1.48
YTM1	YOR272W	GNP1	P48813	663 aa		5.79	□□□□□ -1.48
YTM1	YOR272W	YGR045C	P53229	120 aa		5.79	□□□□□ -1.48
YTM1	YOR272W	REC8	Q12188	680 aa		5.79	□□□□□ -1.48
YTM1	YOR272W	XRN1	P22147	1528 aa	Known RBP	5.78	□□□□□ -1.48
YTM1	YOR272W	CWC24	P53769	259 aa		5.78	□□□□□ -1.48
YTM1	YOR272W	SPO74	P45819	413 aa		5.77	□□□□□ -1.49
YTM1	YOR272W	ELA1	P53861	379 aa	Predicted RBP	5.77	□□□□□ -1.49
YTM1	YOR272W	MAG2	Q06436	670 aa	Known RBP	5.77	□□□□□ -1.49
YTM1	YOR272W	DUT1	P33317	147 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	NNK1	P36003	928 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	GPT2	P36148	743 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	HXT13	P39924	564 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	HXT17	P53631	564 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	YNR063W	P53749	607 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	HXT15	P54854	567 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	GIC2	Q06648	383 aa		5.76	□□□□□ -1.49
YTM1	YOR272W	PEP1	P32319	1579 aa		5.75	□□□□□ -1.49
YTM1	YOR272W	DED1	P06634	604 aa	Known RBP	5.75	□□□□□ -1.49
YTM1	YOR272W	VAC8	P39968	578 aa		5.75	□□□□□ -1.49
YTM1	YOR272W	VPS53	P47061	822 aa		5.75	□□□□□ -1.49
YTM1	YOR272W	YGR053C	P53234	283 aa		5.75	□□□□□ -1.49
YTM1	YOR272W	ROD1	Q02805	837 aa		5.75	□□□□□ -1.49
YTM1	YOR272W	GDE1	Q02979	1223 aa		5.75	□□□□□ -1.49
YTM1	YOR272W	ATG2	P53855	1592 aa		5.74	□□□□□ -1.49
YTM1	YOR272W	MKK2	P32491	506 aa		5.74	□□□□□ -1.49
YTM1	YOR272W	SMY2	P32909	740 aa	Known RBP	5.74	□□□□□ -1.49
YTM1	YOR272W	MSH4	P40965	878 aa	Predicted RBP	5.74	□□□□□ -1.49
YTM1	YOR272W	KRI1	P42846	591 aa	Known RBP	5.74	□□□□□ -1.49
YTM1	YOR272W	ALD6	P54115	500 aa	Known RBP	5.74	□□□□□ -1.49
YTM1	YOR272W	YPL034W	Q03083	165 aa		5.74	□□□□□ -1.49
YTM1	YOR272W	NFS1	P25374	497 aa		5.73	□□□□□ -1.49
YTM1	YOR272W	RER2	P35196	286 aa		5.73	□□□□□ -1.49
YTM1	YOR272W	REV3	P14284	1504 aa		5.72	□□□□□ -1.49
YTM1	YOR272W	RET1	P22276	1149 aa	Known RBP	5.72	□□□□□ -1.49
YTM1	YOR272W	SYP1	P25623	870 aa	Known RBP	5.72	□□□□□ -1.49
YTM1	YOR272W	COQ2	P32378	372 aa		5.72	□□□□□ -1.49
YTM1	YOR272W	SAF1	P38352	637 aa		5.72	□□□□□ -1.49
YTM1	YOR272W	QNS1	P38795	714 aa	Known RBP	5.72	□□□□□ -1.49
YTM1	YOR272W	FAA4	P47912	694 aa	Known RBP	5.72	□□□□□ -1.49
YTM1	YOR272W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
YTM1	YOR272W	MCA1	Q08601	432 aa		5.72	□□□□□ -1.49
YTM1	YOR272W	PTC5	Q12511	572 aa		5.72	□□□□□ -1.49
YTM1	YOR272W	RPS4A	P0CX35	261 aa	Known RBP	5.71	□□□□□ -1.5
YTM1	YOR272W	RPS4B	P0CX36	261 aa	Known RBP	5.71	□□□□□ -1.5
YTM1	YOR272W	NAM7	P30771	971 aa	Known RBP	5.71	□□□□□ -1.5
YTM1	YOR272W	LYP1	P32487	611 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	AFG2	P32794	780 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	PGM1	P33401	570 aa	Known RBP	5.71	□□□□□ -1.5
YTM1	YOR272W	AKR1	P39010	764 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	CNN1	P43618	361 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	TYW3	P53177	273 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	EEB1	Q02891	456 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	RSA3	Q05942	220 aa	Known RBP	5.71	□□□□□ -1.5
YTM1	YOR272W	SIN3	P22579	1536 aa		5.71	□□□□□ -1.5
YTM1	YOR272W	ALG3	P38179	458 aa		5.7	□□□□□ -1.5
YTM1	YOR272W	MMM1	P41800	426 aa		5.7	□□□□□ -1.5
YTM1	YOR272W	ALT1	P52893	592 aa		5.7	□□□□□ -1.5
YTM1	YOR272W	RAT1	Q02792	1006 aa	Known RBP	5.7	□□□□□ -1.5
YTM1	YOR272W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
YTM1	YOR272W	SPO20	Q04359	397 aa		5.7	□□□□□ -1.5
YTM1	YOR272W	YLR257W	Q06146	321 aa	Known RBP	5.7	□□□□□ -1.5
YTM1	YOR272W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
YTM1	YOR272W	YOR059C	Q08448	450 aa	Known RBP	5.7	□□□□□ -1.5
YTM1	YOR272W	HRK1	Q08732	759 aa	Known RBP	5.7	□□□□□ -1.5
YTM1	YOR272W	WRS1	Q12109	432 aa	Known RBP	5.7	□□□□□ -1.5
YTM1	YOR272W	SSN2	P38931	1420 aa		5.7	□□□□□ -1.5
YTM1	YOR272W	TRP2	P00899	507 aa	Known RBP	5.69	□□□□□ -1.5
YTM1	YOR272W	CHS2	P14180	963 aa		5.69	□□□□□ -1.5
YTM1	YOR272W	DBP5	P20449	482 aa	Known RBP	5.69	□□□□□ -1.5
YTM1	YOR272W	RGD1	P38339	666 aa		5.69	□□□□□ -1.5
YTM1	YOR272W	KAE1	P36132	386 aa		5.68	□□□□□ -1.5
YTM1	YOR272W	TIF35	Q04067	274 aa	Known RBP	5.68	□□□□□ -1.5
YTM1	YOR272W	YPL260W	Q08977	551 aa		5.68	□□□□□ -1.5
YTM1	YOR272W	SSK2	P53599	1579 aa		5.68	□□□□□ -1.5
YTM1	YOR272W	MSB1	P21339	1137 aa	Known RBP	5.67	□□□□□ -1.5
YTM1	YOR272W	SNF7	P39929	240 aa	Known RBP	5.67	□□□□□ -1.5
YTM1	YOR272W	CIT3	P43635	486 aa		5.67	□□□□□ -1.5
YTM1	YOR272W	NNF1	P47149	201 aa		5.67	□□□□□ -1.5
YTM1	YOR272W	HNT2	P49775	206 aa		5.67	□□□□□ -1.5
YTM1	YOR272W	TPP1	Q03796	238 aa		5.67	□□□□□ -1.5
YTM1	YOR272W	OPI10	Q08202	246 aa		5.67	□□□□□ -1.5
YTM1	YOR272W	PUS7	Q08647	676 aa	Known RBP	5.67	□□□□□ -1.5
YTM1	YOR272W	FAL1	Q12099	399 aa	Known RBP	5.67	□□□□□ -1.5
YTM1	YOR272W	YLR122C	Q12312	125 aa		5.67	□□□□□ -1.5
YTM1	YOR272W	SBP1	P10080	294 aa	Known RBP	5.66	□□□□□ -1.5
YTM1	YOR272W	BAS1	P22035	811 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms