RNA–Protein interactions for RNA: YOR046C

DBP5, Transcript of Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family, yeast

Gene DBP5, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP5	YOR046C	TY1A-JR1	P0CX74	440 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	TY1A-LR3	P0CX75	440 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	TY1A-ML2	P0CX76	440 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	SEC23	P15303	768 aa	Known RBP	6.09	□□□□□ -1.43
DBP5	YOR046C	CLN2	P20438	545 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	WHI3	P34761	661 aa	Known RBP	6.09	□□□□□ -1.43
DBP5	YOR046C	SDH1	Q00711	640 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	VPS16	Q03308	798 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	TY1A-GR1	Q12085	440 aa		6.09	□□□□□ -1.43
DBP5	YOR046C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.09	□□□□□ -1.43
DBP5	YOR046C	TY1A-OL	Q92392	440 aa	Known RBP	6.09	□□□□□ -1.43
DBP5	YOR046C	GCR1	P07261	785 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	HEM13	P11353	328 aa	Known RBP	6.08	□□□□□ -1.44
DBP5	YOR046C	TAF13	P11747	167 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	ELM1	P32801	640 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	RDH54	P38086	958 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	XKS1	P42826	600 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	YOR059C	Q08448	450 aa	Known RBP	6.08	□□□□□ -1.44
DBP5	YOR046C	NSI1	Q12457	570 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	VMA4	P22203	233 aa	Known RBP	6.08	□□□□□ -1.44
DBP5	YOR046C	ARL1	P38116	183 aa	Known RBP	6.08	□□□□□ -1.44
DBP5	YOR046C	REI1	P38344	393 aa	Predicted RBP	6.08	□□□□□ -1.44
DBP5	YOR046C	SLS1	P42900	643 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	RCM1	P53972	490 aa		6.08	□□□□□ -1.44
DBP5	YOR046C	NEM1	P38757	446 aa		6.07	□□□□□ -1.44
DBP5	YOR046C	MTR4	P47047	1073 aa	Known RBP	6.07	□□□□□ -1.44
DBP5	YOR046C	RTT10	Q08924	1013 aa		6.07	□□□□□ -1.44
DBP5	YOR046C	RPS4A	P0CX35	261 aa	Known RBP	6.06	□□□□□ -1.44
DBP5	YOR046C	RPS4B	P0CX36	261 aa	Known RBP	6.06	□□□□□ -1.44
DBP5	YOR046C	CDC34	P14682	295 aa		6.06	□□□□□ -1.44
DBP5	YOR046C	GNP1	P48813	663 aa		6.06	□□□□□ -1.44
DBP5	YOR046C	MRL1	Q06815	381 aa		6.06	□□□□□ -1.44
DBP5	YOR046C	ALG6	Q12001	544 aa	Known RBP	6.06	□□□□□ -1.44
DBP5	YOR046C	DUT1	P33317	147 aa		6.05	□□□□□ -1.44
DBP5	YOR046C	MSH4	P40965	878 aa	Predicted RBP	6.05	□□□□□ -1.44
DBP5	YOR046C	UTP5	Q04177	643 aa	Known RBP	6.05	□□□□□ -1.44
DBP5	YOR046C	HDA2	Q06629	674 aa		6.05	□□□□□ -1.44
DBP5	YOR046C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.04	□□□□□ -1.44	RIP-Chip
DBP5	YOR046C	LRG1	P35688	1017 aa		6.04	□□□□□ -1.44
DBP5	YOR046C	ALT1	P52893	592 aa		6.04	□□□□□ -1.44
DBP5	YOR046C	CWC24	P53769	259 aa		6.04	□□□□□ -1.44
DBP5	YOR046C	ALD6	P54115	500 aa	Known RBP	6.04	□□□□□ -1.44
DBP5	YOR046C	TMA46	Q12000	345 aa	Known RBP	6.04	□□□□□ -1.44
DBP5	YOR046C	RAD27	P26793	382 aa		6.03	□□□□□ -1.44
DBP5	YOR046C	VAC8	P39968	578 aa		6.03	□□□□□ -1.44
DBP5	YOR046C	OYE3	P41816	400 aa	Predicted RBP	6.03	□□□□□ -1.44
DBP5	YOR046C	SIW14	P53965	281 aa		6.03	□□□□□ -1.44
DBP5	YOR046C	EST2	Q06163	884 aa		6.03	□□□□□ -1.44
DBP5	YOR046C	ADD66	P36040	267 aa		6.02	□□□□□ -1.45
DBP5	YOR046C	POL12	P38121	705 aa	Predicted RBP	6.02	□□□□□ -1.45
DBP5	YOR046C	ENT3	P47160	408 aa		6.02	□□□□□ -1.45
DBP5	YOR046C	ECL1	P48235	211 aa		6.02	□□□□□ -1.45
DBP5	YOR046C	YGR045C	P53229	120 aa		6.02	□□□□□ -1.45
DBP5	YOR046C	SEG2	P34250	1132 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	HXT13	P39924	564 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	YGR053C	P53234	283 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	HXT17	P53631	564 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	HXT15	P54854	567 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	GDE1	Q02979	1223 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	DFG16	Q99234	619 aa		6.01	□□□□□ -1.45
DBP5	YOR046C	FAA4	P47912	694 aa	Known RBP	6	□□□□□ -1.45
DBP5	YOR046C	ELA1	P53861	379 aa	Predicted RBP	6	□□□□□ -1.45
DBP5	YOR046C	ROD1	Q02805	837 aa		6	□□□□□ -1.45
DBP5	YOR046C	EAR1	Q03212	550 aa		6	□□□□□ -1.45
DBP5	YOR046C	RNQ1	P25367	405 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	NFS1	P25374	497 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	SMY2	P32909	740 aa	Known RBP	5.99	□□□□□ -1.45
DBP5	YOR046C	ATG14	P38270	344 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	RKM2	Q03942	479 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	AVO1	Q08236	1176 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	DED1	P06634	604 aa	Known RBP	5.99	□□□□□ -1.45
DBP5	YOR046C	HSP78	P33416	811 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	RER2	P35196	286 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	NNK1	P36003	928 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	YAR028W	P39548	234 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	UBP5	P39944	805 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	EEB1	Q02891	456 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	YVC1	Q12324	675 aa		5.99	□□□□□ -1.45
DBP5	YOR046C	ADP1	P25371	1049 aa		5.98	□□□□□ -1.45
DBP5	YOR046C	MKK2	P32491	506 aa		5.98	□□□□□ -1.45
DBP5	YOR046C	NIT1	P40447	199 aa		5.98	□□□□□ -1.45
DBP5	YOR046C	TRE1	Q08919	783 aa		5.98	□□□□□ -1.45
DBP5	YOR046C	LAP2	Q10740	671 aa		5.98	□□□□□ -1.45
DBP5	YOR046C	NNF1	P47149	201 aa		5.97	□□□□□ -1.45
DBP5	YOR046C	YNR063W	P53749	607 aa		5.97	□□□□□ -1.45
DBP5	YOR046C	ORC3	P54790	616 aa		5.97	□□□□□ -1.45
DBP5	YOR046C	AFG2	P32794	780 aa		5.96	□□□□□ -1.46
DBP5	YOR046C	PEX7	P39108	375 aa		5.96	□□□□□ -1.46
DBP5	YOR046C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
DBP5	YOR046C	SSY1	Q03770	852 aa		5.96	□□□□□ -1.46
DBP5	YOR046C	WRS1	Q12109	432 aa	Known RBP	5.96	□□□□□ -1.46
DBP5	YOR046C	SYP1	P25623	870 aa	Known RBP	5.95	□□□□□ -1.46
DBP5	YOR046C	LYP1	P32487	611 aa		5.95	□□□□□ -1.46
DBP5	YOR046C	HSE1	P38753	452 aa		5.95	□□□□□ -1.46
DBP5	YOR046C	TYW3	P53177	273 aa		5.95	□□□□□ -1.46
DBP5	YOR046C	RAT1	Q02792	1006 aa	Known RBP	5.95	□□□□□ -1.46
DBP5	YOR046C	OPI10	Q08202	246 aa		5.95	□□□□□ -1.46
DBP5	YOR046C	TRP2	P00899	507 aa	Known RBP	5.94	□□□□□ -1.46
DBP5	YOR046C	SSF2	Q12153	453 aa	Predicted RBP	5.94	□□□□□ -1.46
DBP5	YOR046C	OCA5	P38738	679 aa		5.93	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms