RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W EFM2P38347 419 aa3.14□□□□□ -1.91
CAF120YNL278W PPX1P38698 397 aa3.14□□□□□ -1.91
CAF120YNL278W FIG4P42837 879 aa3.14□□□□□ -1.91
CAF120YNL278W DAK2P43550 591 aa3.14□□□□□ -1.91
CAF120YNL278W IES1P43579 692 aa3.14□□□□□ -1.91
CAF120YNL278W YPT11P48559 417 aa3.14□□□□□ -1.91
CAF120YNL278W ATG1P53104 897 aa3.14□□□□□ -1.91
CAF120YNL278W SLT2Q00772 484 aa3.14□□□□□ -1.91
CAF120YNL278W HRQ1Q05549 1077 aa3.14□□□□□ -1.91
CAF120YNL278W PSR1Q07800 427 aa3.14□□□□□ -1.91
CAF120YNL278W GPI13Q07830 1017 aa3.14□□□□□ -1.91
CAF120YNL278W APL5Q08951 932 aaKnown RBP3.14□□□□□ -1.91
CAF120YNL278W NEW1Q08972 1196 aaKnown RBP3.14□□□□□ -1.91
CAF120YNL278W RAD59Q12223 238 aa3.14□□□□□ -1.91
CAF120YNL278W ERP4Q12450 207 aa3.14□□□□□ -1.91
CAF120YNL278W TY4B-PA0A0B7P3V8 1104 aa3.13□□□□□ -1.91
CAF120YNL278W MRP7P12687 371 aa3.13□□□□□ -1.91
CAF120YNL278W YEL043WP32618 956 aa3.13□□□□□ -1.91
CAF120YNL278W PTC4P38089 393 aa3.13□□□□□ -1.91
CAF120YNL278W SLI15P38283 698 aa3.13□□□□□ -1.91
CAF120YNL278W BOL3P39724 118 aa3.13□□□□□ -1.91
CAF120YNL278W SDS3P40505 327 aa3.13□□□□□ -1.91
CAF120YNL278W TEA1P47988 759 aa3.13□□□□□ -1.91
CAF120YNL278W YGL081WP53156 320 aa3.13□□□□□ -1.91
CAF120YNL278W FUS2Q05670 677 aa3.13□□□□□ -1.91
CAF120YNL278W GYP5Q12344 894 aa3.13□□□□□ -1.91
CAF120YNL278W TY4A-HQ6Q5P6 413 aa3.13□□□□□ -1.91
CAF120YNL278W RPS9AO13516 197 aaKnown RBP3.13□□□□□ -1.91
CAF120YNL278W RPC31P17890 251 aa3.13□□□□□ -1.91
CAF120YNL278W RAD51P25454 400 aa3.13□□□□□ -1.91
CAF120YNL278W ECM21P38167 1117 aaKnown RBP3.13□□□□□ -1.91
CAF120YNL278W IES5P40060 125 aa3.13□□□□□ -1.91
CAF120YNL278W SEC27P41811 889 aaKnown RBP3.13□□□□□ -1.91
CAF120YNL278W NIS1P53939 407 aa3.13□□□□□ -1.91
CAF120YNL278W HEL2Q05580 639 aaKnown RBP3.13□□□□□ -1.91
CAF120YNL278W PUS1Q12211 544 aaKnown RBP3.13□□□□□ -1.91
CAF120YNL278W GRX6Q12438 231 aa3.13□□□□□ -1.91
CAF120YNL278W NOP14Q99207 810 aaKnown RBP3.13□□□□□ -1.91
CAF120YNL278W POL3P15436 1097 aa3.12□□□□□ -1.91
CAF120YNL278W PWP2P25635 923 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W PSE1P32337 1089 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W RRP14P36080 434 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W AAP1P37898 856 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W YGR130CP53278 816 aa3.12□□□□□ -1.91
CAF120YNL278W YPL034WQ03083 165 aa3.12□□□□□ -1.91
CAF120YNL278W VPS16Q03308 798 aa3.12□□□□□ -1.91
CAF120YNL278W ENT2Q05785 613 aa3.12□□□□□ -1.91
CAF120YNL278W PBP2P38151 413 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
CAF120YNL278W MUM2P38236 366 aa3.12□□□□□ -1.91
CAF120YNL278W ORC6P38826 435 aa3.12□□□□□ -1.91
CAF120YNL278W CRG1P38892 291 aaRIP-Chip data3.12□□□□□ -1.91not detected
CAF120YNL278W MSH4P40965 878 aaPredicted RBP3.12□□□□□ -1.91
CAF120YNL278W COG4Q06096 861 aa3.12□□□□□ -1.91
CAF120YNL278W SNU66Q12420 587 aaPredicted RBP3.12□□□□□ -1.91
CAF120YNL278W PTC3P34221 468 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W PCS60P38137 543 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
CAF120YNL278W FAF1P40546 346 aaPredicted RBP3.12□□□□□ -1.91
CAF120YNL278W ESF2P53743 316 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W ALD6P54115 500 aaKnown RBP3.12□□□□□ -1.91
CAF120YNL278W CEF1Q03654 590 aaPredicted RBP3.12□□□□□ -1.91
CAF120YNL278W RBA50Q04418 439 aa3.12□□□□□ -1.91
CAF120YNL278W SPR28Q04921 423 aa3.12□□□□□ -1.91
CAF120YNL278W JIP5Q06214 492 aaPredicted RBP3.12□□□□□ -1.91
CAF120YNL278W TOS4Q06266 489 aa3.12□□□□□ -1.91
CAF120YNL278W BDF2Q07442 638 aa3.12□□□□□ -1.91
CAF120YNL278W HSP42Q12329 375 aa3.12□□□□□ -1.91
CAF120YNL278W FOB1O13329 566 aa3.11□□□□□ -1.91
CAF120YNL278W CKA2P19454 339 aa3.11□□□□□ -1.91
CAF120YNL278W OSM1P21375 501 aaKnown RBP3.11□□□□□ -1.91
CAF120YNL278W YJU3P28321 313 aa3.11□□□□□ -1.91
CAF120YNL278W TFG1P41895 735 aaPredicted RBP3.11□□□□□ -1.91
CAF120YNL278W YLR225CQ05948 407 aaKnown RBP3.11□□□□□ -1.91
CAF120YNL278W MRD1Q06106 887 aaKnown RBP3.11□□□□□ -1.91
CAF120YNL278W TDA5Q06417 326 aaKnown RBP3.11□□□□□ -1.91
CAF120YNL278W TRP5P00931 707 aaKnown RBP3.11□□□□□ -1.91
CAF120YNL278W TPD3P31383 635 aa3.11□□□□□ -1.91
CAF120YNL278W SEC6P32844 805 aa3.11□□□□□ -1.91
CAF120YNL278W YHR020WP38708 688 aaKnown RBP3.11□□□□□ -1.91
CAF120YNL278W SLN1P39928 1220 aaPredicted RBP3.11□□□□□ -1.91
CAF120YNL278W BUD16P39988 312 aa3.11□□□□□ -1.91
CAF120YNL278W ATH1P48016 1211 aa3.11□□□□□ -1.91
CAF120YNL278W YGL242CP53066 181 aa3.11□□□□□ -1.91
CAF120YNL278W HOS2P53096 452 aaPredicted RBP3.11□□□□□ -1.91
CAF120YNL278W UBP16Q02863 499 aa3.11□□□□□ -1.91
CAF120YNL278W EAF1Q06337 982 aa3.11□□□□□ -1.91
CAF120YNL278W PIN2Q12057 282 aa3.11□□□□□ -1.91
CAF120YNL278W TAH18Q12181 623 aa3.11□□□□□ -1.91
CAF120YNL278W CSR2Q12734 1121 aa3.11□□□□□ -1.91
CAF120YNL278W LAM4P38800 1345 aa3.11□□□□□ -1.91
CAF120YNL278W RAD3P06839 778 aa3.1□□□□□ -1.91
CAF120YNL278W VMA1P17255 1071 aaKnown RBP3.1□□□□□ -1.91
CAF120YNL278W RGR1P19263 1082 aa3.1□□□□□ -1.91
CAF120YNL278W PAH1P32567 862 aa3.1□□□□□ -1.91
CAF120YNL278W YBL036CP38197 257 aa3.1□□□□□ -1.91
CAF120YNL278W SOL3P38858 249 aa3.1□□□□□ -1.91
CAF120YNL278W PTK2P47116 818 aaKnown RBP3.1□□□□□ -1.91
CAF120YNL278W TGL2P54857 326 aa3.1□□□□□ -1.91
CAF120YNL278W CSI1Q04368 295 aa3.1□□□□□ -1.91
CAF120YNL278W YLR257WQ06146 321 aaKnown RBP3.1□□□□□ -1.91
CAF120YNL278W SKG3Q06315 1026 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms