RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR046C	YMR046C	MNR2	P35724	969 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	SLS1	P42900	643 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	GCV1	P48015	400 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	FAR11	P53917	953 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	MEC3	Q02574	474 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	VPS16	Q03308	798 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	YMR074C	Q04773	145 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	MRL1	Q06815	381 aa		4.98	□□□□□ -1.61
YMR046C	YMR046C	VMA4	P22203	233 aa	Known RBP	4.97	□□□□□ -1.61
YMR046C	YMR046C	REI1	P38344	393 aa	Predicted RBP	4.97	□□□□□ -1.61
YMR046C	YMR046C	NEM1	P38757	446 aa		4.97	□□□□□ -1.61
YMR046C	YMR046C	NIT1	P40447	199 aa		4.97	□□□□□ -1.61
YMR046C	YMR046C	MTR4	P47047	1073 aa	Known RBP	4.97	□□□□□ -1.61
YMR046C	YMR046C	PIN2	Q12057	282 aa		4.97	□□□□□ -1.61
YMR046C	YMR046C	REC8	Q12188	680 aa		4.97	□□□□□ -1.61
YMR046C	YMR046C	YLL054C	Q12244	843 aa		4.97	□□□□□ -1.61
YMR046C	YMR046C	RDH54	P38086	958 aa		4.97	□□□□□ -1.61
YMR046C	YMR046C	KIP3	P53086	805 aa	Known RBP	4.97	□□□□□ -1.61
YMR046C	YMR046C	ALG6	Q12001	544 aa	Known RBP	4.97	□□□□□ -1.61
YMR046C	YMR046C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
YMR046C	YMR046C	TAF13	P11747	167 aa		4.96	□□□□□ -1.62
YMR046C	YMR046C	CDC34	P14682	295 aa		4.96	□□□□□ -1.62
YMR046C	YMR046C	MSB1	P21339	1137 aa	Known RBP	4.96	□□□□□ -1.62
YMR046C	YMR046C	ARL1	P38116	183 aa	Known RBP	4.96	□□□□□ -1.62
YMR046C	YMR046C	CWC24	P53769	259 aa		4.96	□□□□□ -1.62
YMR046C	YMR046C	ALD6	P54115	500 aa	Known RBP	4.96	□□□□□ -1.62
YMR046C	YMR046C	UTP5	Q04177	643 aa	Known RBP	4.96	□□□□□ -1.62
YMR046C	YMR046C	HDA2	Q06629	674 aa		4.96	□□□□□ -1.62
YMR046C	YMR046C	RTT10	Q08924	1013 aa		4.96	□□□□□ -1.62
YMR046C	YMR046C	DUT1	P33317	147 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	SEA4	P38164	1038 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	VAC8	P39968	578 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	GNP1	P48813	663 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	SDH1	Q00711	640 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	EST2	Q06163	884 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	ESC8	Q08119	714 aa		4.95	□□□□□ -1.62
YMR046C	YMR046C	DED1	P06634	604 aa	Known RBP	4.94	□□□□□ -1.62
YMR046C	YMR046C	RAD27	P26793	382 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	ADD66	P36040	267 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	POL12	P38121	705 aa	Predicted RBP	4.94	□□□□□ -1.62
YMR046C	YMR046C	ATG14	P38270	344 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	YNR063W	P53749	607 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	ROD1	Q02805	837 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	AVO1	Q08236	1176 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	YOR223W	Q12015	292 aa		4.94	□□□□□ -1.62
YMR046C	YMR046C	HXT13	P39924	564 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	FAA4	P47912	694 aa	Known RBP	4.93	□□□□□ -1.62
YMR046C	YMR046C	ECL1	P48235	211 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	YGR045C	P53229	120 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	NCE103	P53615	221 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	HXT17	P53631	564 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	SIW14	P53965	281 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	HXT15	P54854	567 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	GDE1	Q02979	1223 aa		4.93	□□□□□ -1.62
YMR046C	YMR046C	DOT1	Q04089	582 aa	Known RBP	4.93	□□□□□ -1.62
YMR046C	YMR046C	TMA46	Q12000	345 aa	Known RBP	4.93	□□□□□ -1.62
YMR046C	YMR046C	ELA1	P53861	379 aa	Predicted RBP	4.92	□□□□□ -1.62
YMR046C	YMR046C	GPT2	P36148	743 aa		4.91	□□□□□ -1.62
YMR046C	YMR046C	YAR028W	P39548	234 aa		4.91	□□□□□ -1.62
YMR046C	YMR046C	ENT3	P47160	408 aa		4.91	□□□□□ -1.62
YMR046C	YMR046C	PRP43	P53131	767 aa	Known RBP	4.91	□□□□□ -1.62
YMR046C	YMR046C	EEB1	Q02891	456 aa		4.91	□□□□□ -1.62
YMR046C	YMR046C	MKK2	P32491	506 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	RER2	P35196	286 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	TAF1	P46677	1066 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	YGR053C	P53234	283 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	RKM2	Q03942	479 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	LAP2	Q10740	671 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	DFG16	Q99234	619 aa		4.9	□□□□□ -1.63
YMR046C	YMR046C	GAS1	P22146	559 aa	Known RBP	4.89	□□□□□ -1.63
YMR046C	YMR046C	GIP4	P39732	760 aa		4.89	□□□□□ -1.63
YMR046C	YMR046C	RAT1	Q02792	1006 aa	Known RBP	4.89	□□□□□ -1.63
YMR046C	YMR046C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
YMR046C	YMR046C	SYP1	P25623	870 aa	Known RBP	4.88	□□□□□ -1.63
YMR046C	YMR046C	AFG2	P32794	780 aa		4.88	□□□□□ -1.63
YMR046C	YMR046C	HSE1	P38753	452 aa		4.88	□□□□□ -1.63
YMR046C	YMR046C	MSH4	P40965	878 aa	Predicted RBP	4.88	□□□□□ -1.63
YMR046C	YMR046C	WRS1	Q12109	432 aa	Known RBP	4.88	□□□□□ -1.63
YMR046C	YMR046C	TRP2	P00899	507 aa	Known RBP	4.87	□□□□□ -1.63
YMR046C	YMR046C	PRI2	P20457	528 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	LYP1	P32487	611 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	NNK1	P36003	928 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	ALG3	P38179	458 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	TYW3	P53177	273 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	GIC2	Q06648	383 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	FAL1	Q12099	399 aa	Known RBP	4.87	□□□□□ -1.63
YMR046C	YMR046C	PTC5	Q12511	572 aa		4.87	□□□□□ -1.63
YMR046C	YMR046C	BAS1	P22035	811 aa		4.86	□□□□□ -1.63
YMR046C	YMR046C	RET1	P22276	1149 aa	Known RBP	4.86	□□□□□ -1.63
YMR046C	YMR046C	NFS1	P25374	497 aa		4.86	□□□□□ -1.63
YMR046C	YMR046C	SMY2	P32909	740 aa	Known RBP	4.86	□□□□□ -1.63
YMR046C	YMR046C	VPS53	P47061	822 aa		4.86	□□□□□ -1.63
YMR046C	YMR046C	RSA3	Q05942	220 aa	Known RBP	4.86	□□□□□ -1.63
YMR046C	YMR046C	OPI10	Q08202	246 aa		4.86	□□□□□ -1.63
YMR046C	YMR046C	SSF2	Q12153	453 aa	Predicted RBP	4.86	□□□□□ -1.63
YMR046C	YMR046C	RPS4A	P0CX35	261 aa	Known RBP	4.85	□□□□□ -1.63
YMR046C	YMR046C	RPS4B	P0CX36	261 aa	Known RBP	4.85	□□□□□ -1.63
YMR046C	YMR046C	DBP5	P20449	482 aa	Known RBP	4.85	□□□□□ -1.63
YMR046C	YMR046C	QNS1	P38795	714 aa	Known RBP	4.85	□□□□□ -1.63
YMR046C	YMR046C	NMD3	P38861	518 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms