RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W SAM35P14693 329 aa7□□□□□ -1.29
CSI1YMR025W GCD6P32501 712 aaKnown RBP7□□□□□ -1.29
CSI1YMR025W VPS35P34110 944 aa7□□□□□ -1.29
CSI1YMR025W YHL012WP38709 493 aa7□□□□□ -1.29
CSI1YMR025W HSE1P38753 452 aa7□□□□□ -1.29
CSI1YMR025W ULP1Q02724 621 aa7□□□□□ -1.29
CSI1YMR025W PRP6P19735 899 aaPredicted RBP6.99□□□□□ -1.29
CSI1YMR025W TAF1P46677 1066 aa6.99□□□□□ -1.29
CSI1YMR025W YNR063WP53749 607 aa6.99□□□□□ -1.29
CSI1YMR025W LAP2Q10740 671 aa6.99□□□□□ -1.29
CSI1YMR025W KAR2P16474 682 aaKnown RBP6.98□□□□□ -1.29
CSI1YMR025W VMA4P22203 233 aaKnown RBP6.98□□□□□ -1.29
CSI1YMR025W SQT1P35184 431 aa6.98□□□□□ -1.29
CSI1YMR025W ATG14P38270 344 aa6.98□□□□□ -1.29
CSI1YMR025W ETP1P38748 585 aaKnown RBP6.98□□□□□ -1.29
CSI1YMR025W MRPL22P53881 309 aa6.98□□□□□ -1.29
CSI1YMR025W HRK1Q08732 759 aaKnown RBP6.98□□□□□ -1.29
CSI1YMR025W AIM3P38266 947 aaKnown RBP6.97□□□□□ -1.29
CSI1YMR025W PEX28P38848 579 aa6.97□□□□□ -1.29
CSI1YMR025W TOS4Q06266 489 aa6.97□□□□□ -1.29
CSI1YMR025W MET4P32389 672 aa6.96□□□□□ -1.3
CSI1YMR025W MDL2P33311 773 aa6.96□□□□□ -1.3
CSI1YMR025W SSF1P38789 453 aaPredicted RBP6.96□□□□□ -1.3
CSI1YMR025W DAK2P43550 591 aa6.96□□□□□ -1.3
CSI1YMR025W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
CSI1YMR025W GIP4P39732 760 aa6.95□□□□□ -1.3
CSI1YMR025W YJL045WP47052 634 aa6.95□□□□□ -1.3
CSI1YMR025W RDH54P38086 958 aa6.94□□□□□ -1.3
CSI1YMR025W QNS1P38795 714 aaKnown RBP6.94□□□□□ -1.3
CSI1YMR025W FLR1P38124 548 aa6.93□□□□□ -1.3
CSI1YMR025W PPX1P38698 397 aa6.93□□□□□ -1.3
CSI1YMR025W AIM26P32858 118 aa6.92□□□□□ -1.3
CSI1YMR025W FOL2P51601 243 aaKnown RBP6.92□□□□□ -1.3
CSI1YMR025W RIM8P53179 542 aa6.92□□□□□ -1.3
CSI1YMR025W OXR1Q08952 273 aa6.92□□□□□ -1.3
CSI1YMR025W HEM13P11353 328 aaKnown RBP6.91□□□□□ -1.3
CSI1YMR025W SRO9P25567 434 aaKnown RBP6.91□□□□□ -1.3
CSI1YMR025W ADD66P36040 267 aa6.91□□□□□ -1.3
CSI1YMR025W STM1P39015 273 aaKnown RBP6.91□□□□□ -1.3
CSI1YMR025W YGL140CP53120 1219 aa6.91□□□□□ -1.3
CSI1YMR025W ADI1Q03677 179 aa6.91□□□□□ -1.3
CSI1YMR025W RKM2Q03942 479 aa6.91□□□□□ -1.3
CSI1YMR025W MSC6Q08818 692 aaKnown RBP6.91□□□□□ -1.3
CSI1YMR025W WHI5Q12416 295 aa6.91□□□□□ -1.3
CSI1YMR025W YPL109CQ02981 657 aa6.9□□□□□ -1.3
CSI1YMR025W FAA3P39002 694 aa6.89□□□□□ -1.31
CSI1YMR025W THI12P42883 340 aa6.89□□□□□ -1.31
CSI1YMR025W THI5P43534 340 aa6.89□□□□□ -1.31
CSI1YMR025W VPS53P47061 822 aa6.89□□□□□ -1.31
CSI1YMR025W THI11P47183 340 aa6.89□□□□□ -1.31
CSI1YMR025W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
CSI1YMR025W THI13Q07748 340 aa6.89□□□□□ -1.31
CSI1YMR025W YSC84P32793 468 aa6.88□□□□□ -1.31
CSI1YMR025W SNO2P53823 222 aa6.88□□□□□ -1.31
CSI1YMR025W YPL277CQ08989 487 aa6.88□□□□□ -1.31
CSI1YMR025W SOD2P00447 233 aa6.87□□□□□ -1.31
CSI1YMR025W AFG2P32794 780 aa6.87□□□□□ -1.31
CSI1YMR025W EST2Q06163 884 aa6.87□□□□□ -1.31
CSI1YMR025W RSC58Q07979 502 aa6.87□□□□□ -1.31
CSI1YMR025W SEC23P15303 768 aaKnown RBP6.86□□□□□ -1.31
CSI1YMR025W TOD6P34219 525 aa6.86□□□□□ -1.31
CSI1YMR025W HXK1P04806 485 aaKnown RBP6.85□□□□□ -1.31
CSI1YMR025W RPS13P05756 151 aaKnown RBP6.85□□□□□ -1.31
CSI1YMR025W KIP1P28742 1111 aa6.85□□□□□ -1.31
CSI1YMR025W RPT1P33299 467 aaKnown RBP6.85□□□□□ -1.31
CSI1YMR025W PIC2P40035 300 aa6.85□□□□□ -1.31
CSI1YMR025W RCL1Q08096 367 aaPredicted RBP6.85□□□□□ -1.31
CSI1YMR025W NBA1Q08229 501 aaKnown RBP6.84□□□□□ -1.31
CSI1YMR025W SPS1P08458 490 aa6.83□□□□□ -1.32
CSI1YMR025W GPB2P39717 880 aa6.83□□□□□ -1.32
CSI1YMR025W HDA2Q06629 674 aa6.83□□□□□ -1.32
CSI1YMR025W COQ4O13525 335 aa6.82□□□□□ -1.32
CSI1YMR025W DED1P06634 604 aaKnown RBP6.82□□□□□ -1.32
CSI1YMR025W PTC5Q12511 572 aa6.82□□□□□ -1.32
CSI1YMR025W ALG3P38179 458 aa6.8□□□□□ -1.32
CSI1YMR025W HOS3Q02959 697 aaKnown RBP6.8□□□□□ -1.32
CSI1YMR025W SEC20P28791 383 aa6.79□□□□□ -1.32
CSI1YMR025W BAP2P38084 609 aa6.79□□□□□ -1.32
CSI1YMR025W CCZ1P38273 704 aa6.79□□□□□ -1.32
CSI1YMR025W IPL1P38991 367 aa6.79□□□□□ -1.32
CSI1YMR025W ENV11P53246 860 aa6.79□□□□□ -1.32
CSI1YMR025W TNA1P53322 534 aa6.79□□□□□ -1.32
CSI1YMR025W YDR132CQ03900 495 aa6.77□□□□□ -1.33
CSI1YMR025W CLU1Q03690 1277 aaKnown RBP6.76□□□□□ -1.33
CSI1YMR025W SGD1Q06132 899 aa6.76□□□□□ -1.33
CSI1YMR025W RSB1Q08417 382 aa6.76□□□□□ -1.33
CSI1YMR025W YOR352WQ08816 343 aa6.76□□□□□ -1.33
CSI1YMR025W YLR358CO13565 187 aa6.75□□□□□ -1.33
CSI1YMR025W TAF13P11747 167 aa6.75□□□□□ -1.33
CSI1YMR025W SNF5P18480 905 aa6.75□□□□□ -1.33
CSI1YMR025W PRE10P21242 288 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
CSI1YMR025W LAM1P38851 1228 aa6.75□□□□□ -1.33
CSI1YMR025W PIK1P39104 1066 aa6.75□□□□□ -1.33
CSI1YMR025W SEC26P41810 973 aaKnown RBP6.75□□□□□ -1.33
CSI1YMR025W YGR122WP53272 402 aa6.75□□□□□ -1.33
CSI1YMR025W RAT1Q02792 1006 aaKnown RBP6.75□□□□□ -1.33
CSI1YMR025W ROD1Q02805 837 aa6.75□□□□□ -1.33
CSI1YMR025W MCD1Q12158 566 aa6.75□□□□□ -1.33
CSI1YMR025W SPO21Q12411 609 aa6.75□□□□□ -1.33
CSI1YMR025W CYC1P00044 109 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms