RNA–Protein interactions for RNA: YNL339C

YRF1-6, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-6, Length 5,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-6YNL339C HRQ1Q05549 1077 aa8.65□□□□□ -1.03
YRF1-6YNL339C GPA1P08539 472 aa8.64□□□□□ -1.03
YRF1-6YNL339C SMC5Q08204 1093 aa8.64□□□□□ -1.03
YRF1-6YNL339C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
YRF1-6YNL339C RAD1P06777 1100 aa8.64□□□□□ -1.03
YRF1-6YNL339C FBP26P32604 452 aa8.64□□□□□ -1.03
YRF1-6YNL339C CST26P38226 397 aa8.64□□□□□ -1.03
YRF1-6YNL339C VPS30Q02948 557 aa8.64□□□□□ -1.03
YRF1-6YNL339C ANP1P32629 500 aa8.64□□□□□ -1.03
YRF1-6YNL339C SAP1P39955 897 aaKnown RBP8.64□□□□□ -1.03
YRF1-6YNL339C MAD1P40957 749 aa8.64□□□□□ -1.03
YRF1-6YNL339C UBA2P52488 636 aa8.64□□□□□ -1.03
YRF1-6YNL339C UTP13Q05946 817 aaKnown RBP8.64□□□□□ -1.03
YRF1-6YNL339C YGR130CP53278 816 aa8.64□□□□□ -1.03
YRF1-6YNL339C OXR1Q08952 273 aa8.64□□□□□ -1.03
YRF1-6YNL339C RGD1P38339 666 aa8.63□□□□□ -1.03
YRF1-6YNL339C FOL1P53848 824 aa8.63□□□□□ -1.03
YRF1-6YNL339C VIP1Q06685 1146 aaKnown RBP8.63□□□□□ -1.03
YRF1-6YNL339C NOC3Q07896 663 aaPredicted RBP8.63□□□□□ -1.03
YRF1-6YNL339C AFT2Q08957 416 aa8.63□□□□□ -1.03
YRF1-6YNL339C TRL1P09880 827 aaKnown RBP8.63□□□□□ -1.03
YRF1-6YNL339C FUN30P31380 1131 aa8.63□□□□□ -1.03
YRF1-6YNL339C ASE1P50275 885 aa8.63□□□□□ -1.03
YRF1-6YNL339C ERG12P07277 443 aa8.63□□□□□ -1.03
YRF1-6YNL339C TBF1Q02457 562 aa8.63□□□□□ -1.03
YRF1-6YNL339C SLK19Q08581 821 aaKnown RBP8.63□□□□□ -1.03
YRF1-6YNL339C YKL222CP35995 705 aa8.62□□□□□ -1.03
YRF1-6YNL339C RKM3P38222 552 aa8.62□□□□□ -1.03
YRF1-6YNL339C NMD3P38861 518 aaKnown RBP8.62□□□□□ -1.03
YRF1-6YNL339C PSO2P30620 661 aa8.62□□□□□ -1.03
YRF1-6YNL339C PRP42Q03776 544 aaKnown RBP8.62□□□□□ -1.03
YRF1-6YNL339C RUP1Q12242 671 aa8.62□□□□□ -1.03
YRF1-6YNL339C POL3P15436 1097 aa8.62□□□□□ -1.03
YRF1-6YNL339C HAP5Q02516 242 aa8.62□□□□□ -1.03
YRF1-6YNL339C CHS2P14180 963 aa8.62□□□□□ -1.03
YRF1-6YNL339C MAL33P38157 468 aa8.62□□□□□ -1.03
YRF1-6YNL339C TIF5P38431 405 aaKnown RBP8.62□□□□□ -1.03
YRF1-6YNL339C MRPS35P53292 345 aa8.62□□□□□ -1.03
YRF1-6YNL339C ZPR1P53303 486 aaKnown RBP8.62□□□□□ -1.03
YRF1-6YNL339C PEX15Q08215 383 aa8.62□□□□□ -1.03
YRF1-6YNL339C SEY1Q99287 776 aa8.62□□□□□ -1.03
YRF1-6YNL339C YOR093CQ12275 1648 aa8.61□□□□□ -1.03
YRF1-6YNL339C CAF20P12962 161 aaKnown RBP8.61□□□□□ -1.03
YRF1-6YNL339C RED1P14291 827 aa8.61□□□□□ -1.03
YRF1-6YNL339C PTP3P40048 928 aa8.61□□□□□ -1.03
YRF1-6YNL339C RGD2P43556 714 aa8.61□□□□□ -1.03
YRF1-6YNL339C TOS3P43637 560 aa8.61□□□□□ -1.03
YRF1-6YNL339C INP52P50942 1183 aa8.61□□□□□ -1.03
YRF1-6YNL339C PIN4P34217 668 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
YRF1-6YNL339C TOM71P38825 639 aaKnown RBP8.61□□□□□ -1.03
YRF1-6YNL339C ALT2P52892 507 aa8.61□□□□□ -1.03
YRF1-6YNL339C DOT5P40553 215 aa8.61□□□□□ -1.03
YRF1-6YNL339C DOP1Q03921 1698 aa8.61□□□□□ -1.03
YRF1-6YNL339C CDC16P09798 840 aa8.61□□□□□ -1.03
YRF1-6YNL339C APL1P27351 700 aa8.61□□□□□ -1.03
YRF1-6YNL339C EFB1P32471 206 aaKnown RBP8.61□□□□□ -1.03
YRF1-6YNL339C CEP3P40969 608 aa8.61□□□□□ -1.03
YRF1-6YNL339C LAP2Q10740 671 aa8.61□□□□□ -1.03
YRF1-6YNL339C TUS1Q06412 1307 aa8.6□□□□□ -1.03
YRF1-6YNL339C YBL086CP38177 466 aa8.6□□□□□ -1.03
YRF1-6YNL339C MLP1Q02455 1875 aaKnown RBP8.6□□□□□ -1.03
YRF1-6YNL339C ATG23Q06671 453 aa8.6□□□□□ -1.03
YRF1-6YNL339C DAL1P32375 460 aa8.6□□□□□ -1.03
YRF1-6YNL339C VAB2P40003 282 aa8.6□□□□□ -1.03
YRF1-6YNL339C UBP15P50101 1230 aa8.6□□□□□ -1.03
YRF1-6YNL339C PCL10P53124 433 aa8.6□□□□□ -1.03
YRF1-6YNL339C JIP4Q03361 876 aa8.6□□□□□ -1.03
YRF1-6YNL339C SDH5Q08230 162 aa8.6□□□□□ -1.03
YRF1-6YNL339C CTT1P06115 562 aa8.59□□□□□ -1.03
YRF1-6YNL339C MRPL25P23369 157 aa8.59□□□□□ -1.03
YRF1-6YNL339C RPC19P28000 142 aaKnown RBP8.59□□□□□ -1.03
YRF1-6YNL339C AFG2P32794 780 aa8.59□□□□□ -1.03
YRF1-6YNL339C YGR237CP50089 785 aa8.59□□□□□ -1.03
YRF1-6YNL339C CBK1P53894 756 aa8.59□□□□□ -1.03
YRF1-6YNL339C YMR074CQ04773 145 aa8.59□□□□□ -1.03
YRF1-6YNL339C YPL216WQ08964 1102 aa8.59□□□□□ -1.03
YRF1-6YNL339C GET3Q12154 354 aaKnown RBP8.59□□□□□ -1.03
YRF1-6YNL339C MATALPHA2P0CY08 210 aa8.59□□□□□ -1.03
YRF1-6YNL339C HMLALPHA2P0CY09 210 aa8.59□□□□□ -1.03
YRF1-6YNL339C ICL1P28240 557 aaPredicted RBP8.59□□□□□ -1.03
YRF1-6YNL339C TBS1P38114 1094 aa8.59□□□□□ -1.03
YRF1-6YNL339C TY2B-BQ12491 1770 aa8.59□□□□□ -1.03
YRF1-6YNL339C PSP2P50109 593 aaKnown RBP8.59□□□□□ -1.03
YRF1-6YNL339C PRE10P21242 288 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
YRF1-6YNL339C YEL043WP32618 956 aa8.59□□□□□ -1.03
YRF1-6YNL339C ATG1P53104 897 aa8.59□□□□□ -1.03
YRF1-6YNL339C NNF2P53253 936 aa8.59□□□□□ -1.03
YRF1-6YNL339C CLB3P24870 427 aa8.59□□□□□ -1.04
YRF1-6YNL339C DSL1P53847 754 aa8.59□□□□□ -1.04
YRF1-6YNL339C EFM2P38347 419 aa8.58□□□□□ -1.04
YRF1-6YNL339C PGA2P53903 129 aa8.58□□□□□ -1.04
YRF1-6YNL339C SRO9P25567 434 aaKnown RBP8.58□□□□□ -1.04
YRF1-6YNL339C RXT2P38255 430 aa8.58□□□□□ -1.04
YRF1-6YNL339C SPP381P38282 291 aaPredicted RBP8.58□□□□□ -1.04
YRF1-6YNL339C TFC6Q06339 672 aa8.58□□□□□ -1.04
YRF1-6YNL339C VPS4P52917 437 aa8.58□□□□□ -1.04
YRF1-6YNL339C ESF2P53743 316 aaKnown RBP8.58□□□□□ -1.04
YRF1-6YNL339C EFT1P32324 842 aaKnown RBP8.58□□□□□ -1.04
YRF1-6YNL339C RRP1P35178 278 aaPredicted RBP8.58□□□□□ -1.04
YRF1-6YNL339C RRN3P36070 627 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms