RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	SAS3	P34218	831 aa		13.3	□□□□□ -0.28
CUE1	YMR264W	ADE17	P38009	592 aa	Known RBP	13.3	□□□□□ -0.28
CUE1	YMR264W	YBL028C	P38202	106 aa		13.3	□□□□□ -0.28
CUE1	YMR264W	STT3	P39007	718 aa	Known RBP	13.3	□□□□□ -0.28
CUE1	YMR264W	AAD16	Q02895	342 aa		13.3	□□□□□ -0.28
CUE1	YMR264W	TRS120	Q04183	1289 aa		13.3	□□□□□ -0.28
CUE1	YMR264W	GFD1	Q04839	188 aa	Known RBP	13.3	□□□□□ -0.28
CUE1	YMR264W	MNR2	P35724	969 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	CST26	P38226	397 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	VPS45	P38932	577 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	UTP7	P40055	554 aa	Known RBP	13.29	□□□□□ -0.28
CUE1	YMR264W	DAK2	P43550	591 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	MTC3	P53077	123 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	RET3	P53600	189 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	TMA16	Q08687	178 aa		13.29	□□□□□ -0.28
CUE1	YMR264W	KIN1	P13185	1064 aa		13.28	□□□□□ -0.28
CUE1	YMR264W	HIR1	P32479	840 aa		13.28	□□□□□ -0.28
CUE1	YMR264W	STV1	P37296	890 aa		13.28	□□□□□ -0.28
CUE1	YMR264W	TRM44	Q02648	567 aa	Known RBP	13.28	□□□□□ -0.28
CUE1	YMR264W	PMA1	P05030	918 aa	Known RBP	13.27	□□□□□ -0.29
CUE1	YMR264W	YGR153W	P48238	217 aa		13.27	□□□□□ -0.29
CUE1	YMR264W	ASE1	P50275	885 aa		13.27	□□□□□ -0.29
CUE1	YMR264W	DSE4	P53753	1117 aa		13.27	□□□□□ -0.29
CUE1	YMR264W	BNI5	P53890	448 aa	Known RBP	13.27	□□□□□ -0.29
CUE1	YMR264W	ATG20	Q07528	640 aa		13.27	□□□□□ -0.29
CUE1	YMR264W	SLK19	Q08581	821 aa	Known RBP	13.27	□□□□□ -0.29
CUE1	YMR264W	TUS1	Q06412	1307 aa		13.27	□□□□□ -0.29
CUE1	YMR264W	TUF1	P02992	437 aa	Known RBP	13.26	□□□□□ -0.29
CUE1	YMR264W	SAM2	P19358	384 aa	Known RBP	13.26	□□□□□ -0.29
CUE1	YMR264W	SEC20	P28791	383 aa		13.26	□□□□□ -0.29
CUE1	YMR264W	TPM2	P40414	161 aa		13.26	□□□□□ -0.29
CUE1	YMR264W	VPS4	P52917	437 aa		13.26	□□□□□ -0.29
CUE1	YMR264W	SNU71	P53207	620 aa	Known RBP	13.26	□□□□□ -0.29
CUE1	YMR264W	SDA1	P53313	767 aa	Known RBP	13.26	□□□□□ -0.29
CUE1	YMR264W	VPS75	P53853	264 aa		13.26	□□□□□ -0.29
CUE1	YMR264W	UBP9	P39967	754 aa		13.25	□□□□□ -0.29
CUE1	YMR264W	MGA2	P40578	1113 aa		13.25	□□□□□ -0.29
CUE1	YMR264W	UBA2	P52488	636 aa		13.25	□□□□□ -0.29
CUE1	YMR264W	CSM3	Q04659	317 aa		13.25	□□□□□ -0.29
CUE1	YMR264W	VIP1	Q06685	1146 aa	Known RBP	13.25	□□□□□ -0.29
CUE1	YMR264W	SPC110	P32380	944 aa		13.24	□□□□□ -0.29
CUE1	YMR264W	CIT3	P43635	486 aa		13.24	□□□□□ -0.29
CUE1	YMR264W	BCD1	P38772	366 aa		13.23	□□□□□ -0.29
CUE1	YMR264W	ATG32	P40458	529 aa		13.23	□□□□□ -0.29
CUE1	YMR264W	YGR237C	P50089	785 aa		13.23	□□□□□ -0.29
CUE1	YMR264W	LAP2	Q10740	671 aa		13.23	□□□□□ -0.29
CUE1	YMR264W	TUB2	P02557	457 aa	Known RBP	13.22	□□□□□ -0.29
CUE1	YMR264W	CDC37	P06101	506 aa	Known RBP	13.22	□□□□□ -0.29
CUE1	YMR264W	PDC1	P06169	563 aa	Known RBP	13.22	□□□□□ -0.29
CUE1	YMR264W	RPL8A	P17076	256 aa	Known RBP	13.22	□□□□□ -0.29
CUE1	YMR264W	RAD53	P22216	821 aa		13.22	□□□□□ -0.29
CUE1	YMR264W	SAP190	P36123	1033 aa		13.22	□□□□□ -0.29
CUE1	YMR264W	LSB1	P53281	241 aa		13.22	□□□□□ -0.29
CUE1	YMR264W	LSC2	P53312	427 aa		13.22	□□□□□ -0.29
CUE1	YMR264W	SUE1	Q06524	206 aa		13.22	□□□□□ -0.29
CUE1	YMR264W	GAP1	P19145	602 aa	Predicted RBP	13.21	□□□□□ -0.29
CUE1	YMR264W	MSH3	P25336	1018 aa		13.21	□□□□□ -0.29
CUE1	YMR264W	THI6	P41835	540 aa		13.21	□□□□□ -0.29
CUE1	YMR264W	VTC2	P43585	828 aa		13.21	□□□□□ -0.29
CUE1	YMR264W	STR2	P47164	639 aa		13.21	□□□□□ -0.29
CUE1	YMR264W	YCG1	Q06680	1035 aa		13.21	□□□□□ -0.29
CUE1	YMR264W	TLG2	Q08144	397 aa		13.21	□□□□□ -0.29
CUE1	YMR264W	PHO13	P19881	312 aa		13.2	□□□□□ -0.3
CUE1	YMR264W	MRC1	P25588	1096 aa		13.2	□□□□□ -0.3
CUE1	YMR264W	YET1	P35723	206 aa		13.2	□□□□□ -0.3
CUE1	YMR264W	ERG7	P38604	731 aa		13.2	□□□□□ -0.3
CUE1	YMR264W	KEL1	P38853	1164 aa	Known RBP	13.2	□□□□□ -0.3
CUE1	YMR264W	OSW7	P43611	510 aa		13.2	□□□□□ -0.3
CUE1	YMR264W	SPP382	Q06411	708 aa	Predicted RBP	13.2	□□□□□ -0.3
CUE1	YMR264W	FOB1	O13329	566 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	HPR1	P17629	752 aa	Known RBP	13.19	□□□□□ -0.3
CUE1	YMR264W	GSY1	P23337	708 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	GLC3	P32775	704 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	PET10	P36139	283 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	SPT8	P38915	602 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.19	□□□□□ -0.3	not detected
CUE1	YMR264W	SQS1	P53866	767 aa	Known RBP	13.19	□□□□□ -0.3
CUE1	YMR264W	HOS3	Q02959	697 aa	Known RBP	13.19	□□□□□ -0.3
CUE1	YMR264W	ADY4	Q05955	493 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	APL4	Q12028	832 aa		13.19	□□□□□ -0.3
CUE1	YMR264W	NOP58	Q12499	511 aa	Known RBP	13.19	□□□□□ -0.3
CUE1	YMR264W	CBP1	P07252	654 aa		13.18	□□□□□ -0.3
CUE1	YMR264W	SRO9	P25567	434 aa	Known RBP	13.18	□□□□□ -0.3
CUE1	YMR264W	PWP2	P25635	923 aa	Known RBP	13.18	□□□□□ -0.3
CUE1	YMR264W	SEC65	P29478	273 aa		13.18	□□□□□ -0.3
CUE1	YMR264W	PSO2	P30620	661 aa		13.18	□□□□□ -0.3
CUE1	YMR264W	CTM1	P38818	585 aa		13.18	□□□□□ -0.3
CUE1	YMR264W	EBS1	Q03466	884 aa	Known RBP	13.18	□□□□□ -0.3
CUE1	YMR264W	AIM33	Q04516	312 aa		13.18	□□□□□ -0.3
CUE1	YMR264W	UTP4	Q06679	776 aa	Known RBP	13.18	□□□□□ -0.3
CUE1	YMR264W	FKS1	P38631	1876 aa	Known RBP	13.17	□□□□□ -0.3
CUE1	YMR264W	CKA2	P19454	339 aa		13.17	□□□□□ -0.3
CUE1	YMR264W	ORC6	P38826	435 aa		13.17	□□□□□ -0.3
CUE1	YMR264W	TIF4631	P39935	952 aa	Known RBP	13.17	□□□□□ -0.3
CUE1	YMR264W	FET4	P40988	552 aa		13.17	□□□□□ -0.3
CUE1	YMR264W	AIP1	P46680	615 aa	Known RBP	13.17	□□□□□ -0.3
CUE1	YMR264W	FYV8	P46949	817 aa	Known RBP	13.17	□□□□□ -0.3
CUE1	YMR264W	YGR117C	P53270	476 aa		13.17	□□□□□ -0.3
CUE1	YMR264W	YGR273C	P53329	174 aa		13.17	□□□□□ -0.3
CUE1	YMR264W	FPK1	P53739	893 aa		13.17	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms